FFCP PHASE1:Hg19::chr1:27158505..27158520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84243 | |EntrezGene=84243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20712 | |HGNC=20712 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJS3 | |UniProt=E9PJS3 | ||
|association_with_transcript=0bp_to_ENST00000534643,uc010ofh.1_5end | |association_with_transcript=0bp_to_ENST00000534643,uc010ofh.1_5end | ||
|cluster_id=chr1:27158505..27158520,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_ZDHHC18_5end | |description=CAGE_peak_4_at_ZDHHC18_5end | ||
|id=chr1:27158505..27158520,+ | |id=chr1:27158505..27158520,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.02e-36!42;CL:0000860!1.38e-33!45;CL:0000738!1.18e-30!140;CL:0000766!2.57e-28!76;CL:0002087!1.34e-23!119;CL:0000037!8.32e-22!172;CL:0000566!8.32e-22!172;CL:0000988!1.52e-21!182;CL:0002032!2.88e-21!165;CL:0000837!2.88e-21!165;CL:0002194!1.14e-20!63;CL:0000576!1.14e-20!63;CL:0000040!1.14e-20!63;CL:0000559!1.14e-20!63;CL:0002009!9.42e-20!65;CL:0002031!9.85e-20!124;CL:0000839!1.07e-17!70;CL:0000763!1.46e-17!112;CL:0000049!1.46e-17!112;CL:0000557!2.55e-17!71;CL:0000094!4.09e-16!8;CL:0000081!7.65e-14!11;CL:0000775!1.53e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.02e-36!42;CL:0000860!1.38e-33!45;CL:0000738!1.18e-30!140;CL:0000766!2.57e-28!76;CL:0002087!1.34e-23!119;CL:0000037!8.32e-22!172;CL:0000566!8.32e-22!172;CL:0000988!1.52e-21!182;CL:0002032!2.88e-21!165;CL:0000837!2.88e-21!165;CL:0002194!1.14e-20!63;CL:0000576!1.14e-20!63;CL:0000040!1.14e-20!63;CL:0000559!1.14e-20!63;CL:0002009!9.42e-20!65;CL:0002031!9.85e-20!124;CL:0000839!1.07e-17!70;CL:0000763!1.46e-17!112;CL:0000049!1.46e-17!112;CL:0000557!2.55e-17!71;CL:0000094!4.09e-16!8;CL:0000081!7.65e-14!11;CL:0000775!1.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.76e-52;33!CL:0002057;2.76e-52;33!CL:0000473;2.72e-35;39!CL:0000234;2.72e-35;39!CL:0000576;2.27e-24;48!CL:0000094;8.53e-23;8!CL:0000766;1.78e-18;69!CL:0000081;2.09e-16;11!CL:0000775;2.31e-16;3!CL:0000763;8.94e-12;100!CL:0000771;1.73e-11;2!CL:0002087;1.01e-08;104!CL:0000738;1.20e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-44,42;CL:0002057,1.38e-44,42;CL:0000766,5.99e-42,72;CL:0000473,2.08e-38,48;CL:0000234,2.08e-38,48;CL:0002194,9.23e-30,59;CL:0000576,9.23e-30,59;CL:0000040,9.23e-30,59;CL:0000559,9.23e-30,59;CL:0002009,1.20e-28,61;CL:0000839,3.78e-26,66;CL:0000763,4.43e-26,108;CL:0000049,4.43e-26,108;CL:0000557,1.08e-25,67;CL:0000738,6.91e-25,136;CL:0000094,8.54e-23,8;CL:0000037,6.30e-19,168;CL:0002032,1.95e-18,161;CL:0000837,1.95e-18,161;CL:0002087,7.81e-18,115;CL:0000988,1.23e-17,177;CL:0000081,2.09e-16,11;CL:0000775,2.31e-16,3;CL:0002031,3.00e-15,120;CL:0000771,1.73e-11,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.45e-32;42!CL:0000049;8.09e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.74e-30!102;UBERON:0003061!1.74e-30!102;UBERON:0002193!3.45e-29!112;UBERON:0000178!2.05e-20!15;UBERON:0000179!2.05e-20!15;UBERON:0000463!2.05e-20!15;UBERON:0002371!2.25e-14!80;UBERON:0001474!9.07e-13!86;UBERON:0002405!4.28e-12!115;UBERON:0007023!8.81e-12!115;UBERON:0004765!1.22e-09!101;UBERON:0001434!1.22e-09!101;UBERON:0003081!1.70e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!1.74e-30!102;UBERON:0003061!1.74e-30!102;UBERON:0002193!3.45e-29!112;UBERON:0000178!2.05e-20!15;UBERON:0000179!2.05e-20!15;UBERON:0000463!2.05e-20!15;UBERON:0002371!2.25e-14!80;UBERON:0001474!9.07e-13!86;UBERON:0002405!4.28e-12!115;UBERON:0007023!8.81e-12!115;UBERON:0004765!1.22e-09!101;UBERON:0001434!1.22e-09!101;UBERON:0003081!1.70e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.14e-32;15!UBERON:0000179;9.14e-32;15!UBERON:0000463;9.14e-32;15!UBERON:0002390;1.64e-18;32!UBERON:0002193;7.17e-10;42!UBERON:0002106;5.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.78e-46,98;UBERON:0003061,7.78e-46,98;UBERON:0002193,5.44e-41,108;UBERON:0000178,8.73e-32,15;UBERON:0000179,8.73e-32,15;UBERON:0000463,8.73e-32,15;UBERON:0002371,3.96e-22,76;UBERON:0002405,4.13e-21,93;UBERON:0001474,3.49e-20,82;UBERON:0003081,1.25e-18,203;UBERON:0004765,5.44e-18,90;UBERON:0001434,9.67e-16,100;UBERON:0000926,1.56e-09,315;UBERON:0004120,1.56e-09,315;UBERON:0006603,1.56e-09,315;UBERON:0002204,1.21e-07,167;UBERON:0002106,6.39e-07,3;UBERON:0004854,6.39e-07,3;UBERON:0009034,6.39e-07,3;UBERON:0002095,6.39e-07,3;UBERON:0004782,6.39e-07,3;UBERON:0003281,6.39e-07,3;UBERON:0009664,6.39e-07,3;UBERON:0002296,6.39e-07,3;UBERON:0005602,6.39e-07,3;UBERON:0001179,6.39e-07,3;UBERON:0006293,6.39e-07,3 | |||
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| ||
|short_description=p4@ZDHHC18 | |short_description=p4@ZDHHC18 | ||
}} | }} |
Latest revision as of 06:36, 17 September 2015
Short description: | p4@ZDHHC18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZDHHC18_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000534643, uc010ofh.1_5end |
EntrezGene: | ZDHHC18 |
HGNC: | 20712 |
UniProt: | E9PJS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-44 | 42 |
myeloid leukocyte | 5.99e-42 | 72 |
defensive cell | 2.08e-38 | 48 |
phagocyte | 2.08e-38 | 48 |
monopoietic cell | 9.23e-30 | 59 |
monocyte | 9.23e-30 | 59 |
monoblast | 9.23e-30 | 59 |
promonocyte | 9.23e-30 | 59 |
macrophage dendritic cell progenitor | 1.20e-28 | 61 |
myeloid lineage restricted progenitor cell | 3.78e-26 | 66 |
myeloid cell | 4.43e-26 | 108 |
common myeloid progenitor | 4.43e-26 | 108 |
granulocyte monocyte progenitor cell | 1.08e-25 | 67 |
leukocyte | 6.91e-25 | 136 |
granulocyte | 8.54e-23 | 8 |
hematopoietic stem cell | 6.30e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.95e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-18 | 161 |
nongranular leukocyte | 7.81e-18 | 115 |
hematopoietic cell | 1.23e-17 | 177 |
blood cell | 2.09e-16 | 11 |
neutrophil | 2.31e-16 | 3 |
hematopoietic lineage restricted progenitor cell | 3.00e-15 | 120 |
eosinophil | 1.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.78e-46 | 98 |
blood island | 7.78e-46 | 98 |
hemolymphoid system | 5.44e-41 | 108 |
blood | 8.73e-32 | 15 |
haemolymphatic fluid | 8.73e-32 | 15 |
organism substance | 8.73e-32 | 15 |
bone marrow | 3.96e-22 | 76 |
immune system | 4.13e-21 | 93 |
bone element | 3.49e-20 | 82 |
lateral plate mesoderm | 1.25e-18 | 203 |
skeletal element | 5.44e-18 | 90 |
skeletal system | 9.67e-16 | 100 |
mesoderm | 1.56e-09 | 315 |
mesoderm-derived structure | 1.56e-09 | 315 |
presumptive mesoderm | 1.56e-09 | 315 |
musculoskeletal system | 1.21e-07 | 167 |
spleen | 6.39e-07 | 3 |
gastrointestinal system mesentery | 6.39e-07 | 3 |
stomach region | 6.39e-07 | 3 |
mesentery | 6.39e-07 | 3 |
gastrointestinal system serosa | 6.39e-07 | 3 |
mesentery of stomach | 6.39e-07 | 3 |
gut mesentery | 6.39e-07 | 3 |
dorsal mesentery | 6.39e-07 | 3 |
dorsal mesogastrium | 6.39e-07 | 3 |
peritoneal cavity | 6.39e-07 | 3 |
spleen primordium | 6.39e-07 | 3 |