FFCP PHASE1:Hg19::chr11:131781224..131781254,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:131781224..131781254,+ to FFCP PHASE1:Hg19::chr11:131781224..131781254,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50863 | |EntrezGene=50863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |HGNC=17941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000479431_5end | |||
|cluster_id=chr11:131781224..131781254,+ | |||
|coexpression_cluster_id=C2112 | |||
|description=CAGE_peak_5_at_NTM_5end | |||
|id=chr11:131781224..131781254,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.42e-27!180;CL:0000057!7.13e-17!75;CL:0000359!4.52e-14!32;CL:0000192!2.47e-13!42;CL:0000514!2.47e-13!42;CL:0000680!3.80e-13!57;CL:0000056!3.80e-13!57;CL:0000355!3.80e-13!57;CL:0000183!4.83e-12!59;CL:0000187!5.98e-12!54;CL:0000393!3.04e-10!60;CL:0000211!3.04e-10!60;CL:0002620!4.82e-08!23;CL:0002539!2.75e-07!10;CL:0000220!2.93e-07!246;CL:0002321!3.71e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.59e-15;32!CL:0000192;1.86e-09;43!CL:0002539;6.89e-09;10!CL:0002334;3.84e-08;12!CL:0000057;7.15e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.24e-18,76;CL:0000359,4.13e-15,32;CL:0000192,1.37e-12,43;CL:0000514,1.37e-12,43;CL:0000680,4.33e-12,58;CL:0000056,4.33e-12,58;CL:0000355,4.33e-12,58;CL:0000187,1.28e-10,55;CL:0002539,1.16e-08,10;CL:0000393,1.21e-08,61;CL:0000211,1.21e-08,61;CL:0002334,3.47e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.86e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!1.86e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.92e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.71e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.42e-22!365;UBERON:0000914!2.04e-18!83;UBERON:0002329!2.04e-18!83;UBERON:0003077!2.04e-18!83;UBERON:0003059!2.04e-18!83;UBERON:0007282!2.04e-18!83;UBERON:0009618!2.04e-18!83;UBERON:0007285!2.04e-18!83;UBERON:0000119!1.00e-16!312;UBERON:0000486!1.20e-16!82;UBERON:0000483!1.61e-16!309;UBERON:0004290!3.88e-14!70;UBERON:0000033!6.40e-13!123;UBERON:0001637!8.83e-13!42;UBERON:0003509!8.83e-13!42;UBERON:0004572!8.83e-13!42;UBERON:0001134!2.93e-12!61;UBERON:0002036!2.93e-12!61;UBERON:0003082!2.93e-12!61;UBERON:0000153!2.97e-12!129;UBERON:0007811!2.97e-12!129;UBERON:0000481!3.36e-12!347;UBERON:0002385!9.33e-12!63;UBERON:0001015!9.33e-12!63;UBERON:0000383!9.33e-12!63;UBERON:0000467!3.15e-11!625;UBERON:0000468!3.37e-11!659;UBERON:0000480!4.49e-11!626;UBERON:0005256!9.91e-11!143;UBERON:0004872!3.57e-10!84;UBERON:0000924!3.73e-10!173;UBERON:0006601!3.73e-10!173;UBERON:0004573!4.28e-10!33;UBERON:0004571!4.28e-10!33;UBERON:0002049!5.80e-10!79;UBERON:0007798!5.80e-10!79;UBERON:0000477!6.51e-10!286;UBERON:0004121!6.71e-10!169;UBERON:0003102!8.28e-10!95;UBERON:0001981!1.02e-09!60;UBERON:0007500!1.02e-09!60;UBERON:0004537!1.02e-09!60;UBERON:0006965!1.02e-09!60;UBERON:0000025!7.00e-09!194;UBERON:0004111!8.70e-09!241;UBERON:0002097!1.45e-08!40;UBERON:0002199!3.18e-08!45;UBERON:0002416!3.18e-08!45;UBERON:0000055!5.83e-08!69;UBERON:0000922!1.02e-07!612;UBERON:0002616!1.11e-07!59;UBERON:0000923!1.17e-07!604;UBERON:0005291!1.17e-07!604;UBERON:0006598!1.17e-07!604;UBERON:0002532!1.17e-07!604;UBERON:0002346!1.23e-07!90;UBERON:0000955!1.36e-07!69;UBERON:0006238!1.36e-07!69;UBERON:0002050!1.57e-07!605;UBERON:0005423!1.57e-07!605;UBERON:0003075!2.00e-07!86;UBERON:0007284!2.00e-07!86;UBERON:0004237!2.75e-07!10;UBERON:0004695!2.75e-07!10;UBERON:0002111!2.75e-07!10;UBERON:0004178!2.75e-07!10;UBERON:0001049!9.15e-07!57;UBERON:0005068!9.15e-07!57;UBERON:0006241!9.15e-07!57;UBERON:0007135!9.15e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.76e-09;33!UBERON:0004571;1.76e-09;33!UBERON:0011137;5.98e-09;11!UBERON:0010323;5.98e-09;11!UBERON:0004237;6.89e-09;10!UBERON:0004695;6.89e-09;10!UBERON:0002111;6.89e-09;10!UBERON:0004178;6.89e-09;10!UBERON:0001637;2.50e-08;42!UBERON:0003509;2.50e-08;42!UBERON:0004572;2.50e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.76e-15,83;UBERON:0007524,6.08e-13,73;UBERON:0003077,1.62e-12,72;UBERON:0007285,1.62e-12,72;UBERON:0002329,3.53e-12,71;UBERON:0003059,3.53e-12,71;UBERON:0007282,3.53e-12,71;UBERON:0004290,3.53e-12,71;UBERON:0009618,3.53e-12,71;UBERON:0001637,6.23e-12,42;UBERON:0003509,6.23e-12,42;UBERON:0004572,6.23e-12,42;UBERON:0007503,3.38e-11,78;UBERON:0001134,1.27e-10,62;UBERON:0002036,1.27e-10,62;UBERON:0003082,1.27e-10,62;UBERON:0004573,3.21e-10,33;UBERON:0004571,3.21e-10,33;UBERON:0002385,5.77e-10,64;UBERON:0001015,5.77e-10,64;UBERON:0000383,5.77e-10,64;UBERON:0003102,9.00e-10,99;UBERON:0000483,5.55e-09,306;UBERON:0010323,9.00e-09,11;UBERON:0010314,1.04e-08,132;UBERON:0004237,1.16e-08,10;UBERON:0004695,1.16e-08,10;UBERON:0002111,1.16e-08,10;UBERON:0004178,1.16e-08,10;UBERON:0000119,1.19e-08,309;UBERON:0004872,1.63e-08,83;UBERON:0007500,1.80e-07,59;UBERON:0001981,1.80e-07,59;UBERON:0004537,1.80e-07,59;UBERON:0006965,1.80e-07,59;UBERON:0002199,2.75e-07,46;UBERON:0002416,2.75e-07,46;UBERON:0002049,3.35e-07,78;UBERON:0007798,3.35e-07,78;UBERON:0002097,5.14e-07,41 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,6.99012390816551,23.7390280405608,0.247532705920093,0,4.03395087871065,12.0538905604795,8.03341099426111,9.27072317701963,0.492484232307152,3.67201244239655,0.313454721478088,0,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0.919421224478927,2.409647350226,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.579386075843295,0.795285947051099,0,2.45790524626576,3.54767035940102,2.98638271356629,0.0654895377488563,1.09288586487763,0.741568885568859,0,0,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,1.3082821564276,5.96366342034382,2.15271869829786,1.05927344650575,11.1866282092037,4.61068896857864,1.12135520028461,2.1349799145941,2.22000793575444,0,0.942974704487816,0,1.05950199351452,0.576175924479999,0.468642863667593,1.87296046098192,1.71141546463335,1.49448680551801,1.40921398372518,0.485618833104395,0.421352420106746,1.83738754129404,2.94802361548243,0.516628905878827,4.75201142912821,4.69807165629258,0,1.43723628363248,1.17835279767846,1.37630371859161,2.49357703935765,1.31693286264251,3.0648779579902,6.46023653298366,0.907457465280168,6.99619579186562,1.2813443329114,0.423863802319124,1.80054657650641,1.54578793857658,1.54584324027377,1.67505170698431,6.75105328965065,3.11798416515836,0.504867548488229,0.644349290496095,0,3.19508633264953,2.61955455391865,2.37384829234683,7.15065156704198,4.36393792945335,3.44165514466805,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,4.69348596989448,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,0,0,0,0,0,0,0,2.05881372358231,3.18275827685014,2.24803506515239,0.703702806881416,2.03694579348765,0,0,2.88662684050547,2.31860809950154,8.33601729074334,0,0,0,0,0,0,0,0,9.3733833986777,4.53551746136921,5.38745369521069,1.43293636324557,3.19697332365358,1.91691339582606,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0.411309970813294,0,0.285826432630578,0.897048674762886,0,0.8800594298514,9.82465039759111,0,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.718874566474748,0,18.5427976552934,2.46128221334885,1.2328579353023,3.58121926479791,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,0.415941723061614,1.42743191037729,2.20783381047509,1.63997980989798,1.80567659836631,4.5481500811197,0,0.664225598535437,1.65932251687533,3.30157734978715,0.391602314925481,0,0,0,0,0,3.32870879020994,8.76931850656073,2.72918588600655,2.76231551918512,1.96462066103151,1.28139149255701,1.02341449813341,2.73451665944133,0,5.08891989548763,6.21466038595945,2.38168752440047,5.71179872101983,4.06736324609857,0,7.61924587152482,0.368323955743585,0.229628896329213,0.910455840033585,0.131124414959424,1.80479845162965,0.847168708148562,0,1.46139224653261,0.844413031143006,1.13733384070897,0.510281115829547,0.431831832204279,0,0.541892875087706,1.00337954770971,0,0,1.79099803777743,0,0,0,0,0.325378394664303,0,0,0,4.59412430396938,2.60024098414608,3.21367859688319,5.60690166094307,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0,1.4245125703478,4.79326254546837,5.76570202095319,6.63586104971837,1.8208400553999,2.32422774648643,27.3886741742657,9.0614845120878,0.308033580176089,1.06461206063404,7.82939692867565,11.8607500226509,0.572499546967965,0,1.58189712359363,0.38126038784765,0.255897791311334,0,0.636406495851874,0,1.07923474549989,0.54907405947211,0.706874414074119,1.41527737101321,4.75530963519025,1.68503382495592,0,4.87426979262569,1.05650146756755,1.63799893689583,1.27264888758341,3.39024349860728,4.96228809191512,2.65375590096488,3.06915619677634,0,0,4.8698490471049,5.88664646389525,5.07052084558035,1.43411352204052,0.785992328104969,8.20343418406876,2.12856638442359,1.68886108238131,2.63435914367922,0,0.699869440489966,2.4055528181378,1.34060455107157,3.26672954583968,0,3.01353760869861,3.36942951335251,0.886860307073351,3.21612760289743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,5.34281784109948,0,0,0.398495976502139,0.276283915531148,0,1.22722419002586,0,5.90975216557434,0,0,0,0.197286811273867,0,1.11136990144637,0,0.834912883456661,1.99613798001194,0,0,0,0,0,0,0,1.16641845353302,0,0,0.241192877250816,18.30980835805,9.84155413387899,13.2996428529096,2.63262476584767,0,0,0,0.455768223388005,0,0,0,0,0.732780747214898,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,1.22429104652196,0.063186579628488,0.150323419414493,0.10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| ||
|short_description=p5@NTM | |||
}} | }} |
Latest revision as of 19:04, 16 September 2015
Short description: | p5@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NTM_5end |
Coexpression cluster: | C2112_Smooth_Amniotic_mesenchymal_Myoblast_Fibroblast_Lens_cerebellum |
Association with transcript: | -80bp_to_ENST00000479431_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.24e-18 | 76 |
vascular associated smooth muscle cell | 4.13e-15 | 32 |
smooth muscle cell | 1.37e-12 | 43 |
smooth muscle myoblast | 1.37e-12 | 43 |
muscle precursor cell | 4.33e-12 | 58 |
myoblast | 4.33e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.33e-12 | 58 |
muscle cell | 1.28e-10 | 55 |
aortic smooth muscle cell | 1.16e-08 | 10 |
electrically responsive cell | 1.21e-08 | 61 |
electrically active cell | 1.21e-08 | 61 |
preadipocyte | 3.47e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.71e-10 | 14 |