FFCP PHASE1:Hg19::chr16:48644061..48644141,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:48644061..48644141,-
|short_description=p1@N4BP1
|description=CAGE_peak_1_at_N4BP1_5end
|association_with_transcript=0bp_to_ENST00000262384,NM_153029,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9683 | |EntrezGene=9683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29850 | |HGNC=29850 | ||
|TSSclassifier=strong | |||
|UniProt=O75113 | |UniProt=O75113 | ||
|association_with_transcript=0bp_to_ENST00000262384,NM_153029,uc002efp.2_5end | |||
|cluster_id=chr16:48644061..48644141,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_N4BP1_5end | |||
|id=chr16:48644061..48644141,- | |||
|ontology_enrichment_celltype=CL:0000738!8.78e-29!140;CL:0002087!8.07e-22!119;CL:0002031!9.96e-22!124;CL:0000766!1.29e-21!76;CL:0002057!3.28e-20!42;CL:0000037!6.70e-19!172;CL:0000566!6.70e-19!172;CL:0000557!1.31e-18!71;CL:0002032!5.54e-18!165;CL:0000837!5.54e-18!165;CL:0002009!1.34e-17!65;CL:0000860!5.17e-17!45;CL:0002194!1.85e-16!63;CL:0000576!1.85e-16!63;CL:0000040!1.85e-16!63;CL:0000559!1.85e-16!63;CL:0000839!5.40e-16!70;CL:0000988!9.62e-16!182;CL:0000763!1.06e-12!112;CL:0000049!1.06e-12!112;CL:0000791!1.50e-08!18;CL:0000789!1.50e-08!18;CL:0002420!1.50e-08!18;CL:0002419!1.50e-08!18;CL:0000790!1.50e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.19e-18;33!CL:0002057;5.19e-18;33!CL:0000473;6.95e-16;39!CL:0000234;6.95e-16;39!CL:0000576;8.86e-13;48!CL:0000766;5.95e-11;69!CL:0000791;1.58e-08;18!CL:0000789;1.58e-08;18!CL:0002419;1.58e-08;18!CL:0002087;4.69e-08;104!CL:0000738;2.72e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.18e-31,136;CL:0000766,1.13e-24,72;CL:0002087,4.43e-24,115;CL:0002031,6.37e-24,120;CL:0000557,1.68e-21,67;CL:0000473,5.02e-21,48;CL:0000234,5.02e-21,48;CL:0002009,1.47e-20,61;CL:0000037,1.56e-20,168;CL:0000860,3.28e-20,42;CL:0002057,3.28e-20,42;CL:0002032,1.32e-19,161;CL:0000837,1.32e-19,161;CL:0002194,2.40e-19,59;CL:0000576,2.40e-19,59;CL:0000040,2.40e-19,59;CL:0000559,2.40e-19,59;CL:0000839,1.29e-18,66;CL:0000988,1.20e-17,177;CL:0000763,2.44e-14,108;CL:0000049,2.44e-14,108;CL:0000791,1.50e-08,18;CL:0000789,1.50e-08,18;CL:0002420,1.50e-08,18;CL:0002419,1.50e-08,18;CL:0000790,1.50e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-15;42!CL:0000790;1.58e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.43e-19!102;UBERON:0003061!1.43e-19!102;UBERON:0002193!1.49e-17!112;UBERON:0002371!5.45e-14!80;UBERON:0001474!1.95e-13!86;UBERON:0004765!1.03e-11!101;UBERON:0001434!1.03e-11!101;UBERON:0002405!3.01e-11!115;UBERON:0007023!5.28e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.73e-22,98;UBERON:0003061,6.73e-22,98;UBERON:0002193,1.38e-19,108;UBERON:0002371,3.62e-16,76;UBERON:0002405,1.13e-15,93;UBERON:0001474,1.87e-15,82;UBERON:0004765,3.43e-14,90;UBERON:0001434,2.08e-12,100;UBERON:0007023,7.31e-09,114 | |||
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|short_description=p1@N4BP1 | |||
}} | }} |
Latest revision as of 19:23, 16 September 2015
Short description: | p1@N4BP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_N4BP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000262384, NM_153029, uc002efp.2_5end |
EntrezGene: | N4BP1 |
HGNC: | 29850 |
UniProt: | O75113 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.18e-31 | 136 |
myeloid leukocyte | 1.13e-24 | 72 |
nongranular leukocyte | 4.43e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 6.37e-24 | 120 |
granulocyte monocyte progenitor cell | 1.68e-21 | 67 |
defensive cell | 5.02e-21 | 48 |
phagocyte | 5.02e-21 | 48 |
macrophage dendritic cell progenitor | 1.47e-20 | 61 |
hematopoietic stem cell | 1.56e-20 | 168 |
classical monocyte | 3.28e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.28e-20 | 42 |
hematopoietic oligopotent progenitor cell | 1.32e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-19 | 161 |
monopoietic cell | 2.40e-19 | 59 |
monocyte | 2.40e-19 | 59 |
monoblast | 2.40e-19 | 59 |
promonocyte | 2.40e-19 | 59 |
myeloid lineage restricted progenitor cell | 1.29e-18 | 66 |
hematopoietic cell | 1.20e-17 | 177 |
myeloid cell | 2.44e-14 | 108 |
common myeloid progenitor | 2.44e-14 | 108 |
mature alpha-beta T cell | 1.50e-08 | 18 |
alpha-beta T cell | 1.50e-08 | 18 |
immature T cell | 1.50e-08 | 18 |
mature T cell | 1.50e-08 | 18 |
immature alpha-beta T cell | 1.50e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.73e-22 | 98 |
blood island | 6.73e-22 | 98 |
hemolymphoid system | 1.38e-19 | 108 |
bone marrow | 3.62e-16 | 76 |
immune system | 1.13e-15 | 93 |
bone element | 1.87e-15 | 82 |
skeletal element | 3.43e-14 | 90 |
skeletal system | 2.08e-12 | 100 |
adult organism | 7.31e-09 | 114 |