FFCP PHASE1:Hg19::chr2:142889101..142889104,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53353 | |EntrezGene=53353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6693 | |HGNC=6693 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZR2,Q96NT6 | |UniProt=Q9NZR2,Q96NT6 | ||
|association_with_transcript=165bp_to_ENST00000389484,NM_018557,uc002tvj.1,uc010fnl.1_5end | |association_with_transcript=165bp_to_ENST00000389484,NM_018557,uc002tvj.1,uc010fnl.1_5end | ||
|cluster_id=chr2:142889101..142889104,- | |||
|description=CAGE_peak_13_at_LRP1B_5end | |description=CAGE_peak_13_at_LRP1B_5end | ||
|id=chr2:142889101..142889104,- | |id=chr2:142889101..142889104,- | ||
|ontology_enrichment_celltype=CL:1001319!3.02e-07!1;CL:1000600!3.02e-07!1 | |ontology_enrichment_celltype=CL:1001319!3.02e-07!1;CL:1000600!3.02e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002327;6.30e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.56e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.55e-98;1!UBERON:0006601;7.94e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;6.30e-26;4!DOID:1612;6.30e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.56e-26,4;DOID:1612,5.56e-26,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001896;5.04e-34;3!UBERON:0005290;5.04e-34;3!UBERON:0001911;6.30e-26;4!UBERON:0002298;8.34e-18;6!UBERON:0000310;2.87e-11;10!UBERON:0001443;2.27e-10;11!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.96e-34,3;UBERON:0005290,5.96e-34,3;UBERON:0010096,5.96e-34,3;UBERON:0001911,5.56e-26,4;UBERON:0005333,5.56e-26,4;UBERON:0008425,5.56e-26,4;UBERON:0005311,5.56e-26,4;UBERON:0002298,9.07e-18,6;UBERON:0000076,9.39e-14,8;UBERON:0000310,2.73e-11,10;UBERON:0001443,2.16e-10,11;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p13@LRP1B | |short_description=p13@LRP1B | ||
}} | }} |
Latest revision as of 04:56, 17 September 2015
Short description: | p13@LRP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LRP1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 165bp_to_ENST00000389484, NM_018557, uc002tvj.1, uc010fnl.1_5end |
EntrezGene: | LRP1B |
HGNC: | 6693 |
UniProt: | Q9NZR2Q96NT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.96e-34 | 3 |
myelencephalon | 5.96e-34 | 3 |
future myelencephalon | 5.96e-34 | 3 |
mammary gland | 5.56e-26 | 4 |
mammary bud | 5.56e-26 | 4 |
mammary ridge | 5.56e-26 | 4 |
mammary placode | 5.56e-26 | 4 |
brainstem | 9.07e-18 | 6 |
external ectoderm | 9.39e-14 | 8 |
breast | 2.73e-11 | 10 |
chest | 2.16e-10 | 11 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.56e-26 | 4 |
breast cancer | 5.56e-26 | 4 |