FFCP PHASE1:Hg19::chr17:635911..635922,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:635911..635922,+
|short_description=p5@FAM57A
|description=CAGE_peak_5_at_FAM57A_5end
|association_with_transcript=-73bp_to_ENST00000451373_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79850 | |EntrezGene=79850 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29646 | |HGNC=29646 | ||
|TSSclassifier=strong | |||
|UniProt=E7EN42 | |UniProt=E7EN42 | ||
|association_with_transcript=-73bp_to_ENST00000451373_5end | |||
|cluster_id=chr17:635911..635922,+ | |||
|description=CAGE_peak_5_at_FAM57A_5end | |||
|id=chr17:635911..635922,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.14e-13!180;CL:0002321!1.97e-10!248;CL:0000220!2.84e-10!246;CL:0000680!5.74e-10!57;CL:0000056!5.74e-10!57;CL:0000355!5.74e-10!57;CL:0000192!8.75e-10!42;CL:0000514!8.75e-10!42;CL:0000183!3.47e-09!59;CL:0000393!4.87e-09!60;CL:0000211!4.87e-09!60;CL:0000187!1.13e-08!54;CL:0000222!3.88e-08!119;CL:0000548!1.01e-07!679;CL:0000004!1.01e-07!679;CL:0000255!1.01e-07!679;CL:0000012!3.30e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.48e-10;43!CL:0000359;2.25e-10;32!CL:0002595;9.18e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.68e-13,43;CL:0000514,2.68e-13,43;CL:0000680,9.02e-12,58;CL:0000056,9.02e-12,58;CL:0000355,9.02e-12,58;CL:0000359,2.47e-10,32;CL:0000393,5.72e-10,61;CL:0000211,5.72e-10,61;CL:0000187,3.31e-09,55;CL:0000222,5.85e-09,121;CL:0002321,2.77e-07,250;CL:0002595,5.88e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.48e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.94e-10!143;UBERON:0000486!9.77e-10!82;UBERON:0002385!5.32e-09!63;UBERON:0001015!5.32e-09!63;UBERON:0000383!5.32e-09!63;UBERON:0001134!7.00e-09!61;UBERON:0002036!7.00e-09!61;UBERON:0003082!7.00e-09!61;UBERON:0004290!1.91e-08!70;UBERON:0002100!2.36e-08!216;UBERON:0000914!7.43e-08!83;UBERON:0002329!7.43e-08!83;UBERON:0003077!7.43e-08!83;UBERON:0003059!7.43e-08!83;UBERON:0007282!7.43e-08!83;UBERON:0009618!7.43e-08!83;UBERON:0007285!7.43e-08!83;UBERON:0000490!1.32e-07!138;UBERON:0003104!1.43e-07!238;UBERON:0009142!1.43e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;9.18e-07;5!UBERON:0001533;9.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,9.19e-12,78;UBERON:0001134,1.11e-11,62;UBERON:0002036,1.11e-11,62;UBERON:0003082,1.11e-11,62;UBERON:0005256,2.66e-11,122;UBERON:0002385,4.11e-11,64;UBERON:0001015,4.11e-11,64;UBERON:0000383,4.11e-11,64;UBERON:0007524,7.68e-11,73;UBERON:0002329,2.73e-10,71;UBERON:0003059,2.73e-10,71;UBERON:0007282,2.73e-10,71;UBERON:0004290,2.73e-10,71;UBERON:0009618,2.73e-10,71;UBERON:0003077,4.68e-10,72;UBERON:0007285,4.68e-10,72;UBERON:0000486,1.45e-09,83;UBERON:0001637,2.72e-09,42;UBERON:0003509,2.72e-09,42;UBERON:0004572,2.72e-09,42;UBERON:0003104,5.78e-09,160;UBERON:0009142,5.78e-09,160;UBERON:0000490,2.07e-08,148;UBERON:0002100,6.62e-08,199;UBERON:0003834,5.88e-07,5;UBERON:0001533,5.88e-07,5 | |||
|phase1_expression=1.2717486548939,0.856402095563933,1.26858963686374,1.0007329835313,0.893922188854576,1.74467704820074,7.59899634504932,0,0.783556884599516,0,1.39560233594486,0.655324116390517,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0,0,0.984968464614303,0.612002073732759,0,0,0.273748850145768,0.125542639594803,0.382067028739756,0.246301768349837,0.236132343941038,0,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.767175371061182,1.0843174571537,2.50668955317945,0.869079113764942,0,1.94653948121054,0.189069634328136,0.221729397462564,0.351339142772504,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,1.38856200643038,0,2.09749718104953,1.37559020970034,0.208994966536811,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.446498641420399,0.44905874525234,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,1.98788780678127,0.12663051166458,0.397227542439656,0.573673241497627,0.354668382198357,0,1.06748995729705,0.74000264525148,1.55605517699883,0.269421344139376,0.326923806226917,0.454072282934794,0,0.234321431833797,0.312160076830321,0.570471821544449,1.04614076386261,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.368502951935304,0.103325781175765,0,0,0.910161361938026,0,0.505008341862199,0,0,0,0.30648779579902,0.600952235626387,0.340296549480063,0.358779271377724,0.85422955527427,1.27159140695737,0.300091096084402,0.618315175430633,0,0.744467425326359,1.35021065793013,0.974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.604512589365842,0.508681776931463,0.193260853163297,0.272746120590835,0.573609190778008,0.243947412259191,0.530119073285941,0.232387885739037,0.10366105501537,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.946454400318751,0.505754070234305,1.20505514941741,1.21323370005633,0.435758888184812,1.18635309555548,0.674156540800822,0.588664395376038,0,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,0.548751427043128,0,0.201057944823262,1.11106134190236,0,0,0,0,0.469634776943287,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0.335964256397719,0.141775097242386,0.626909658919938,0,0.383382679165211,0.492663237895943,0.352193736052904,0.829312462163088,0.144119953416961,0.50496973370552,0.507983154337352,0,0,1.71072446022705,0.411309970813294,0.600686115687835,0,0.336393253036082,0,0.2933531432838,1.55126058909333,3.57656445851882,1.690605505112,0.26593811658487,1.04007436911366,1.02882949704857,1.41849132023278,1.3321108950805,0.714889968290738,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0,0,0.599837947092342,0,0,0,0.479249710983165,0,0,1.44781306667579,1.84928690295345,1.07436577943937,0,0,0,0,2.03275699377971,0,2.31986643833309,0.502548796003046,1.91381625495949,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,1.03985430765404,2.14114786556594,0.473107245101804,0.117141414992713,1.20378439891088,0,2.0694614258501,1.32845119707087,1.47495334833363,0.173767228936166,0.783204629850962,0.686286847621712,0,0,0,0.303127571446259,0,0.30239029332968,0.992431231275107,0.767309866440312,2.24528075546459,0.640695746278505,1.53512174720011,0.321707842287215,0,0.462629081407967,1.59805552781814,0.657017248110473,0.519254429183621,0.464841513839837,0.241718899183244,1.60405176242628,0.276242966807689,1.26295892981067,1.0925470080403,0.917870904715969,0.451199612907412,0.539107359730903,0.784349769176855,0,0.316654886678627,0,0.510281115829547,1.0795795805107,4.62681758070868,0.812839312631559,0,0,0,0.671624264166535,0,0,0.512900250232778,2.62411716559765,0.325378394664303,0,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0.193341436584244,0.462145851343933,0.15350367472613,0.137836572484531,0.537101224341368,0.435050081742686,0.681813019328807,0.623224249527161,0.991709492165869,1.92190067365106,0.255225424989168,1.0115778085555,2.32422774648643,1.25924938732256,2.7881490806424,1.23213432070436,1.06461206063404,0.869932992075073,0.74129687641568,0.429374660225974,0,1.58189712359363,0.38126038784765,0.767693373934002,0,0.318203247925937,0,0.539617372749944,0.823611089208164,0.353437207037059,1.41527737101321,3.17020642346017,0.421258456238981,1.95053495635836,0,2.11300293513511,0.545999645631943,1.41405431953713,1.13008116620243,3.85955740482287,1.32687795048244,1.75380354101505,2.31510213706675,1.31178950409327,1.62328301570163,0.92947049429925,2.53526042279017,0,0.491245205065606,0.7133421029625,2.48332744849418,1.05553817648832,0.658589785919804,0.379473173765715,0,0.192444225451024,0,2.17781969722645,0,0.86101074534246,1.68471475667626,0.443430153536676,0.689170200620878,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| ||
|short_description=p5@FAM57A | |||
}} | }} |
Latest revision as of 20:57, 16 September 2015
Short description: | p5@FAM57A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM57A_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_ENST00000451373_5end |
EntrezGene: | FAM57A |
HGNC: | 29646 |
UniProt: | E7EN42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.68e-13 | 43 |
smooth muscle myoblast | 2.68e-13 | 43 |
muscle precursor cell | 9.02e-12 | 58 |
myoblast | 9.02e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.02e-12 | 58 |
vascular associated smooth muscle cell | 2.47e-10 | 32 |
electrically responsive cell | 5.72e-10 | 61 |
electrically active cell | 5.72e-10 | 61 |
muscle cell | 3.31e-09 | 55 |
mesodermal cell | 5.85e-09 | 121 |
embryonic cell | 2.77e-07 | 250 |
smooth muscle cell of the subclavian artery | 5.88e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 9.19e-12 | 78 |
skeletal muscle tissue | 1.11e-11 | 62 |
striated muscle tissue | 1.11e-11 | 62 |
myotome | 1.11e-11 | 62 |
trunk mesenchyme | 2.66e-11 | 122 |
muscle tissue | 4.11e-11 | 64 |
musculature | 4.11e-11 | 64 |
musculature of body | 4.11e-11 | 64 |
dense mesenchyme tissue | 7.68e-11 | 73 |
somite | 2.73e-10 | 71 |
presomitic mesoderm | 2.73e-10 | 71 |
presumptive segmental plate | 2.73e-10 | 71 |
dermomyotome | 2.73e-10 | 71 |
trunk paraxial mesoderm | 2.73e-10 | 71 |
paraxial mesoderm | 4.68e-10 | 72 |
presumptive paraxial mesoderm | 4.68e-10 | 72 |
multilaminar epithelium | 1.45e-09 | 83 |
artery | 2.72e-09 | 42 |
arterial blood vessel | 2.72e-09 | 42 |
arterial system | 2.72e-09 | 42 |
mesenchyme | 5.78e-09 | 160 |
entire embryonic mesenchyme | 5.78e-09 | 160 |
unilaminar epithelium | 2.07e-08 | 148 |
trunk | 6.62e-08 | 199 |
thoracic segment blood vessel | 5.88e-07 | 5 |
subclavian artery | 5.88e-07 | 5 |