FFCP PHASE1:Hg19::chr10:126294007..126294018,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=64077 | |EntrezGene=64077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=30042 | |HGNC=30042 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=237bp_to_uc009yaj.1_5end | |association_with_transcript=237bp_to_uc009yaj.1_5end | ||
|cluster_id=chr10:126294007..126294018,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_7_at_LHPP_5end | |description=CAGE_peak_7_at_LHPP_5end | ||
Latest revision as of 22:23, 16 September 2015
| Short description: | p7@LHPP |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_LHPP_5end |
| Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
| Association with transcript: | 237bp_to_uc009yaj.1_5end |
| EntrezGene: | LHPP |
| HGNC: | 30042 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p7@LHPP |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 9.12e-89 | 56 |
| neural rod | 9.12e-89 | 56 |
| future spinal cord | 9.12e-89 | 56 |
| neural keel | 9.12e-89 | 56 |
| regional part of nervous system | 9.06e-82 | 53 |
| regional part of brain | 9.06e-82 | 53 |
| brain | 4.34e-71 | 68 |
| future brain | 4.34e-71 | 68 |
| central nervous system | 1.72e-67 | 81 |
| regional part of forebrain | 6.05e-67 | 41 |
Showing 1 to 10 of 99 entries
