FFCP PHASE1:Hg19::chr17:66245368..66245370,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:66245368..66245370,+
|short_description=p16@AMZ2
|description=CAGE_peak_16_at_AMZ2_5end
|association_with_transcript=27bp_to_uc002jgy.1_5end
|EntrezGene=...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51321 | |EntrezGene=51321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28041 | |HGNC=28041 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_uc002jgy.1_5end | |||
|cluster_id=chr17:66245368..66245370,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_16_at_AMZ2_5end | |||
|id=chr17:66245368..66245370,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.54e-106!42;CL:0000860!1.15e-98!45;CL:0002009!1.11e-77!65;CL:0000557!6.96e-71!71;CL:0002194!3.07e-68!63;CL:0000576!3.07e-68!63;CL:0000040!3.07e-68!63;CL:0000559!3.07e-68!63;CL:0000839!3.96e-61!70;CL:0000766!4.63e-56!76;CL:0000763!9.96e-44!112;CL:0000049!9.96e-44!112;CL:0002031!3.83e-39!124;CL:0002087!1.51e-34!119;CL:0000738!3.06e-34!140;CL:0002032!1.82e-28!165;CL:0000837!1.82e-28!165;CL:0000037!3.80e-27!172;CL:0000566!3.80e-27!172;CL:0000988!1.95e-25!182;CL:0001014!5.83e-16!2;CL:0001016!5.83e-16!2;CL:0000134!7.44e-11!358;CL:0002320!1.46e-10!365;CL:0000219!1.58e-09!390;CL:0000048!2.73e-08!430;CL:0000723!4.11e-08!436;CL:0000034!6.94e-08!444;CL:0000453!6.65e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.51e-72;33!CL:0002057;4.51e-72;33!CL:0000473;5.59e-50;39!CL:0000234;5.59e-50;39!CL:0000576;3.68e-35;48!CL:0000766;1.46e-18;69!CL:0002087;1.49e-10;104!CL:0000763;2.11e-08;100!CL:0001014;7.27e-08;2!CL:0001016;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.33e-60,42;CL:0002057,4.33e-60,42;CL:0000473,1.99e-52,48;CL:0000234,1.99e-52,48;CL:0002009,2.06e-46,61;CL:0000557,3.32e-42,67;CL:0002194,1.08e-41,59;CL:0000576,1.08e-41,59;CL:0000040,1.08e-41,59;CL:0000559,1.08e-41,59;CL:0000839,3.33e-37,66;CL:0000766,4.87e-34,72;CL:0000763,7.99e-26,108;CL:0000049,7.99e-26,108;CL:0002031,4.02e-23,120;CL:0002087,6.57e-21,115;CL:0000738,2.98e-20,136;CL:0002032,6.76e-17,161;CL:0000837,6.76e-17,161;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0001014,6.58e-08,2;CL:0001016,6.58e-08,2;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;9.79e-42;42!CL:0000049;4.67e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.42e-62!80;UBERON:0001474!5.50e-58!86;UBERON:0004765!7.10e-49!101;UBERON:0001434!7.10e-49!101;UBERON:0002390!2.31e-48!102;UBERON:0003061!2.31e-48!102;UBERON:0002193!9.96e-44!112;UBERON:0002405!1.71e-42!115;UBERON:0002204!4.46e-28!167;UBERON:0003081!8.56e-21!216;UBERON:0002384!3.66e-10!375;UBERON:0000926!8.97e-08!448;UBERON:0004120!8.97e-08!448;UBERON:0006603!8.97e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.03e-37,76;UBERON:0001474,2.42e-34,82;UBERON:0004765,3.32e-31,90;UBERON:0002405,3.64e-30,93;UBERON:0002390,1.42e-28,98;UBERON:0003061,1.42e-28,98;UBERON:0001434,5.58e-28,100;UBERON:0002193,7.99e-26,108;UBERON:0002204,3.08e-16,167;UBERON:0003081,4.26e-13,203;UBERON:0000926,7.36e-08,315;UBERON:0004120,7.36e-08,315;UBERON:0006603,7.36e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,2.05583944010913,4.02618282163635,2.3015391385772,0.768482119587302,1.41889337933151,2.41321976515633,1.93645405075148,2.70852973188684,0,1.36453075028923,1.34834090667051,1.22433556948361,2.56743221660875,1.91801137739712,0,0,0.426224750532694,0,0.56738522469114,0,0.502497330513487,1.0429658368404,2.17188844705117,0,0.736555271975129,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,2.05583944010913,4.02618282163635,2.3015391385772,0.768482119587302,1.41889337933151,2.41321976515633,1.93645405075148,2.70852973188684,0,1.36453075028923,1.34834090667051,1.22433556948361,2.56743221660875,1.91801137739712,0,0,0.426224750532694,0,0.56738522469114,0,0.502497330513487,1.0429658368404,2.17188844705117,0,0.736555271975129,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@AMZ2 | |||
}} | }} |
Latest revision as of 23:27, 16 September 2015
Short description: | p16@AMZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_AMZ2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 27bp_to_uc002jgy.1_5end |
EntrezGene: | AMZ2 |
HGNC: | 28041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.33e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.33e-60 | 42 |
defensive cell | 1.99e-52 | 48 |
phagocyte | 1.99e-52 | 48 |
macrophage dendritic cell progenitor | 2.06e-46 | 61 |
granulocyte monocyte progenitor cell | 3.32e-42 | 67 |
monopoietic cell | 1.08e-41 | 59 |
monocyte | 1.08e-41 | 59 |
monoblast | 1.08e-41 | 59 |
promonocyte | 1.08e-41 | 59 |
myeloid lineage restricted progenitor cell | 3.33e-37 | 66 |
myeloid leukocyte | 4.87e-34 | 72 |
myeloid cell | 7.99e-26 | 108 |
common myeloid progenitor | 7.99e-26 | 108 |
hematopoietic lineage restricted progenitor cell | 4.02e-23 | 120 |
nongranular leukocyte | 6.57e-21 | 115 |
leukocyte | 2.98e-20 | 136 |
hematopoietic oligopotent progenitor cell | 6.76e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.76e-17 | 161 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
CD1a-positive Langerhans cell | 6.58e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.58e-08 | 2 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.03e-37 | 76 |
bone element | 2.42e-34 | 82 |
skeletal element | 3.32e-31 | 90 |
immune system | 3.64e-30 | 93 |
hematopoietic system | 1.42e-28 | 98 |
blood island | 1.42e-28 | 98 |
skeletal system | 5.58e-28 | 100 |
hemolymphoid system | 7.99e-26 | 108 |
musculoskeletal system | 3.08e-16 | 167 |
lateral plate mesoderm | 4.26e-13 | 203 |
mesoderm | 7.36e-08 | 315 |
mesoderm-derived structure | 7.36e-08 | 315 |
presumptive mesoderm | 7.36e-08 | 315 |