FFCP PHASE1:Hg19::chr4:185734844..185734848,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=D6RF06 | |||
|association_with_transcript=71bp_to_ENST00000508020_5end | |||
|cluster_id=chr4:185734844..185734848,+ | |||
|coexpression_cluster_id=C4229 | |||
|description=CAGE_peak_1_at_ENST00000508020_5end | |||
|id=chr4:185734844..185734848,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.89e-32!42;CL:0000860!3.38e-29!45;CL:0000766!8.33e-26!76;CL:0002194!1.08e-18!63;CL:0000576!1.08e-18!63;CL:0000040!1.08e-18!63;CL:0000559!1.08e-18!63;CL:0000839!9.05e-18!70;CL:0002009!9.86e-18!65;CL:0000557!2.45e-17!71;CL:0000738!9.96e-13!140;CL:0000763!1.55e-12!112;CL:0000049!1.55e-12!112;CL:0000094!1.38e-10!8;CL:0002087!1.38e-09!119;CL:0000037!5.27e-08!172;CL:0000566!5.27e-08!172;CL:0002031!5.40e-08!124;CL:0000081!4.13e-07!11;CL:0002032!6.94e-07!165;CL:0000837!6.94e-07!165;CL:0000988!8.54e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.10e-30;33!CL:0002057;3.10e-30;33!CL:0000473;1.55e-20;39!CL:0000234;1.55e-20;39!CL:0000576;3.98e-17;48!CL:0000766;6.26e-15;69!CL:0000094;4.46e-12;8!CL:0000775;4.11e-09;3!CL:0000081;1.57e-08;11!CL:0000763;2.14e-07;100!CL:0000771;8.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.59e-32,42;CL:0002057,7.59e-32,42;CL:0000766,7.30e-28,72;CL:0000473,6.28e-27,48;CL:0000234,6.28e-27,48;CL:0002194,4.46e-20,59;CL:0000576,4.46e-20,59;CL:0000040,4.46e-20,59;CL:0000559,4.46e-20,59;CL:0002009,3.38e-19,61;CL:0000839,7.35e-19,66;CL:0000557,1.79e-18,67;CL:0000763,1.27e-15,108;CL:0000049,1.27e-15,108;CL:0000738,1.73e-13,136;CL:0000094,4.65e-12,8;CL:0002087,1.20e-09,115;CL:0000037,3.18e-09,168;CL:0000775,4.13e-09,3;CL:0000081,1.62e-08,11;CL:0002032,1.78e-08,161;CL:0000837,1.78e-08,161;CL:0000988,2.53e-08,177;CL:0002031,3.85e-08,120;CL:0000771,8.55e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-39!115;UBERON:0002390!2.70e-23!102;UBERON:0003061!2.70e-23!102;UBERON:0002193!1.75e-21!112;UBERON:0002405!1.10e-16!115;UBERON:0002371!6.89e-15!80;UBERON:0001049!5.07e-14!57;UBERON:0005068!5.07e-14!57;UBERON:0006241!5.07e-14!57;UBERON:0007135!5.07e-14!57;UBERON:0001474!5.71e-13!86;UBERON:0002616!6.49e-11!59;UBERON:0003075!1.28e-10!86;UBERON:0007284!1.28e-10!86;UBERON:0001017!5.58e-10!82;UBERON:0005743!1.09e-09!86;UBERON:0002346!1.16e-09!90;UBERON:0003080!2.56e-09!42;UBERON:0004765!2.78e-09!101;UBERON:0001434!2.78e-09!101;UBERON:0002298!4.31e-09!8;UBERON:0000178!5.30e-09!15;UBERON:0000179!5.30e-09!15;UBERON:0000463!5.30e-09!15;UBERON:0002780!1.04e-08!41;UBERON:0001890!1.04e-08!41;UBERON:0006240!1.04e-08!41;UBERON:0000955!1.31e-08!69;UBERON:0006238!1.31e-08!69;UBERON:0000073!8.05e-08!94;UBERON:0001016!8.05e-08!94;UBERON:0003081!6.67e-07!216;UBERON:0000479!7.57e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.48e-12;15!UBERON:0000179;6.48e-12;15!UBERON:0000463;6.48e-12;15!UBERON:0002390;4.57e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.63e-26,98;UBERON:0003061,1.63e-26,98;UBERON:0002193,1.28e-24,108;UBERON:0007023,3.65e-16,114;UBERON:0002405,5.73e-16,93;UBERON:0002371,1.85e-15,76;UBERON:0001474,7.98e-14,82;UBERON:0004765,5.41e-12,90;UBERON:0000178,5.71e-12,15;UBERON:0000179,5.71e-12,15;UBERON:0000463,5.71e-12,15;UBERON:0001434,3.93e-10,100;UBERON:0003081,9.84e-10,203 | |||
|phase1_expression=0,0.856402095563933,0.422863212287913,0,0,0,0,1.89515962028049,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,0.383829398097213,0.309632246632152,0,0,0,0,0,0.587200878669695,6.64794490238253,5.61524452916397,2.17010870715852,0,0,0,0.726991193897824,0,1.21292030593908,1.39457422143411,0.822335776043652,0.929119112685311,2.58923153089935,1.7931249457037,3.07426898855161,6.20542225325913,4.51839278508678,5.41705946377367,1.69418105588344,0,0.449446968890169,6.12167784741805,3.20929027076094,1.27867425159808,0.329851300186716,0.199463657621632,2.13112375266347,0.580418477257168,2.26954089876456,0.622822248995575,3.51748131359441,1.5644487552606,3.9093992046921,2.42159801053347,1.47311054395026,1.58231193720442,0.211255286311942,0,0.628975936525128,4.04383072127382,1.50176892841506,3.2145117339416,0.285012743741249,0,0,0,0,0,1.70692089026603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.5807127077371,85.3116581126316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,3.9313088667105,24.813176080619,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,2.88239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0.167516265334349,0,11.2351053592077,14.9580729602012,19.0631136180576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,7.33428282783297,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73988653579522,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,3.55213326462519,0.764637207142375,2.27858874869665,2.62054953003568,4.52498500394814,12.3209929126616,5.94034580961926,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0.844016498463076,0.111308705022906,0.329607748453519,0,1.39473591775749,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,1.11321717794222,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0.30607276163049,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.126621591911757,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0,0,0,0,1.11712960508902,0.458320848023367,0,0.399358000997982,0.858452096273142,2.23171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0.0984274815147488,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90517903781507,1.32506888912221,3.36135686540031,0.26446520348538,0,0,3.09683496446315,0.471612915298998,1.24271716604159,2.97699613087171,0,0,0,7.07223144380316,14.2893239592939,30.6345576763462,29.1806641331726,0,0,0.366078794705889,0.250381861413,4.0138643698305,0.998361463831671,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,1.56215619722769,0.206686796501184,0.19024743058172,0,0.548257766857182,0,0,0,1.07140367175657,0,8.49751845931284,18.2129753081038,0.354809480650555,0,0,0.611727596791485,0,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,1.29068207646083,0,0,0,0,0,0,0,0,0,41.4354455800253,7.28905928679354,0,0,0,0,0,0,0,1.35866559210006,0.0771741581079447,0,0.470317296361523,0,0.235676547101626,5.69294554633341,2.0793248022896,0.4226557275834,0,1.69171052363736,1.61144719933943,0,0,0,0,0,0,1.86341458096887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,2.48750831837634,0.620597975171371,0,0,0.129177819672012,1.24149428591716,0,0.190941474834495,0,0,0,0.0673520530145875,0.573777643141411,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p1@ENST00000508020 | |||
}} |
Latest revision as of 01:59, 17 September 2015
Short description: | p1@ENST00000508020 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000508020_5end |
Coexpression cluster: | C4229_Eosinophils_mature_skeletal_Neutrophils_Hepatocyte_pituitary_Whole |
Association with transcript: | 71bp_to_ENST00000508020_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.59e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.59e-32 | 42 |
myeloid leukocyte | 7.30e-28 | 72 |
defensive cell | 6.28e-27 | 48 |
phagocyte | 6.28e-27 | 48 |
monopoietic cell | 4.46e-20 | 59 |
monocyte | 4.46e-20 | 59 |
monoblast | 4.46e-20 | 59 |
promonocyte | 4.46e-20 | 59 |
macrophage dendritic cell progenitor | 3.38e-19 | 61 |
myeloid lineage restricted progenitor cell | 7.35e-19 | 66 |
granulocyte monocyte progenitor cell | 1.79e-18 | 67 |
myeloid cell | 1.27e-15 | 108 |
common myeloid progenitor | 1.27e-15 | 108 |
leukocyte | 1.73e-13 | 136 |
granulocyte | 4.65e-12 | 8 |
nongranular leukocyte | 1.20e-09 | 115 |
hematopoietic stem cell | 3.18e-09 | 168 |
neutrophil | 4.13e-09 | 3 |
blood cell | 1.62e-08 | 11 |
hematopoietic oligopotent progenitor cell | 1.78e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-08 | 161 |
hematopoietic cell | 2.53e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 3.85e-08 | 120 |
eosinophil | 8.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.63e-26 | 98 |
blood island | 1.63e-26 | 98 |
hemolymphoid system | 1.28e-24 | 108 |
adult organism | 3.65e-16 | 114 |
immune system | 5.73e-16 | 93 |
bone marrow | 1.85e-15 | 76 |
bone element | 7.98e-14 | 82 |
skeletal element | 5.41e-12 | 90 |
blood | 5.71e-12 | 15 |
haemolymphatic fluid | 5.71e-12 | 15 |
organism substance | 5.71e-12 | 15 |
skeletal system | 3.93e-10 | 100 |
lateral plate mesoderm | 9.84e-10 | 203 |