FFCP PHASE1:Hg19::chr8:143867946..143867962,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:143867946..143867962,-
|short_description=p1@LY6D
|description=CAGE_peak_1_at_LY6D_5end
|association_with_transcript=-1bp_to_ENST00000518434_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8581 | |EntrezGene=8581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13348 | |HGNC=13348 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000518434_5end | |||
|cluster_id=chr8:143867946..143867962,- | |||
|coexpression_cluster_id=C3869 | |||
|description=CAGE_peak_1_at_LY6D_5end | |||
|id=chr8:143867946..143867962,- | |||
|ontology_enrichment_celltype=CL:0002076!4.14e-16!43;CL:0000223!5.01e-14!59;CL:0000066!1.25e-13!254;CL:0002368!1.27e-12!13;CL:0002251!2.87e-09!21;CL:0002202!6.55e-09!9;CL:0002632!6.55e-09!9;CL:0002159!1.42e-08!13;CL:0000622!6.99e-07!5;CL:0000244!9.99e-07!4;CL:0000731!9.99e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.69e-16;13!CL:0002076;4.48e-16;42!CL:0002251;2.80e-12;20!CL:0002202;9.79e-11;9!CL:0002632;9.79e-11;9!CL:0002159;2.90e-10;14!CL:0000622;6.74e-10;5!CL:0000244;1.04e-09;4!CL:0000731;1.04e-09;4!CL:0000154;3.56e-08;6!CL:0002621;2.14e-07;3!CL:0002328;2.81e-07;3!CL:0000307;8.85e-07;3!CL:0002623;9.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.07e-21,42;CL:0002368,1.70e-16,13;CL:0000223,6.31e-15,58;CL:0002251,2.68e-12,20;CL:0000066,7.72e-11,253;CL:0002202,9.64e-11,9;CL:0002632,9.64e-11,9;CL:0002159,2.69e-10,14;CL:0000622,5.94e-10,5;CL:0000244,1.04e-09,4;CL:0000731,1.04e-09,4;CL:0000154,3.21e-08,6;CL:0002621,2.16e-07,3;CL:0002328,2.84e-07,3;CL:0000068,8.59e-07,3;CL:0000069,8.59e-07,3;CL:0000307,8.59e-07,3;CL:0000377,8.59e-07,3;CL:0002623,8.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.33e-08;58!CL:0000377;8.85e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.90e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.17e-17!169;UBERON:0000925!1.17e-17!169;UBERON:0006595!1.17e-17!169;UBERON:0001004!1.26e-14!72;UBERON:0001007!2.15e-13!155;UBERON:0001555!2.15e-13!155;UBERON:0007026!2.15e-13!155;UBERON:0000166!6.03e-11!21;UBERON:0000161!9.19e-11!35;UBERON:0004921!8.18e-10!129;UBERON:0004185!8.18e-10!129;UBERON:0000077!1.77e-09!130;UBERON:0000065!4.48e-09!53;UBERON:0001041!5.44e-09!98;UBERON:0000165!2.66e-08!28;UBERON:0000930!2.66e-08!28;UBERON:0007196!3.34e-08!14;UBERON:0001558!3.34e-08!14;UBERON:0000365!1.15e-07!5;UBERON:0001044!1.44e-07!6;UBERON:0003293!1.44e-07!6;UBERON:0003294!1.44e-07!6;UBERON:0010047!1.44e-07!6;UBERON:0000167!1.44e-07!6;UBERON:0003408!3.30e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.66e-11;5!UBERON:0000165;3.74e-11;28!UBERON:0000486;1.14e-10;12!UBERON:0000161;1.35e-10;19!UBERON:0000166;1.35e-10;19!UBERON:0007196;6.44e-10;15!UBERON:0001558;6.44e-10;15!UBERON:0005910;3.30e-09;6!UBERON:0001041;2.61e-08;14!UBERON:0001044;4.38e-08;6!UBERON:0003293;4.38e-08;6!UBERON:0003294;4.38e-08;6!UBERON:0010047;4.38e-08;6!UBERON:0003408;4.38e-08;6!UBERON:0000167;4.38e-08;6!UBERON:0001949;2.14e-07;3!UBERON:0003126;2.26e-07;7!UBERON:0001005;2.26e-07;7!UBERON:0004815;2.81e-07;3!UBERON:0002031;2.81e-07;3!UBERON:0005178;6.67e-07;34!UBERON:0002224;6.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.07e-16,74;UBERON:0004119,5.86e-16,160;UBERON:0000925,5.86e-16,160;UBERON:0006595,5.86e-16,160;UBERON:0000161,1.84e-13,36;UBERON:0000166,5.16e-13,22;UBERON:0000365,3.52e-11,5;UBERON:0000165,1.15e-10,29;UBERON:0000930,1.15e-10,29;UBERON:0001007,1.79e-10,145;UBERON:0001555,1.79e-10,145;UBERON:0007026,1.79e-10,145;UBERON:0003102,4.30e-10,99;UBERON:0000153,4.58e-10,62;UBERON:0007811,4.58e-10,62;UBERON:0007196,6.26e-10,15;UBERON:0001558,6.26e-10,15;UBERON:0000065,7.17e-10,54;UBERON:0005910,3.19e-09,6;UBERON:0003408,1.14e-08,10;UBERON:0001041,2.73e-08,87;UBERON:0000033,2.77e-08,56;UBERON:0001044,3.89e-08,6;UBERON:0003293,3.89e-08,6;UBERON:0003294,3.89e-08,6;UBERON:0010047,3.89e-08,6;UBERON:0000167,3.89e-08,6;UBERON:0004921,3.90e-08,118;UBERON:0001444,5.50e-08,49;UBERON:0005178,1.55e-07,34;UBERON:0002224,1.55e-07,34;UBERON:0001949,2.16e-07,3;UBERON:0003126,2.17e-07,7;UBERON:0001005,2.17e-07,7;UBERON:0004815,2.84e-07,3;UBERON:0002031,2.84e-07,3;UBERON:0005181,3.12e-07,35 | |||
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| ||
|short_description=p1@LY6D | |||
}} | }} |
Latest revision as of 21:32, 16 September 2015
Short description: | p1@LY6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LY6D_5end |
Coexpression cluster: | C3869_tongue_epidermoid_esophagus_Urothelial_Corneal_cervical_throat |
Association with transcript: | -1bp_to_ENST00000518434_5end |
EntrezGene: | LY6D |
HGNC: | 13348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.07e-21 | 42 |
respiratory epithelial cell | 1.70e-16 | 13 |
endodermal cell | 6.31e-15 | 58 |
epithelial cell of alimentary canal | 2.68e-12 | 20 |
epithelial cell | 7.72e-11 | 253 |
epithelial cell of tracheobronchial tree | 9.64e-11 | 9 |
epithelial cell of lower respiratory tract | 9.64e-11 | 9 |
general ecto-epithelial cell | 2.69e-10 | 14 |
acinar cell | 5.94e-10 | 5 |
transitional epithelial cell | 1.04e-09 | 4 |
urothelial cell | 1.04e-09 | 4 |
protein secreting cell | 3.21e-08 | 6 |
gingival epithelial cell | 2.16e-07 | 3 |
bronchial epithelial cell | 2.84e-07 | 3 |
duct epithelial cell | 8.59e-07 | 3 |
branched duct epithelial cell | 8.59e-07 | 3 |
tracheal epithelial cell | 8.59e-07 | 3 |
tracheoblast | 8.59e-07 | 3 |
acinar cell of salivary gland | 8.77e-07 | 3 |