FFCP PHASE1:Hg19::chr19:3061397..3061419,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166 | |EntrezGene=166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |HGNC=307 | ||
|TSSclassifier=strong | |||
|UniProt=Q08117 | |UniProt=Q08117 | ||
|association_with_transcript=-151bp_to_X73358_5end | |association_with_transcript=-151bp_to_X73358_5end | ||
|cluster_id=chr19:3061397..3061419,- | |||
|description=CAGE_peak_12_at_AES_5end | |description=CAGE_peak_12_at_AES_5end | ||
|id=chr19:3061397..3061419,- | |id=chr19:3061397..3061419,- | ||
|ontology_enrichment_celltype=CL:0000192!1.60e-10!42;CL:0000514!1.60e-10!42;CL:0000055!9.98e-10!180;CL:0000183!1.19e-08!59;CL:0000680!1.80e-08!57;CL:0000056!1.80e-08!57;CL:0000355!1.80e-08!57;CL:0000187!2.15e-08!54;CL:0000359!4.50e-08!32;CL:0000791!1.23e-07!18;CL:0000789!1.23e-07!18;CL:0002420!1.23e-07!18;CL:0002419!1.23e-07!18;CL:0000790!1.23e-07!18;CL:0000393!7.45e-07!60;CL:0000211!7.45e-07!60 | |ontology_enrichment_celltype=CL:0000192!1.60e-10!42;CL:0000514!1.60e-10!42;CL:0000055!9.98e-10!180;CL:0000183!1.19e-08!59;CL:0000680!1.80e-08!57;CL:0000056!1.80e-08!57;CL:0000355!1.80e-08!57;CL:0000187!2.15e-08!54;CL:0000359!4.50e-08!32;CL:0000791!1.23e-07!18;CL:0000789!1.23e-07!18;CL:0002420!1.23e-07!18;CL:0002419!1.23e-07!18;CL:0000790!1.23e-07!18;CL:0000393!7.45e-07!60;CL:0000211!7.45e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.74e-09;32!CL:0000192;2.43e-09;43!CL:0000791;8.72e-09;18!CL:0000789;8.72e-09;18!CL:0002419;8.72e-09;18 | |ontology_enrichment_celltype_v019=CL:0000359;1.74e-09;32!CL:0000192;2.43e-09;43!CL:0000791;8.72e-09;18!CL:0000789;8.72e-09;18!CL:0002419;8.72e-09;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.07e-12,43;CL:0000514,1.07e-12,43;CL:0000187,7.61e-10,55;CL:0000359,1.05e-09,32;CL:0000791,2.17e-09,18;CL:0000789,2.17e-09,18;CL:0002420,2.17e-09,18;CL:0002419,2.17e-09,18;CL:0000790,2.17e-09,18;CL:0000680,8.39e-09,58;CL:0000056,8.39e-09,58;CL:0000355,8.39e-09,58;CL:0000393,6.99e-08,61;CL:0000211,6.99e-08,61;CL:0000625,5.00e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000514;2.43e-09;43!CL:0000790;8.72e-09;18 | |ontology_enrichment_development_v019=CL:0000514;2.43e-09;43!CL:0000790;8.72e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.37e-11!83;UBERON:0002329!1.37e-11!83;UBERON:0003077!1.37e-11!83;UBERON:0003059!1.37e-11!83;UBERON:0007282!1.37e-11!83;UBERON:0009618!1.37e-11!83;UBERON:0007285!1.37e-11!83;UBERON:0000486!1.23e-10!82;UBERON:0004290!5.93e-10!70;UBERON:0001637!7.82e-09!42;UBERON:0003509!7.82e-09!42;UBERON:0004572!7.82e-09!42;UBERON:0002385!1.55e-08!63;UBERON:0001015!1.55e-08!63;UBERON:0000383!1.55e-08!63;UBERON:0001134!3.48e-08!61;UBERON:0002036!3.48e-08!61;UBERON:0003082!3.48e-08!61;UBERON:0004573!5.63e-08!33;UBERON:0004571!5.63e-08!33;UBERON:0005256!5.94e-07!143;UBERON:0002100!8.69e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!1.37e-11!83;UBERON:0002329!1.37e-11!83;UBERON:0003077!1.37e-11!83;UBERON:0003059!1.37e-11!83;UBERON:0007282!1.37e-11!83;UBERON:0009618!1.37e-11!83;UBERON:0007285!1.37e-11!83;UBERON:0000486!1.23e-10!82;UBERON:0004290!5.93e-10!70;UBERON:0001637!7.82e-09!42;UBERON:0003509!7.82e-09!42;UBERON:0004572!7.82e-09!42;UBERON:0002385!1.55e-08!63;UBERON:0001015!1.55e-08!63;UBERON:0000383!1.55e-08!63;UBERON:0001134!3.48e-08!61;UBERON:0002036!3.48e-08!61;UBERON:0003082!3.48e-08!61;UBERON:0004573!5.63e-08!33;UBERON:0004571!5.63e-08!33;UBERON:0005256!5.94e-07!143;UBERON:0002100!8.69e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.04e-08;33!UBERON:0004571;8.04e-08;33 | |ontology_enrichment_uberon_v019=UBERON:0004573;8.04e-08;33!UBERON:0004571;8.04e-08;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.49e-09,73;UBERON:0000486,2.61e-09,83;UBERON:0002329,2.77e-09,71;UBERON:0003059,2.77e-09,71;UBERON:0007282,2.77e-09,71;UBERON:0004290,2.77e-09,71;UBERON:0009618,2.77e-09,71;UBERON:0007503,4.04e-09,78;UBERON:0003077,5.42e-09,72;UBERON:0007285,5.42e-09,72;UBERON:0002385,1.72e-08,64;UBERON:0001015,1.72e-08,64;UBERON:0000383,1.72e-08,64;UBERON:0004573,2.79e-08,33;UBERON:0004571,2.79e-08,33;UBERON:0001134,2.91e-08,62;UBERON:0002036,2.91e-08,62;UBERON:0003082,2.91e-08,62;UBERON:0001637,7.89e-08,42;UBERON:0003509,7.89e-08,42;UBERON:0004572,7.89e-08,42;UBERON:0005256,7.30e-07,122 | |||
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| ||
|short_description=p12@AES | |short_description=p12@AES | ||
}} | }} |
Latest revision as of 04:21, 17 September 2015
Short description: | p12@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AES_5end |
Coexpression cluster: | NA |
Association with transcript: | -151bp_to_X73358_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.07e-12 | 43 |
smooth muscle myoblast | 1.07e-12 | 43 |
muscle cell | 7.61e-10 | 55 |
vascular associated smooth muscle cell | 1.05e-09 | 32 |
mature alpha-beta T cell | 2.17e-09 | 18 |
alpha-beta T cell | 2.17e-09 | 18 |
immature T cell | 2.17e-09 | 18 |
mature T cell | 2.17e-09 | 18 |
immature alpha-beta T cell | 2.17e-09 | 18 |
muscle precursor cell | 8.39e-09 | 58 |
myoblast | 8.39e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.39e-09 | 58 |
electrically responsive cell | 6.99e-08 | 61 |
electrically active cell | 6.99e-08 | 61 |
CD8-positive, alpha-beta T cell | 5.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.49e-09 | 73 |
multilaminar epithelium | 2.61e-09 | 83 |
somite | 2.77e-09 | 71 |
presomitic mesoderm | 2.77e-09 | 71 |
presumptive segmental plate | 2.77e-09 | 71 |
dermomyotome | 2.77e-09 | 71 |
trunk paraxial mesoderm | 2.77e-09 | 71 |
epithelial vesicle | 4.04e-09 | 78 |
paraxial mesoderm | 5.42e-09 | 72 |
presumptive paraxial mesoderm | 5.42e-09 | 72 |
muscle tissue | 1.72e-08 | 64 |
musculature | 1.72e-08 | 64 |
musculature of body | 1.72e-08 | 64 |
systemic artery | 2.79e-08 | 33 |
systemic arterial system | 2.79e-08 | 33 |
skeletal muscle tissue | 2.91e-08 | 62 |
striated muscle tissue | 2.91e-08 | 62 |
myotome | 2.91e-08 | 62 |
artery | 7.89e-08 | 42 |
arterial blood vessel | 7.89e-08 | 42 |
arterial system | 7.89e-08 | 42 |
trunk mesenchyme | 7.30e-07 | 122 |