FFCP PHASE1:Hg19::chr11:1897697..1897721,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:1897697..1897721,+ to FFCP PHASE1:Hg19::chr11:1897697..1897721,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4046 | |EntrezGene=4046 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6707 | |HGNC=6707 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBD8 | |UniProt=E9PBD8 | ||
|association_with_transcript=0bp_to_ENST00000432093_5end | |||
|cluster_id=chr11:1897697..1897721,+ | |||
|description=CAGE_peak_7_at_LSP1_5end | |||
|id=chr11:1897697..1897721,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.46e-12!9;CL:0000055!4.35e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.02e-24;9!CL:0000680;6.14e-14;7!CL:0000594;9.58e-10;3!CL:0002564;4.98e-09;3!CL:0002575;2.10e-07;2!CL:0002602;3.29e-07;2!CL:0002367;3.65e-07;2!CL:0002588;5.33e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,7.03e-25,9;CL:0000594,1.03e-09,3;CL:0002564,4.23e-09,3;CL:0000680,1.21e-08,58;CL:0000056,1.21e-08,58;CL:0000355,1.21e-08,58;CL:0002575,2.11e-07,2;CL:0002602,3.20e-07,2;CL:0002367,3.50e-07,2;CL:0002588,4.82e-07,2;CL:0000187,5.57e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!2.22e-11!11;UBERON:0006876!2.22e-11!11;UBERON:0000481!3.71e-09!347;UBERON:0002385!7.49e-09!63;UBERON:0001015!7.49e-09!63;UBERON:0000383!7.49e-09!63;UBERON:0001134!6.39e-08!61;UBERON:0002036!6.39e-08!61;UBERON:0003082!6.39e-08!61;UBERON:0000914!6.79e-08!83;UBERON:0002329!6.79e-08!83;UBERON:0003077!6.79e-08!83;UBERON:0003059!6.79e-08!83;UBERON:0007282!6.79e-08!83;UBERON:0009618!6.79e-08!83;UBERON:0007285!6.79e-08!83;UBERON:0004290!9.36e-08!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.16e-23;16!UBERON:0002036;4.16e-23;16!UBERON:0011135;1.51e-14;5!UBERON:0002216;1.51e-14;5!UBERON:0011134;1.51e-14;5!UBERON:0002209;1.51e-14;5!UBERON:0002213;1.51e-14;5!UBERON:0007844;1.51e-14;5!UBERON:0011138;1.51e-14;5!UBERON:0001130;1.51e-14;5!UBERON:0001066;1.51e-14;5!UBERON:0001468;1.51e-14;5!UBERON:0002385;3.08e-10;31!UBERON:0001015;3.08e-10;31!UBERON:0000383;3.08e-10;31!UBERON:0002242;4.98e-09;3!UBERON:0004905;6.23e-09;8!UBERON:0000982;6.23e-09;8!UBERON:0004770;6.23e-09;8!UBERON:0006444;3.29e-07;2!UBERON:0001995;3.29e-07;2!UBERON:0004715;3.29e-07;2!UBERON:0005969;3.65e-07;2!UBERON:0003956;3.65e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.25e-14,5;UBERON:0002216,1.25e-14,5;UBERON:0011134,1.25e-14,5;UBERON:0002209,1.25e-14,5;UBERON:0002213,1.25e-14,5;UBERON:0005856,1.25e-14,5;UBERON:0005866,1.25e-14,5;UBERON:0005863,1.25e-14,5;UBERON:0007844,1.25e-14,5;UBERON:0011138,1.25e-14,5;UBERON:0001130,1.25e-14,5;UBERON:0001066,1.25e-14,5;UBERON:0001468,1.25e-14,5;UBERON:0003104,1.43e-10,160;UBERON:0009142,1.43e-10,160;UBERON:0002242,4.23e-09,3;UBERON:0003068,4.23e-09,3;UBERON:0002328,4.23e-09,3;UBERON:0004880,4.23e-09,3;UBERON:0001134,4.81e-09,62;UBERON:0002036,4.81e-09,62;UBERON:0003082,4.81e-09,62;UBERON:0004905,5.55e-09,8;UBERON:0000982,5.55e-09,8;UBERON:0004770,5.55e-09,8;UBERON:0002385,1.24e-08,64;UBERON:0001015,1.24e-08,64;UBERON:0000383,1.24e-08,64;UBERON:0002329,2.17e-07,71;UBERON:0003059,2.17e-07,71;UBERON:0007282,2.17e-07,71;UBERON:0004290,2.17e-07,71;UBERON:0009618,2.17e-07,71;UBERON:0003077,3.11e-07,72;UBERON:0007285,3.11e-07,72;UBERON:0006444,3.20e-07,2;UBERON:0001995,3.20e-07,2;UBERON:0004715,3.20e-07,2;UBERON:0005969,3.50e-07,2;UBERON:0003956,3.50e-07,2;UBERON:0007524,4.42e-07,73 | |||
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| ||
|short_description=p7@LSP1 | |||
}} | }} |
Latest revision as of 04:13, 17 September 2015
Short description: | p7@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LSP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432093_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | E9PBD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 7.03e-25 | 9 |
skeletal muscle satellite cell | 1.03e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 4.23e-09 | 3 |
muscle precursor cell | 1.21e-08 | 58 |
myoblast | 1.21e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-08 | 58 |
central nervous system pericyte | 2.11e-07 | 2 |
annulus pulposus cell | 3.20e-07 | 2 |
trabecular meshwork cell | 3.50e-07 | 2 |
smooth muscle cell of the umbilical vein | 4.82e-07 | 2 |
muscle cell | 5.57e-07 | 55 |