FFCP PHASE2:Hg19::chr15:25200108..25200143,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8926,entrezgene:6638 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGN...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8926,6638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11171,11164 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P63162,Q9Y675 | ||
|association_with_transcript=0bp_to_ENST00000338094,NM_003097,NM_005678_5end | |association_with_transcript=0bp_to_ENST00000338094,NM_003097,NM_005678_5end | ||
|cluster_id=chr15:25200108..25200143,+ | |cluster_id=chr15:25200108..25200143,+ | ||
Latest revision as of 00:14, 17 September 2015
| Short description: | p1@SNRPN, p1@SNURF |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SNRPN_5end, CAGE_peak_1_at_SNURF_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000338094, NM_003097, NM_005678_5end |
| EntrezGene: | 8926,6638 |
| HGNC: | 11164&submit=Submit 11171, 11164 |
| UniProt: | P63162Q9Y675 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SNRPNp1@SNURF |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.15e-30 | 56 |
| neural rod | 2.15e-30 | 56 |
| future spinal cord | 2.15e-30 | 56 |
| neural keel | 2.15e-30 | 56 |
| neurectoderm | 1.02e-29 | 86 |
| neural plate | 3.55e-29 | 82 |
| presumptive neural plate | 3.55e-29 | 82 |
| adult organism | 3.70e-29 | 114 |
| regional part of nervous system | 7.14e-29 | 53 |
| regional part of brain | 7.14e-29 | 53 |
Showing 1 to 10 of 44 entries
