FFCP PHASE1:Hg19::chr15:34447023..34447038,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79768 | |EntrezGene=79768 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26199 | |HGNC=26199 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558473,ENST00000560308,ENST00000560310_5end | |association_with_transcript=0bp_to_ENST00000558473,ENST00000560308,ENST00000560310_5end | ||
|cluster_id=chr15:34447023..34447038,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_C15orf29_5end | |description=CAGE_peak_3_at_C15orf29_5end | ||
|id=chr15:34447023..34447038,- | |id=chr15:34447023..34447038,- | ||
|ontology_enrichment_celltype=CL:0002057!1.04e-22!42;CL:0000860!1.04e-21!45;CL:0000766!3.79e-14!76;CL:0002194!4.47e-12!63;CL:0000576!4.47e-12!63;CL:0000040!4.47e-12!63;CL:0000559!4.47e-12!63;CL:0002009!2.08e-11!65;CL:0000839!1.04e-10!70;CL:0000557!1.18e-09!71;CL:0000738!3.77e-09!140;CL:0000763!1.71e-08!112;CL:0000049!1.71e-08!112;CL:0002087!7.65e-07!119 | |ontology_enrichment_celltype=CL:0002057!1.04e-22!42;CL:0000860!1.04e-21!45;CL:0000766!3.79e-14!76;CL:0002194!4.47e-12!63;CL:0000576!4.47e-12!63;CL:0000040!4.47e-12!63;CL:0000559!4.47e-12!63;CL:0002009!2.08e-11!65;CL:0000839!1.04e-10!70;CL:0000557!1.18e-09!71;CL:0000738!3.77e-09!140;CL:0000763!1.71e-08!112;CL:0000049!1.71e-08!112;CL:0002087!7.65e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.40e-63;33!CL:0002057;4.40e-63;33!CL:0000473;3.89e-43;39!CL:0000234;3.89e-43;39!CL:0000576;2.11e-28;48!CL:0000766;2.32e-18;69!CL:0000763;5.64e-10;100!CL:0000775;7.11e-10;3!CL:0000094;1.19e-09;8!CL:0002087;3.43e-08;104!CL:0000771;1.51e-07;2!CL:0000081;6.89e-07;11!CL:0000738;8.15e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.17e-52,42;CL:0002057,1.17e-52,42;CL:0000473,5.23e-45,48;CL:0000234,5.23e-45,48;CL:0000766,7.61e-39,72;CL:0002194,2.57e-34,59;CL:0000576,2.57e-34,59;CL:0000040,2.57e-34,59;CL:0000559,2.57e-34,59;CL:0002009,6.14e-33,61;CL:0000839,7.39e-30,66;CL:0000557,2.69e-29,67;CL:0000763,4.42e-26,108;CL:0000049,4.42e-26,108;CL:0000738,1.30e-22,136;CL:0002032,1.61e-17,161;CL:0000837,1.61e-17,161;CL:0002087,1.96e-17,115;CL:0000037,2.27e-16,168;CL:0002031,2.33e-16,120;CL:0000988,4.98e-15,177;CL:0000775,6.91e-10,3;CL:0000094,1.16e-09,8;CL:0000771,1.51e-07,2;CL:0000081,6.80e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-39;42!CL:0000049;3.03e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.48e-14!102;UBERON:0003061!1.48e-14!102;UBERON:0002193!8.88e-13!112;UBERON:0007023!7.54e-09!115;UBERON:0002371!3.22e-08!80;UBERON:0000178!3.75e-08!15;UBERON:0000179!3.75e-08!15;UBERON:0000463!3.75e-08!15;UBERON:0001474!4.88e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.01e-15;15!UBERON:0000179;7.01e-15;15!UBERON:0000463;7.01e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.60e-34,98;UBERON:0003061,6.60e-34,98;UBERON:0002193,8.01e-30,108;UBERON:0002371,6.59e-25,76;UBERON:0001474,1.62e-22,82;UBERON:0004765,7.92e-20,90;UBERON:0002405,6.12e-19,93;UBERON:0001434,4.46e-17,100;UBERON:0000178,7.32e-15,15;UBERON:0000179,7.32e-15,15;UBERON:0000463,7.32e-15,15;UBERON:0003081,5.68e-13,203;UBERON:0002204,2.46e-07,167;UBERON:0000926,4.40e-07,315;UBERON:0004120,4.40e-07,315;UBERON:0006603,4.40e-07,315 | |||
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| ||
|short_description=p3@C15orf29 | |short_description=p3@C15orf29 | ||
}} | }} |
Latest revision as of 06:19, 17 September 2015
Short description: | p3@C15orf29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C15orf29_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000558473, ENST00000560308, ENST00000560310_5end |
EntrezGene: | C15orf29 |
HGNC: | 26199 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.17e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-52 | 42 |
defensive cell | 5.23e-45 | 48 |
phagocyte | 5.23e-45 | 48 |
myeloid leukocyte | 7.61e-39 | 72 |
monopoietic cell | 2.57e-34 | 59 |
monocyte | 2.57e-34 | 59 |
monoblast | 2.57e-34 | 59 |
promonocyte | 2.57e-34 | 59 |
macrophage dendritic cell progenitor | 6.14e-33 | 61 |
myeloid lineage restricted progenitor cell | 7.39e-30 | 66 |
granulocyte monocyte progenitor cell | 2.69e-29 | 67 |
myeloid cell | 4.42e-26 | 108 |
common myeloid progenitor | 4.42e-26 | 108 |
leukocyte | 1.30e-22 | 136 |
hematopoietic oligopotent progenitor cell | 1.61e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-17 | 161 |
nongranular leukocyte | 1.96e-17 | 115 |
hematopoietic stem cell | 2.27e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 2.33e-16 | 120 |
hematopoietic cell | 4.98e-15 | 177 |
neutrophil | 6.91e-10 | 3 |
granulocyte | 1.16e-09 | 8 |
eosinophil | 1.51e-07 | 2 |
blood cell | 6.80e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.60e-34 | 98 |
blood island | 6.60e-34 | 98 |
hemolymphoid system | 8.01e-30 | 108 |
bone marrow | 6.59e-25 | 76 |
bone element | 1.62e-22 | 82 |
skeletal element | 7.92e-20 | 90 |
immune system | 6.12e-19 | 93 |
skeletal system | 4.46e-17 | 100 |
blood | 7.32e-15 | 15 |
haemolymphatic fluid | 7.32e-15 | 15 |
organism substance | 7.32e-15 | 15 |
lateral plate mesoderm | 5.68e-13 | 203 |
musculoskeletal system | 2.46e-07 | 167 |
mesoderm | 4.40e-07 | 315 |
mesoderm-derived structure | 4.40e-07 | 315 |
presumptive mesoderm | 4.40e-07 | 315 |