FFCP PHASE1:Hg19::chr6:24667377..24667388,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51567 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17768 | |||
|TSSclassifier=strong | |||
|UniProt=O95551 | |||
|association_with_transcript=-116bp_to_ENST00000378198_5end | |||
|cluster_id=chr6:24667377..24667388,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_TDP2_5end | |||
|id=chr6:24667377..24667388,- | |||
|ontology_enrichment_celltype=CL:0002057!3.12e-52!42;CL:0000860!1.20e-51!45;CL:0002009!8.06e-43!65;CL:0002194!1.23e-41!63;CL:0000576!1.23e-41!63;CL:0000040!1.23e-41!63;CL:0000559!1.23e-41!63;CL:0000557!1.76e-38!71;CL:0000839!1.21e-36!70;CL:0000766!1.61e-35!76;CL:0000763!7.47e-23!112;CL:0000049!7.47e-23!112;CL:0002031!2.40e-18!124;CL:0002087!4.18e-18!119;CL:0000738!1.60e-16!140;CL:0002032!1.02e-12!165;CL:0000837!1.02e-12!165;CL:0000037!7.42e-12!172;CL:0000566!7.42e-12!172;CL:0000988!9.55e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.39e-84;33!CL:0002057;2.39e-84;33!CL:0000473;3.18e-58;39!CL:0000234;3.18e-58;39!CL:0000576;1.80e-34;48!CL:0000766;1.50e-22;69!CL:0002087;2.53e-13;104!CL:0000763;1.24e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.57e-70,42;CL:0002057,3.57e-70,42;CL:0000473,4.25e-61,48;CL:0000234,4.25e-61,48;CL:0002194,2.20e-48,59;CL:0000576,2.20e-48,59;CL:0000040,2.20e-48,59;CL:0000559,2.20e-48,59;CL:0002009,9.64e-47,61;CL:0000839,4.57e-43,66;CL:0000557,2.14e-42,67;CL:0000766,2.56e-39,72;CL:0000763,1.79e-25,108;CL:0000049,1.79e-25,108;CL:0002087,8.92e-24,115;CL:0002031,1.10e-22,120;CL:0000738,1.02e-19,136;CL:0002032,2.97e-16,161;CL:0000837,2.97e-16,161;CL:0000037,1.82e-15,168;CL:0000988,1.52e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.93e-52;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.49e-33!80;UBERON:0001474!2.90e-30!86;UBERON:0004765!2.99e-26!101;UBERON:0001434!2.99e-26!101;UBERON:0002405!6.91e-25!115;UBERON:0002390!3.70e-24!102;UBERON:0003061!3.70e-24!102;UBERON:0002193!3.13e-21!112;UBERON:0002204!1.67e-13!167;UBERON:0000062!4.05e-08!511;UBERON:0003081!9.72e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;9.73e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.83e-37,76;UBERON:0001474,2.85e-34,82;UBERON:0004765,4.95e-31,90;UBERON:0002405,5.87e-30,93;UBERON:0002390,2.59e-28,98;UBERON:0003061,2.59e-28,98;UBERON:0001434,1.06e-27,100;UBERON:0002193,1.79e-25,108;UBERON:0002204,1.23e-17,167;UBERON:0003081,2.48e-12,203;UBERON:0002108,9.73e-09,4;UBERON:0000926,5.33e-08,315;UBERON:0004120,5.33e-08,315;UBERON:0006603,5.33e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0,1.85943229524548,1.23350366406548,3.71647645074124,1.43846196161075,1.0246428261164,2.12834006899727,3.10271112662957,3.22742341791913,4.06279459783025,0.564727018627814,0.818718450173537,0.674170453335254,4.28517449319264,4.17207735198922,1.91801137739712,0,0,0.426224750532694,7.54544020434318,18.1563271901165,6.85104473895132,0.502497330513487,0.521482918420201,0.217188844705117,3.02699751316684,10.3117738076518,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63371354187996,5.02686989159102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@TDP2 | |||
}} |
Latest revision as of 06:29, 17 September 2015
Short description: | p7@TDP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TDP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -116bp_to_ENST00000378198_5end |
EntrezGene: | TDP2 |
HGNC: | 17768 |
UniProt: | O95551 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.57e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-70 | 42 |
defensive cell | 4.25e-61 | 48 |
phagocyte | 4.25e-61 | 48 |
monopoietic cell | 2.20e-48 | 59 |
monocyte | 2.20e-48 | 59 |
monoblast | 2.20e-48 | 59 |
promonocyte | 2.20e-48 | 59 |
macrophage dendritic cell progenitor | 9.64e-47 | 61 |
myeloid lineage restricted progenitor cell | 4.57e-43 | 66 |
granulocyte monocyte progenitor cell | 2.14e-42 | 67 |
myeloid leukocyte | 2.56e-39 | 72 |
myeloid cell | 1.79e-25 | 108 |
common myeloid progenitor | 1.79e-25 | 108 |
nongranular leukocyte | 8.92e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-22 | 120 |
leukocyte | 1.02e-19 | 136 |
hematopoietic oligopotent progenitor cell | 2.97e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.97e-16 | 161 |
hematopoietic stem cell | 1.82e-15 | 168 |
hematopoietic cell | 1.52e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.83e-37 | 76 |
bone element | 2.85e-34 | 82 |
skeletal element | 4.95e-31 | 90 |
immune system | 5.87e-30 | 93 |
hematopoietic system | 2.59e-28 | 98 |
blood island | 2.59e-28 | 98 |
skeletal system | 1.06e-27 | 100 |
hemolymphoid system | 1.79e-25 | 108 |
musculoskeletal system | 1.23e-17 | 167 |
lateral plate mesoderm | 2.48e-12 | 203 |
small intestine | 9.73e-09 | 4 |
mesoderm | 5.33e-08 | 315 |
mesoderm-derived structure | 5.33e-08 | 315 |
presumptive mesoderm | 5.33e-08 | 315 |