FFCP PHASE1:Hg19::chr2:134326288..134326301,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29847 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-254bp_to_ENST00000409213_5end | |||
|cluster_id=chr2:134326288..134326301,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_10_at_NCKAP5_5end | |||
|id=chr2:134326288..134326301,- | |||
|ontology_enrichment_celltype=CL:0000243!3.31e-09!15;CL:0000125!3.31e-09!15;CL:0000030!3.31e-09!15;CL:0000339!3.31e-09!15;CL:0000095!3.55e-08!17;CL:0000123!3.55e-08!17;CL:0000650!2.18e-07!3;CL:1000618!2.18e-07!3;CL:1001318!2.18e-07!3;CL:0002173!2.18e-07!3;CL:1000500!2.18e-07!3;CL:0002573!4.08e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3093!1.81e-13!11 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.00e-13;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.00e-13,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001905!4.89e-11!2;UBERON:0002757!4.89e-11!2;UBERON:0010134!4.89e-11!2;UBERON:0002784!4.89e-11!2;UBERON:0005408!4.89e-11!2;UBERON:0001899!4.89e-11!2;UBERON:0003567!2.18e-07!3;UBERON:0003838!2.18e-07!3;UBERON:0005169!2.18e-07!3;UBERON:0002321!2.18e-07!3;UBERON:0005215!2.18e-07!3;UBERON:0002303!2.18e-07!3;UBERON:0002319!2.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.10e-26;2!UBERON:0002757;8.10e-26;2!UBERON:0010134;8.10e-26;2!UBERON:0005408;8.10e-26;2!UBERON:0001899;8.10e-26;2!UBERON:0003296;1.21e-13;4!UBERON:0010133;1.21e-13;4!UBERON:0002784;1.21e-13;4!UBERON:0001894;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1340195901437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0.49701014226173,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.495743057036009,0,0.318004350653419,1.10406443001755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,2.2644426535001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@NCKAP5 | |||
}} |
Latest revision as of 00:54, 17 September 2015
Short description: | p10@NCKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NCKAP5_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -254bp_to_ENST00000409213_5end |
EntrezGene: | NCKAP5 |
HGNC: | 29847 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.00e-13 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |