FFCP PHASE1:Hg19::chr3:186857267..186857293,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:186857267..186857293,- to FFCP PHASE1:Hg19::chr3:186857267..186857293,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116832 | |EntrezGene=116832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17094 | |HGNC=17094 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EH5 | |UniProt=Q96EH5 | ||
|association_with_transcript=0bp_to_ENST00000455270_5end | |||
|cluster_id=chr3:186857267..186857293,- | |||
|description=CAGE_peak_1_at_RPL39L_5end | |||
|id=chr3:186857267..186857293,- | |||
|ontology_enrichment_celltype=CL:0000055!1.71e-16!180;CL:0002321!1.97e-14!248;CL:0000220!5.48e-14!246;CL:0000066!1.11e-11!254;CL:0000222!6.85e-10!119;CL:0000548!3.62e-09!679;CL:0000004!3.62e-09!679;CL:0000255!3.62e-09!679;CL:0000012!6.57e-09!682;CL:0000393!4.07e-08!60;CL:0000211!4.07e-08!60;CL:0000183!5.81e-08!59;CL:0000133!9.28e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.62e-15,250;CL:0000066,5.18e-12,253;CL:0000222,3.21e-10,121;CL:0000393,4.01e-08,61;CL:0000211,4.01e-08,61;CL:0000133,7.28e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!4.43e-11!238;UBERON:0009142!4.43e-11!238;UBERON:0002100!2.26e-09!216;UBERON:0000481!8.09e-09!347;UBERON:0005256!5.69e-08!143;UBERON:0000914!6.35e-08!83;UBERON:0002329!6.35e-08!83;UBERON:0003077!6.35e-08!83;UBERON:0003059!6.35e-08!83;UBERON:0007282!6.35e-08!83;UBERON:0009618!6.35e-08!83;UBERON:0007285!6.35e-08!83;UBERON:0000072!6.50e-08!46;UBERON:0004290!1.04e-07!70;UBERON:0008947!4.09e-07!38;UBERON:0003258!4.09e-07!38;UBERON:0001851!8.38e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.16e-07;37!UBERON:0001851;5.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.22e-10,78;UBERON:0002100,1.93e-09,199;UBERON:0000072,7.00e-08,47;UBERON:0002329,1.03e-07,71;UBERON:0003059,1.03e-07,71;UBERON:0007282,1.03e-07,71;UBERON:0004290,1.03e-07,71;UBERON:0009618,1.03e-07,71;UBERON:0007524,1.18e-07,73;UBERON:0003104,1.54e-07,160;UBERON:0009142,1.54e-07,160;UBERON:0003077,2.06e-07,72;UBERON:0007285,2.06e-07,72;UBERON:0008947,3.70e-07,38;UBERON:0003258,3.70e-07,38;UBERON:0001851,5.58e-07,15 | |||
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| ||
|short_description=p1@RPL39L | |||
}} | }} |
Latest revision as of 06:29, 17 September 2015
Short description: | p1@RPL39L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL39L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000455270_5end |
EntrezGene: | RPL39L |
HGNC: | 17094 |
UniProt: | Q96EH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.62e-15 | 250 |
epithelial cell | 5.18e-12 | 253 |
mesodermal cell | 3.21e-10 | 121 |
electrically responsive cell | 4.01e-08 | 61 |
electrically active cell | 4.01e-08 | 61 |
neurectodermal cell | 7.28e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 7.22e-10 | 78 |
trunk | 1.93e-09 | 199 |
segment of respiratory tract | 7.00e-08 | 47 |
somite | 1.03e-07 | 71 |
presomitic mesoderm | 1.03e-07 | 71 |
presumptive segmental plate | 1.03e-07 | 71 |
dermomyotome | 1.03e-07 | 71 |
trunk paraxial mesoderm | 1.03e-07 | 71 |
dense mesenchyme tissue | 1.18e-07 | 73 |
mesenchyme | 1.54e-07 | 160 |
entire embryonic mesenchyme | 1.54e-07 | 160 |
paraxial mesoderm | 2.06e-07 | 72 |
presumptive paraxial mesoderm | 2.06e-07 | 72 |
respiratory primordium | 3.70e-07 | 38 |
endoderm of foregut | 3.70e-07 | 38 |
cortex | 5.58e-07 | 15 |