FFCP PHASE1:Hg19::chr20:4990931..4990943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9962 | |EntrezGene=9962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10973 | |HGNC=10973 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGH3 | |UniProt=Q9UGH3 | ||
|association_with_transcript=0bp_to_ENST00000379333,NM_203327,uc002wlh.1,uc002wli.2_5end | |||
|cluster_id=chr20:4990931..4990943,- | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_6_at_SLC23A2_5end | |||
|id=chr20:4990931..4990943,- | |||
|ontology_enrichment_celltype=CL:0002194!3.72e-44!63;CL:0000576!3.72e-44!63;CL:0000040!3.72e-44!63;CL:0000559!3.72e-44!63;CL:0002009!1.94e-42!65;CL:0000839!1.43e-38!70;CL:0000557!7.30e-38!71;CL:0000766!1.78e-36!76;CL:0002057!9.79e-36!42;CL:0000860!9.52e-33!45;CL:0000763!7.82e-25!112;CL:0000049!7.82e-25!112;CL:0000738!4.87e-22!140;CL:0002087!1.37e-21!119;CL:0002031!4.24e-19!124;CL:0000037!1.91e-16!172;CL:0000566!1.91e-16!172;CL:0000988!7.95e-15!182;CL:0002032!8.71e-15!165;CL:0000837!8.71e-15!165;CL:0000039!1.19e-14!7;CL:0000586!1.19e-14!7;CL:0002619!2.89e-08!3;CL:0000148!1.41e-07!10;CL:0000541!1.41e-07!10;CL:0000784!4.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.83e-24;39!CL:0000234;3.83e-24;39!CL:0002619;1.01e-21;3!CL:0000576;4.34e-19;48!CL:0000235;1.69e-18;6!CL:0000860;4.82e-17;33!CL:0002057;4.82e-17;33!CL:0000766;5.32e-13;69!CL:0002567;3.65e-10;3!CL:0000763;9.87e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.13e-32,59;CL:0000576,2.13e-32,59;CL:0000040,2.13e-32,59;CL:0000559,2.13e-32,59;CL:0002009,3.07e-31,61;CL:0000839,1.21e-28,66;CL:0000557,3.61e-28,67;CL:0000473,5.94e-28,48;CL:0000234,5.94e-28,48;CL:0000766,5.37e-26,72;CL:0002619,9.13e-22,3;CL:0000235,1.48e-18,6;CL:0002087,5.17e-17,115;CL:0000860,8.26e-17,42;CL:0002057,8.26e-17,42;CL:0000763,3.13e-16,108;CL:0000049,3.13e-16,108;CL:0002031,3.73e-16,120;CL:0000738,1.60e-15,136;CL:0000037,7.77e-12,168;CL:0002032,4.11e-11,161;CL:0000837,4.11e-11,161;CL:0000988,4.88e-11,177;CL:0002567,3.65e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.73e-14;42!CL:0000049;7.52e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.04e-08;1!DOID:10165;2.04e-08;1!DOID:1798;2.04e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.19e-08,1;DOID:10165,2.19e-08,1;DOID:1798,2.19e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.75e-32!80;UBERON:0002405!6.06e-32!115;UBERON:0001474!3.20e-29!86;UBERON:0002390!2.09e-27!102;UBERON:0003061!2.09e-27!102;UBERON:0002193!1.45e-26!112;UBERON:0004765!3.63e-23!101;UBERON:0001434!3.63e-23!101;UBERON:0002204!1.90e-10!167;UBERON:0003081!1.65e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-24,76;UBERON:0002405,2.21e-24,93;UBERON:0002390,5.93e-23,98;UBERON:0003061,5.93e-23,98;UBERON:0001474,1.96e-22,82;UBERON:0002193,1.74e-20,108;UBERON:0004765,3.78e-20,90;UBERON:0001434,8.44e-18,100;UBERON:0002106,9.81e-10,3;UBERON:0004854,9.81e-10,3;UBERON:0009034,9.81e-10,3;UBERON:0002095,9.81e-10,3;UBERON:0004782,9.81e-10,3;UBERON:0003281,9.81e-10,3;UBERON:0009664,9.81e-10,3;UBERON:0002296,9.81e-10,3;UBERON:0005602,9.81e-10,3;UBERON:0001179,9.81e-10,3;UBERON:0006293,9.81e-10,3;UBERON:0002204,2.79e-09,167;UBERON:0003081,4.12e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0,0,7.16529517567758,3.56283032620878,6.95454032612304,1.01778767145695,1.88937971844405,1.94067248950253,0.929716147622738,1.6446715520873,0.619412741790207,0.28769239232215,1.2808035326455,0.709446689665756,0.344745680736619,0.645484683583826,0,1.12945403725563,2.72906150057846,1.57306439111559,0.918251677112708,1.60464513538047,0,0.989553900560148,0.997318288108159,0,0.290209238628584,0,0,0.75374599577023,1.0429658368404,0.434377689410233,0.605399502633369,0,0.316462387440884,0,0,0,0.336985893439485,0.300353785683013,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.238490624305342,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40164215827233,1.63802985597466,3.71577905721821,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,4.58386110669933,2.34434894420094,0,0.925447434329912,2.40274446275134,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01354254859276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3056390438806,16.9641947934469,0.869178975376065,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.787831823072237,0.741742725430498,1.01105315781277,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0,3.0448149595224,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.372578417648301,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,6.28576066755414,0,0,0.270150338473579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.470958557103084,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.392616934229891,0,0,0,1.87967835959707,1.4180735354187,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0.917899467677836,0.26721740526556,0.551369397209069,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p6@SLC23A2 | |||
}} | }} |
Latest revision as of 22:55, 16 September 2015
Short description: | p6@SLC23A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC23A2_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 0bp_to_ENST00000379333, NM_203327, uc002wlh.1, uc002wli.2_5end |
EntrezGene: | SLC23A2 |
HGNC: | 10973 |
UniProt: | Q9UGH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.13e-32 | 59 |
monocyte | 2.13e-32 | 59 |
monoblast | 2.13e-32 | 59 |
promonocyte | 2.13e-32 | 59 |
macrophage dendritic cell progenitor | 3.07e-31 | 61 |
myeloid lineage restricted progenitor cell | 1.21e-28 | 66 |
granulocyte monocyte progenitor cell | 3.61e-28 | 67 |
defensive cell | 5.94e-28 | 48 |
phagocyte | 5.94e-28 | 48 |
myeloid leukocyte | 5.37e-26 | 72 |
adult endothelial progenitor cell | 9.13e-22 | 3 |
macrophage | 1.48e-18 | 6 |
nongranular leukocyte | 5.17e-17 | 115 |
classical monocyte | 8.26e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.26e-17 | 42 |
myeloid cell | 3.13e-16 | 108 |
common myeloid progenitor | 3.13e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 3.73e-16 | 120 |
leukocyte | 1.60e-15 | 136 |
hematopoietic stem cell | 7.77e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.11e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.11e-11 | 161 |
hematopoietic cell | 4.88e-11 | 177 |
light melanocyte | 3.65e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-24 | 76 |
immune system | 2.21e-24 | 93 |
hematopoietic system | 5.93e-23 | 98 |
blood island | 5.93e-23 | 98 |
bone element | 1.96e-22 | 82 |
hemolymphoid system | 1.74e-20 | 108 |
skeletal element | 3.78e-20 | 90 |
skeletal system | 8.44e-18 | 100 |
spleen | 9.81e-10 | 3 |
gastrointestinal system mesentery | 9.81e-10 | 3 |
stomach region | 9.81e-10 | 3 |
mesentery | 9.81e-10 | 3 |
gastrointestinal system serosa | 9.81e-10 | 3 |
mesentery of stomach | 9.81e-10 | 3 |
gut mesentery | 9.81e-10 | 3 |
dorsal mesentery | 9.81e-10 | 3 |
dorsal mesogastrium | 9.81e-10 | 3 |
peritoneal cavity | 9.81e-10 | 3 |
spleen primordium | 9.81e-10 | 3 |
musculoskeletal system | 2.79e-09 | 167 |
lateral plate mesoderm | 4.12e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.19e-08 | 1 |
endocrine pancreas cancer | 2.19e-08 | 1 |
pancreatic endocrine carcinoma | 2.19e-08 | 1 |