FFCP PHASE2:Hg19::chr17:67138020..67138062,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23460 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:36 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=36 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8N139 | ||
|association_with_transcript=-5bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end | |association_with_transcript=-5bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end | ||
|cluster_id=chr17:67138020..67138062,- | |cluster_id=chr17:67138020..67138062,- |
Latest revision as of 01:03, 17 September 2015
Short description: | p1@ABCA6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCA6_5end |
Coexpression cluster: | C2432_Cardiac_Hepatocyte_Fibroblast_lung_heart_adipose_liver |
Association with transcript: | -5bp_to_ENST00000284425, NM_080284, uc002jhw.1, uc002jhy.2_5end |
EntrezGene: | ABCA6 |
HGNC: | 36 |
UniProt: | Q8N139 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ABCA6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 2.06e-09 | 76 |
muscle precursor cell | 8.65e-08 | 58 |
myoblast | 8.65e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.65e-08 | 58 |
muscle cell | 9.18e-08 | 55 |
cardiocyte | 1.50e-07 | 16 |
fat cell | 8.39e-07 | 15 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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adult organism | 1.71e-32 | 114 |
anatomical conduit | 1.54e-24 | 240 |
tube | 1.84e-21 | 192 |
epithelium | 1.03e-18 | 306 |
cell layer | 4.62e-18 | 309 |
splanchnic layer of lateral plate mesoderm | 2.02e-17 | 83 |
structure with developmental contribution from neural crest | 2.50e-15 | 132 |
circulatory system | 1.29e-14 | 112 |
epithelial tube | 1.63e-14 | 117 |
primary circulatory organ | 1.71e-14 | 27 |
Showing 1 to 10 of 79 entries