FFCP PHASE1:Hg19::chr20:4990931..4990943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9962 | |EntrezGene=9962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10973 | |HGNC=10973 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGH3 | |UniProt=Q9UGH3 | ||
|association_with_transcript=0bp_to_ENST00000379333,NM_203327,uc002wlh.1,uc002wli.2_5end | |association_with_transcript=0bp_to_ENST00000379333,NM_203327,uc002wlh.1,uc002wli.2_5end | ||
|cluster_id=chr20:4990931..4990943,- | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_6_at_SLC23A2_5end | |description=CAGE_peak_6_at_SLC23A2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002194!3.72e-44!63;CL:0000576!3.72e-44!63;CL:0000040!3.72e-44!63;CL:0000559!3.72e-44!63;CL:0002009!1.94e-42!65;CL:0000839!1.43e-38!70;CL:0000557!7.30e-38!71;CL:0000766!1.78e-36!76;CL:0002057!9.79e-36!42;CL:0000860!9.52e-33!45;CL:0000763!7.82e-25!112;CL:0000049!7.82e-25!112;CL:0000738!4.87e-22!140;CL:0002087!1.37e-21!119;CL:0002031!4.24e-19!124;CL:0000037!1.91e-16!172;CL:0000566!1.91e-16!172;CL:0000988!7.95e-15!182;CL:0002032!8.71e-15!165;CL:0000837!8.71e-15!165;CL:0000039!1.19e-14!7;CL:0000586!1.19e-14!7;CL:0002619!2.89e-08!3;CL:0000148!1.41e-07!10;CL:0000541!1.41e-07!10;CL:0000784!4.79e-07!3 | |ontology_enrichment_celltype=CL:0002194!3.72e-44!63;CL:0000576!3.72e-44!63;CL:0000040!3.72e-44!63;CL:0000559!3.72e-44!63;CL:0002009!1.94e-42!65;CL:0000839!1.43e-38!70;CL:0000557!7.30e-38!71;CL:0000766!1.78e-36!76;CL:0002057!9.79e-36!42;CL:0000860!9.52e-33!45;CL:0000763!7.82e-25!112;CL:0000049!7.82e-25!112;CL:0000738!4.87e-22!140;CL:0002087!1.37e-21!119;CL:0002031!4.24e-19!124;CL:0000037!1.91e-16!172;CL:0000566!1.91e-16!172;CL:0000988!7.95e-15!182;CL:0002032!8.71e-15!165;CL:0000837!8.71e-15!165;CL:0000039!1.19e-14!7;CL:0000586!1.19e-14!7;CL:0002619!2.89e-08!3;CL:0000148!1.41e-07!10;CL:0000541!1.41e-07!10;CL:0000784!4.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.83e-24;39!CL:0000234;3.83e-24;39!CL:0002619;1.01e-21;3!CL:0000576;4.34e-19;48!CL:0000235;1.69e-18;6!CL:0000860;4.82e-17;33!CL:0002057;4.82e-17;33!CL:0000766;5.32e-13;69!CL:0002567;3.65e-10;3!CL:0000763;9.87e-07;100 | |ontology_enrichment_celltype_v019=CL:0000473;3.83e-24;39!CL:0000234;3.83e-24;39!CL:0002619;1.01e-21;3!CL:0000576;4.34e-19;48!CL:0000235;1.69e-18;6!CL:0000860;4.82e-17;33!CL:0002057;4.82e-17;33!CL:0000766;5.32e-13;69!CL:0002567;3.65e-10;3!CL:0000763;9.87e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.13e-32,59;CL:0000576,2.13e-32,59;CL:0000040,2.13e-32,59;CL:0000559,2.13e-32,59;CL:0002009,3.07e-31,61;CL:0000839,1.21e-28,66;CL:0000557,3.61e-28,67;CL:0000473,5.94e-28,48;CL:0000234,5.94e-28,48;CL:0000766,5.37e-26,72;CL:0002619,9.13e-22,3;CL:0000235,1.48e-18,6;CL:0002087,5.17e-17,115;CL:0000860,8.26e-17,42;CL:0002057,8.26e-17,42;CL:0000763,3.13e-16,108;CL:0000049,3.13e-16,108;CL:0002031,3.73e-16,120;CL:0000738,1.60e-15,136;CL:0000037,7.77e-12,168;CL:0002032,4.11e-11,161;CL:0000837,4.11e-11,161;CL:0000988,4.88e-11,177;CL:0002567,3.65e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.73e-14;42!CL:0000049;7.52e-07;108 | |ontology_enrichment_development_v019=CL:0002057;8.73e-14;42!CL:0000049;7.52e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.04e-08;1!DOID:10165;2.04e-08;1!DOID:1798;2.04e-08;1 | |ontology_enrichment_disease_v019=DOID:1799;2.04e-08;1!DOID:10165;2.04e-08;1!DOID:1798;2.04e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,2.19e-08,1;DOID:10165,2.19e-08,1;DOID:1798,2.19e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.75e-32!80;UBERON:0002405!6.06e-32!115;UBERON:0001474!3.20e-29!86;UBERON:0002390!2.09e-27!102;UBERON:0003061!2.09e-27!102;UBERON:0002193!1.45e-26!112;UBERON:0004765!3.63e-23!101;UBERON:0001434!3.63e-23!101;UBERON:0002204!1.90e-10!167;UBERON:0003081!1.65e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!2.75e-32!80;UBERON:0002405!6.06e-32!115;UBERON:0001474!3.20e-29!86;UBERON:0002390!2.09e-27!102;UBERON:0003061!2.09e-27!102;UBERON:0002193!1.45e-26!112;UBERON:0004765!3.63e-23!101;UBERON:0001434!3.63e-23!101;UBERON:0002204!1.90e-10!167;UBERON:0003081!1.65e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-24,76;UBERON:0002405,2.21e-24,93;UBERON:0002390,5.93e-23,98;UBERON:0003061,5.93e-23,98;UBERON:0001474,1.96e-22,82;UBERON:0002193,1.74e-20,108;UBERON:0004765,3.78e-20,90;UBERON:0001434,8.44e-18,100;UBERON:0002106,9.81e-10,3;UBERON:0004854,9.81e-10,3;UBERON:0009034,9.81e-10,3;UBERON:0002095,9.81e-10,3;UBERON:0004782,9.81e-10,3;UBERON:0003281,9.81e-10,3;UBERON:0009664,9.81e-10,3;UBERON:0002296,9.81e-10,3;UBERON:0005602,9.81e-10,3;UBERON:0001179,9.81e-10,3;UBERON:0006293,9.81e-10,3;UBERON:0002204,2.79e-09,167;UBERON:0003081,4.12e-09,203 | |||
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| ||
|short_description=p6@SLC23A2 | |short_description=p6@SLC23A2 | ||
}} | }} |
Latest revision as of 22:55, 16 September 2015
Short description: | p6@SLC23A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC23A2_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 0bp_to_ENST00000379333, NM_203327, uc002wlh.1, uc002wli.2_5end |
EntrezGene: | SLC23A2 |
HGNC: | 10973 |
UniProt: | Q9UGH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.13e-32 | 59 |
monocyte | 2.13e-32 | 59 |
monoblast | 2.13e-32 | 59 |
promonocyte | 2.13e-32 | 59 |
macrophage dendritic cell progenitor | 3.07e-31 | 61 |
myeloid lineage restricted progenitor cell | 1.21e-28 | 66 |
granulocyte monocyte progenitor cell | 3.61e-28 | 67 |
defensive cell | 5.94e-28 | 48 |
phagocyte | 5.94e-28 | 48 |
myeloid leukocyte | 5.37e-26 | 72 |
adult endothelial progenitor cell | 9.13e-22 | 3 |
macrophage | 1.48e-18 | 6 |
nongranular leukocyte | 5.17e-17 | 115 |
classical monocyte | 8.26e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.26e-17 | 42 |
myeloid cell | 3.13e-16 | 108 |
common myeloid progenitor | 3.13e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 3.73e-16 | 120 |
leukocyte | 1.60e-15 | 136 |
hematopoietic stem cell | 7.77e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.11e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.11e-11 | 161 |
hematopoietic cell | 4.88e-11 | 177 |
light melanocyte | 3.65e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-24 | 76 |
immune system | 2.21e-24 | 93 |
hematopoietic system | 5.93e-23 | 98 |
blood island | 5.93e-23 | 98 |
bone element | 1.96e-22 | 82 |
hemolymphoid system | 1.74e-20 | 108 |
skeletal element | 3.78e-20 | 90 |
skeletal system | 8.44e-18 | 100 |
spleen | 9.81e-10 | 3 |
gastrointestinal system mesentery | 9.81e-10 | 3 |
stomach region | 9.81e-10 | 3 |
mesentery | 9.81e-10 | 3 |
gastrointestinal system serosa | 9.81e-10 | 3 |
mesentery of stomach | 9.81e-10 | 3 |
gut mesentery | 9.81e-10 | 3 |
dorsal mesentery | 9.81e-10 | 3 |
dorsal mesogastrium | 9.81e-10 | 3 |
peritoneal cavity | 9.81e-10 | 3 |
spleen primordium | 9.81e-10 | 3 |
musculoskeletal system | 2.79e-09 | 167 |
lateral plate mesoderm | 4.12e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.19e-08 | 1 |
endocrine pancreas cancer | 2.19e-08 | 1 |
pancreatic endocrine carcinoma | 2.19e-08 | 1 |