FFCP PHASE1:Hg19::chr11:20070858..20070863,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:20070858..20070863,-
|short_description=p5@NAV2-AS2
|description=CAGE_peak_5_at_NAV2-AS2_5end
|association_with_transcript=-9bp_to_ENST00000533767_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=40743 | |HGNC=40743 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000533767_5end | |||
|cluster_id=chr11:20070858..20070863,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_5_at_NAV2-AS2_5end | |||
|id=chr11:20070858..20070863,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.12e-50;1!UBERON:0010226;5.12e-50;1 | |||
|ontology_enrichment_disease=DOID:114!8.57e-32!2;DOID:178!1.21e-16!1;DOID:326!1.21e-16!1;DOID:3978!1.21e-16!1;DOID:3394!1.21e-16!1;DOID:5844!1.21e-16!1;DOID:1287!1.93e-16!4 | |||
|ontology_enrichment_disease_v019=DOID:114;5.56e-26;2!DOID:1287;1.00e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.56e-26,2;DOID:1287,1.00e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.32e-36!27;UBERON:0004151!1.17e-21!3;UBERON:0003978!1.76e-21!3;UBERON:0009751!1.76e-21!3;UBERON:0000946!1.76e-21!3;UBERON:0002523!1.76e-21!3;UBERON:0005983!1.76e-21!3;UBERON:0002165!1.76e-21!3;UBERON:0002062!1.76e-21!3;UBERON:0007280!1.76e-21!3;UBERON:0003103!2.80e-17!69;UBERON:0002079!6.47e-17!1;UBERON:0002084!7.57e-17!1;UBERON:0002082!7.57e-17!1;UBERON:0004706!7.57e-17!1;UBERON:0002146!8.86e-17!1;UBERON:0005623!8.86e-17!1;UBERON:0002135!1.04e-16!1;UBERON:0000948!4.39e-16!24;UBERON:0005498!4.39e-16!24;UBERON:0004140!4.39e-16!24;UBERON:0009881!4.39e-16!24;UBERON:0004141!4.39e-16!24;UBERON:0003084!4.39e-16!24;UBERON:0007005!4.39e-16!24;UBERON:0004139!4.39e-16!24;UBERON:0004291!4.39e-16!24;UBERON:0007023!5.08e-10!115;UBERON:0002081!4.02e-09!2;UBERON:0002133!5.08e-09!2;UBERON:0003127!8.09e-09!2;UBERON:0001009!4.21e-08!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.53e-66;3!UBERON:0002084;5.12e-50;1!UBERON:0002079;5.12e-50;1!UBERON:0002082;5.12e-50;1!UBERON:0007100;2.66e-32;25!UBERON:0002081;8.10e-26;2!UBERON:0000948;4.96e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,6.53e-66,3;UBERON:0002079,3.99e-50,1;UBERON:0002084,6.58e-50,1;UBERON:0002082,6.58e-50,1;UBERON:0010226,6.58e-50,1;UBERON:0007100,5.44e-30,27;UBERON:0002081,7.14e-26,2;UBERON:0010227,7.14e-26,2;UBERON:0003103,1.71e-12,68;UBERON:0000948,2.78e-09,24;UBERON:0005498,2.78e-09,24;UBERON:0004140,2.78e-09,24;UBERON:0009881,2.78e-09,24;UBERON:0004141,2.78e-09,24;UBERON:0003084,2.78e-09,24;UBERON:0007005,2.78e-09,24;UBERON:0004139,2.78e-09,24;UBERON:0004291,2.78e-09,24;UBERON:0001009,6.64e-08,112;UBERON:0007023,8.86e-08,114 | |||
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|short_description=p5@NAV2-AS2 | |||
}} | }} |
Latest revision as of 05:50, 17 September 2015
Short description: | p5@NAV2-AS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NAV2-AS2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -9bp_to_ENST00000533767_5end |
EntrezGene: | NA |
HGNC: | 40743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 6.53e-66 | 3 |
left cardiac atrium | 3.99e-50 | 1 |
heart left ventricle | 6.58e-50 | 1 |
cardiac ventricle | 6.58e-50 | 1 |
future cardiac ventricle | 6.58e-50 | 1 |
primary circulatory organ | 5.44e-30 | 27 |
cardiac atrium | 7.14e-26 | 2 |
future cardiac atrium | 7.14e-26 | 2 |
compound organ | 1.71e-12 | 68 |
heart | 2.78e-09 | 24 |
primitive heart tube | 2.78e-09 | 24 |
primary heart field | 2.78e-09 | 24 |
anterior lateral plate mesoderm | 2.78e-09 | 24 |
heart tube | 2.78e-09 | 24 |
heart primordium | 2.78e-09 | 24 |
cardiac mesoderm | 2.78e-09 | 24 |
cardiogenic plate | 2.78e-09 | 24 |
heart rudiment | 2.78e-09 | 24 |
circulatory system | 6.64e-08 | 112 |
adult organism | 8.86e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.56e-26 | 2 |
cardiovascular system disease | 1.00e-13 | 4 |