FFCP PHASE1:Hg19::chr12:122018114..122018137,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:122018114..122018137,-
|short_description=p8@KDM2B
|description=CAGE_peak_8_at_KDM2B_5end
|association_with_transcript=0bp_to_ENST00000539394_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84678 | |EntrezGene=84678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13610 | |HGNC=13610 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXC2 | |UniProt=F5GXC2 | ||
|association_with_transcript=0bp_to_ENST00000539394_5end | |||
|cluster_id=chr12:122018114..122018137,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_8_at_KDM2B_5end | |||
|id=chr12:122018114..122018137,- | |||
|ontology_enrichment_celltype=CL:0000838!1.95e-12!52;CL:0000542!5.75e-12!53;CL:0000051!5.75e-12!53;CL:0000738!1.57e-10!140;CL:0002087!5.55e-09!119;CL:0000084!1.33e-08!25;CL:0000827!1.33e-08!25;CL:0000791!1.54e-08!18;CL:0000789!1.54e-08!18;CL:0002420!1.54e-08!18;CL:0002419!1.54e-08!18;CL:0000790!1.54e-08!18;CL:0000988!1.86e-08!182;CL:0000037!3.62e-08!172;CL:0000566!3.62e-08!172;CL:0002032!2.14e-07!165;CL:0000837!2.14e-07!165;CL:0002031!3.02e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.32e-19;5!CL:0000623;2.70e-11;3!CL:0000791;8.80e-11;18!CL:0000789;8.80e-11;18!CL:0002419;8.80e-11;18!CL:0000084;2.47e-09;25!CL:0000624;3.04e-09;6!CL:0000039;1.26e-08;7!CL:0000586;1.26e-08;7!CL:0000453;4.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.43e-19,5;CL:0000623,1.84e-11,3;CL:0000825,1.84e-11,3;CL:0000791,7.27e-11,18;CL:0000789,7.27e-11,18;CL:0002420,7.27e-11,18;CL:0002419,7.27e-11,18;CL:0000790,7.27e-11,18;CL:0000084,2.36e-09,25;CL:0000827,2.36e-09,25;CL:0000624,2.99e-09,6;CL:0000039,9.35e-09,7;CL:0000586,9.35e-09,7;CL:0000838,3.06e-08,52;CL:0000542,4.93e-08,53;CL:0000051,4.93e-08,53;CL:0000738,1.83e-07,136;CL:0000453,4.32e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.10e-17;10!UBERON:0005564;5.10e-17;10!CL:0000790;8.80e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.14e-16;8!UBERON:0003135;2.40e-11;11!UBERON:0000991;1.54e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.23e-16,8;UBERON:0003135,1.65e-11,11;UBERON:0000991,1.25e-07,21;UBERON:0009196,1.25e-07,21;UBERON:0009117,1.25e-07,21;UBERON:0005564,1.25e-07,21;UBERON:0004176,3.11e-07,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.305653622991805,0.246301768349837,0.314843125254717,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0,0.309868802321207,0.284338464974843,0,1.10799081706375,1.00272223735071,0.434021741431704,0.447830948479849,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0.962787081228281,0,0,0.398927315243264,0,0,0,0,0.251248665256743,1.0429658368404,0,0,0,0.632924774881769,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0.587237189370939,1.52909291250092,1.32171328579026,0,0,1.180258620683,0.393010762749165,1.23360899399706,0.334372990781356,0.32592226663359,0.473447805734733,1.94826728407911,1.00269411196656,2.3568472597987,1.55073726208535,1.08321545506006,1.28091319725675,0.650296737799391,0.657751618414705,0.276350017785848,0.289803085735052,0.593146252648242,0,0,1.0197840842781,1.53288197440768,1.03088233644789,1.01207876807801,0.318565414324097,0.651083453856419,0,0.150575119077773,0.255973222308837,0,1.18388626022008,0,2.01606743224732,1.87208137048455,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,2.63560834872127,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0.161646056818812,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0,0,13.6610550865147,10.6023814657188,17.5452853732973,9.22583389636797,14.8869302016621,6.56959246336494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,2.1673383622212,3.01878604803324,1.79680250791648,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0.206768026122887,1.2942852049117,1.28073069364133,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.362578348774867,0.40101294060657,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0.247528499761764,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0.28853842595289,0.142283686696828,0.478278818186467,0.199579371432817,0.191505370132367,1.05836791361941,0,0,0,0,0,0.846458889008016,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0.755798243562828,0.102268682502155,0.369254416383208,0,0.179736702294654,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.46112780877612,0.0897576444097721,0.434589487688032,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,1.55488378577335,0,0,0,0,1.18608451472249,0.494255755786011,0.835375596043643,0.269604531922708,2.40773294189637,0,0.547364367646998,0.19566461893209,0,0,0,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0.273810757783986,0,0,1.05154941711726,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.13480708770837,0,0.169346664131569,0,0,7.87690427478594,10.590536617987,10.8014487887588,0.2249738915515,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.443716206147409,0.124192805882767,0.830091809617385,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,2.72804432375144,2.12583744501381,2.45348091383766,0,0.491545817507439,0,0.39997479170986,0,0,0,0,0.139879507719444,0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| ||
|short_description=p8@KDM2B | |||
}} | }} |
Latest revision as of 22:12, 16 September 2015
Short description: | p8@KDM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KDM2B_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000539394_5end |
EntrezGene: | KDM2B |
HGNC: | 13610 |
UniProt: | F5GXC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.43e-19 | 5 |
natural killer cell | 1.84e-11 | 3 |
pro-NK cell | 1.84e-11 | 3 |
mature alpha-beta T cell | 7.27e-11 | 18 |
alpha-beta T cell | 7.27e-11 | 18 |
immature T cell | 7.27e-11 | 18 |
mature T cell | 7.27e-11 | 18 |
immature alpha-beta T cell | 7.27e-11 | 18 |
T cell | 2.36e-09 | 25 |
pro-T cell | 2.36e-09 | 25 |
CD4-positive, alpha-beta T cell | 2.99e-09 | 6 |
germ line cell | 9.35e-09 | 7 |
germ cell | 9.35e-09 | 7 |
lymphoid lineage restricted progenitor cell | 3.06e-08 | 52 |
lymphocyte | 4.93e-08 | 53 |
common lymphoid progenitor | 4.93e-08 | 53 |
leukocyte | 1.83e-07 | 136 |
Langerhans cell | 4.32e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 4.23e-16 | 8 |
male reproductive organ | 1.65e-11 | 11 |
gonad | 1.25e-07 | 21 |
indifferent external genitalia | 1.25e-07 | 21 |
indifferent gonad | 1.25e-07 | 21 |
gonad primordium | 1.25e-07 | 21 |
external genitalia | 3.11e-07 | 22 |