FFCP PHASE1:Hg19::chr11:18656028..18656037,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26818 | |||
|TSSclassifier=strong | |||
|UniProt=Q68D10 | |||
|association_with_transcript=2bp_to_ENST00000336349_5end | |||
|cluster_id=chr11:18656028..18656037,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_SPTY2D1_5end | |||
|id=chr11:18656028..18656037,- | |||
|ontology_enrichment_celltype=CL:0000766!5.25e-34!76;CL:0000839!1.08e-29!70;CL:0000557!1.69e-28!71;CL:0002009!2.53e-28!65;CL:0002057!8.11e-28!42;CL:0002194!1.99e-27!63;CL:0000576!1.99e-27!63;CL:0000040!1.99e-27!63;CL:0000559!1.99e-27!63;CL:0000860!5.28e-26!45;CL:0000763!5.75e-24!112;CL:0000049!5.75e-24!112;CL:0000738!5.42e-17!140;CL:0002031!3.26e-16!124;CL:0002032!1.05e-14!165;CL:0000837!1.05e-14!165;CL:0000037!1.47e-13!172;CL:0000566!1.47e-13!172;CL:0002087!3.44e-13!119;CL:0000988!5.79e-12!182;CL:0000094!5.84e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.35e-61;33!CL:0002057;8.35e-61;33!CL:0000473;8.65e-47;39!CL:0000234;8.65e-47;39!CL:0000576;1.64e-40;48!CL:0000766;5.48e-31;69!CL:0000763;5.44e-18;100!CL:0000094;2.93e-13;8!CL:0002087;2.33e-09;104!CL:0000081;2.79e-09;11!CL:0000775;6.77e-08;3!CL:0000738;7.11e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.90e-71,72;CL:0000860,1.40e-63,42;CL:0002057,1.40e-63,42;CL:0000839,3.38e-62,66;CL:0000473,2.65e-60,48;CL:0000234,2.65e-60,48;CL:0002194,1.69e-56,59;CL:0000576,1.69e-56,59;CL:0000040,1.69e-56,59;CL:0000559,1.69e-56,59;CL:0000557,1.01e-55,67;CL:0002009,3.09e-54,61;CL:0000763,4.26e-48,108;CL:0000049,4.26e-48,108;CL:0000738,5.39e-32,136;CL:0002031,2.42e-29,120;CL:0002032,3.19e-28,161;CL:0000837,3.19e-28,161;CL:0000037,2.22e-26,168;CL:0000988,3.12e-24,177;CL:0002087,3.82e-24,115;CL:0000094,1.13e-13,8;CL:0000081,1.43e-09,11;CL:0000775,5.67e-08,3;CL:0000134,1.13e-07,354;CL:0002320,3.03e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-45;42!CL:0000049;6.34e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.13e-26!102;UBERON:0003061!2.13e-26!102;UBERON:0002193!6.03e-26!112;UBERON:0002371!1.61e-23!80;UBERON:0001474!9.31e-20!86;UBERON:0007023!8.50e-19!115;UBERON:0002405!2.30e-17!115;UBERON:0004765!9.50e-15!101;UBERON:0001434!9.50e-15!101;UBERON:0003081!7.55e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.55e-07;15!UBERON:0000179;2.55e-07;15!UBERON:0000463;2.55e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-51,98;UBERON:0003061,1.28e-51,98;UBERON:0002371,1.56e-47,76;UBERON:0002193,3.78e-47,108;UBERON:0001474,4.53e-43,82;UBERON:0002405,6.93e-40,93;UBERON:0004765,4.81e-38,90;UBERON:0001434,6.75e-33,100;UBERON:0003081,1.24e-23,203;UBERON:0002204,2.99e-18,167;UBERON:0000926,5.35e-14,315;UBERON:0004120,5.35e-14,315;UBERON:0006603,5.35e-14,315;UBERON:0000178,1.17e-07,15;UBERON:0000179,1.17e-07,15;UBERON:0000463,1.17e-07,15;UBERON:0007023,1.79e-07,114 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.0787107813136792,1.57345710739562,1.91914699048606,0.464448369948228,0,0,0.369754010166788,0,0,0,0,1.40381113229099,0.434021741431704,2.23915474239924,1.29557466407592,1.28787783817093,1.45398238779565,2.64513160582167,3.88134497900506,3.25400651667958,3.70051099219643,7.12324653058738,3.16461631554365,4.61089271752381,4.7296445977717,3.7922024881028,1.29096936716765,4.06279459783025,1.88242339542605,3.0019676506363,4.71919317334678,5.50951006267625,5.45579346029359,2.55734850319616,2.30895910130701,3.78980949481101,2.55734850319616,7.2552309657146,9.64554881974938,4.35975574296902,3.01498398308092,2.60741459210101,3.25783267057675,7.87019353423379,8.47038562771399,7.27863491114034,0.845021145247767,0.637812899895131,1.04829322754188,1.12328631146495,2.10247649978109,1.6072558669708,0.570025487482497,1.19350006319454,2.00930569141097,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0.589211814949674,0.221533894583621,0,0.512365278902701,0,0.493313713811028,0,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0.950452044448374,0.752875595388864,0.511946444617674,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.458426764241994,0.364295288292542,0,1.62273696827342,0.348259474598534,0.398873881556595,0.238490624305342,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,22.4026709641308,15.511210565933,0,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.710019185033229,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.723033089650446,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,2.53510069643662,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.380508304469197,0,0.858486162094873,1.47730203652438,0.702012795417713,0.594524649154913,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,1.03664057770386,1.72943944100354,1.38866676769018,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,8.98808428736619,2.99161459204025,10.3603878359009,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0.215714200818617,0,1.21251028578504,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,1.28913384510255,0,0.182091168006717,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,2.41185864310528,1.0457418040996,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0.330569830721956,0.576570202095319,0,0.708104465988849,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.941438007767792,0,0,0,0.229723400206959,2.53723804616085,2.29391162142713,1.70894156152249,1.66762242820452,1.23408681925858,1.94541993357815,2.16012574895246,1.58625035258854,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0.687010689511529,0,0,0.166849141711909,0.586164286206121,0.278406173895242,0,1.08182271390393,0,0,0.18714054040822,0.73254089635947,0.121360521749513,0,0,0.71623345421307,0.296964680832639,4.30024982938925,0.994147647766298,1.1253553312841,0.222617410045812,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0.358042349351218,0.511572370226872,1.08507746200627,0,0,0,0.371072392647405,0,0.520855522170466,1.13697999995054,0.724999575434793,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.331737779793674,0,0.438770794307945,0.10893846351899,0,1.15425387755696,0.113942055847001,0,0,0,1.5950057986596,0,1.06606955203727,0,0,0.498635045700469,0,0.392125068635479,0,0,0.158936578980379,0,0.163232808159148,0,0,0,1.06149077404007,1.22206028986725,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| |||
|short_description=p7@SPTY2D1 | |||
}} |
Latest revision as of 03:31, 17 September 2015
Short description: | p7@SPTY2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPTY2D1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 2bp_to_ENST00000336349_5end |
EntrezGene: | SPTY2D1 |
HGNC: | 26818 |
UniProt: | Q68D10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.90e-71 | 72 |
classical monocyte | 1.40e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-63 | 42 |
myeloid lineage restricted progenitor cell | 3.38e-62 | 66 |
defensive cell | 2.65e-60 | 48 |
phagocyte | 2.65e-60 | 48 |
monopoietic cell | 1.69e-56 | 59 |
monocyte | 1.69e-56 | 59 |
monoblast | 1.69e-56 | 59 |
promonocyte | 1.69e-56 | 59 |
granulocyte monocyte progenitor cell | 1.01e-55 | 67 |
macrophage dendritic cell progenitor | 3.09e-54 | 61 |
myeloid cell | 4.26e-48 | 108 |
common myeloid progenitor | 4.26e-48 | 108 |
leukocyte | 5.39e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 2.42e-29 | 120 |
hematopoietic oligopotent progenitor cell | 3.19e-28 | 161 |
hematopoietic multipotent progenitor cell | 3.19e-28 | 161 |
hematopoietic stem cell | 2.22e-26 | 168 |
hematopoietic cell | 3.12e-24 | 177 |
nongranular leukocyte | 3.82e-24 | 115 |
granulocyte | 1.13e-13 | 8 |
blood cell | 1.43e-09 | 11 |
neutrophil | 5.67e-08 | 3 |
mesenchymal cell | 1.13e-07 | 354 |
connective tissue cell | 3.03e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-51 | 98 |
blood island | 1.28e-51 | 98 |
bone marrow | 1.56e-47 | 76 |
hemolymphoid system | 3.78e-47 | 108 |
bone element | 4.53e-43 | 82 |
immune system | 6.93e-40 | 93 |
skeletal element | 4.81e-38 | 90 |
skeletal system | 6.75e-33 | 100 |
lateral plate mesoderm | 1.24e-23 | 203 |
musculoskeletal system | 2.99e-18 | 167 |
mesoderm | 5.35e-14 | 315 |
mesoderm-derived structure | 5.35e-14 | 315 |
presumptive mesoderm | 5.35e-14 | 315 |
blood | 1.17e-07 | 15 |
haemolymphatic fluid | 1.17e-07 | 15 |
organism substance | 1.17e-07 | 15 |
adult organism | 1.79e-07 | 114 |