FFCP PHASE1:Hg19::chr9:26947220..26947270,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:26947220..26947270,- to FFCP PHASE1:Hg19::chr9:26947220..26947270,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9373 | |EntrezGene=9373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9043 | |HGNC=9043 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIM3 | |UniProt=E5RIM3 | ||
|association_with_transcript=0bp_to_ENST00000520884_5end | |||
|cluster_id=chr9:26947220..26947270,- | |||
|description=CAGE_peak_2_at_PLAA_5end | |||
|id=chr9:26947220..26947270,- | |||
|ontology_enrichment_celltype=CL:0000034!1.67e-13!444;CL:0000048!4.77e-13!430;CL:0000723!1.53e-12!436;CL:0000766!1.18e-10!76;CL:0000839!2.00e-09!70;CL:0000557!2.07e-09!71;CL:0002009!2.61e-09!65;CL:0002194!5.48e-09!63;CL:0000576!5.48e-09!63;CL:0000040!5.48e-09!63;CL:0000559!5.48e-09!63;CL:0000738!5.91e-09!140;CL:0002031!2.20e-08!124;CL:0002087!7.04e-08!119;CL:0000037!1.20e-07!172;CL:0000566!1.20e-07!172;CL:0000134!1.88e-07!358;CL:0002057!2.59e-07!42;CL:0000763!6.06e-07!112;CL:0000049!6.06e-07!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.84e-14,441;CL:0000048,8.27e-14,427;CL:0000723,2.77e-13,433;CL:0000766,1.00e-11,72;CL:0000839,1.85e-10,66;CL:0000557,1.98e-10,67;CL:0002009,2.16e-10,61;CL:0002194,4.59e-10,59;CL:0000576,4.59e-10,59;CL:0000040,4.59e-10,59;CL:0000559,4.59e-10,59;CL:0000738,1.49e-09,136;CL:0002031,5.29e-09,120;CL:0002087,1.74e-08,115;CL:0000037,4.11e-08,168;CL:0000134,5.45e-08,354;CL:0000473,6.35e-08,48;CL:0000234,6.35e-08,48;CL:0000763,1.62e-07,108;CL:0000049,1.62e-07,108;CL:0000860,2.59e-07,42;CL:0002057,2.59e-07,42;CL:0002032,3.77e-07,161;CL:0000837,3.77e-07,161;CL:0002320,4.30e-07,361;CL:0000988,6.04e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.95e-11!167;UBERON:0001474!3.42e-08!86;UBERON:0002371!1.03e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.91e-11,167;UBERON:0000926,1.07e-09,315;UBERON:0004120,1.07e-09,315;UBERON:0006603,1.07e-09,315;UBERON:0001474,5.56e-09,82;UBERON:0002371,1.66e-08,76;UBERON:0003081,1.72e-07,203;UBERON:0002384,7.93e-07,371 | |||
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| ||
|short_description=p2@PLAA | |||
}} | }} |
Latest revision as of 00:43, 17 September 2015
Short description: | p2@PLAA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLAA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000520884_5end |
EntrezGene: | PLAA |
HGNC: | 9043 |
UniProt: | E5RIM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.84e-14 | 441 |
multi fate stem cell | 8.27e-14 | 427 |
somatic stem cell | 2.77e-13 | 433 |
myeloid leukocyte | 1.00e-11 | 72 |
myeloid lineage restricted progenitor cell | 1.85e-10 | 66 |
granulocyte monocyte progenitor cell | 1.98e-10 | 67 |
macrophage dendritic cell progenitor | 2.16e-10 | 61 |
monopoietic cell | 4.59e-10 | 59 |
monocyte | 4.59e-10 | 59 |
monoblast | 4.59e-10 | 59 |
promonocyte | 4.59e-10 | 59 |
leukocyte | 1.49e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 5.29e-09 | 120 |
nongranular leukocyte | 1.74e-08 | 115 |
hematopoietic stem cell | 4.11e-08 | 168 |
mesenchymal cell | 5.45e-08 | 354 |
defensive cell | 6.35e-08 | 48 |
phagocyte | 6.35e-08 | 48 |
myeloid cell | 1.62e-07 | 108 |
common myeloid progenitor | 1.62e-07 | 108 |
classical monocyte | 2.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.59e-07 | 42 |
hematopoietic oligopotent progenitor cell | 3.77e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-07 | 161 |
connective tissue cell | 4.30e-07 | 361 |
hematopoietic cell | 6.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.91e-11 | 167 |
mesoderm | 1.07e-09 | 315 |
mesoderm-derived structure | 1.07e-09 | 315 |
presumptive mesoderm | 1.07e-09 | 315 |
bone element | 5.56e-09 | 82 |
bone marrow | 1.66e-08 | 76 |
lateral plate mesoderm | 1.72e-07 | 203 |
connective tissue | 7.93e-07 | 371 |