FFCP PHASE1:Hg19::chr1:153651211..153651245,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4881 | |EntrezGene=4881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7943 | |HGNC=7943 | ||
|TSSclassifier=strong | |||
|UniProt=P16066 | |UniProt=P16066 | ||
|association_with_transcript=47bp_to_NM_000906,uc001fcs.3_5end | |association_with_transcript=47bp_to_NM_000906,uc001fcs.3_5end | ||
|cluster_id=chr1:153651211..153651245,+ | |||
|coexpression_cluster_id=C1838 | |coexpression_cluster_id=C1838 | ||
|description=CAGE_peak_3_at_NPR1_5end | |description=CAGE_peak_3_at_NPR1_5end | ||
|id=chr1:153651211..153651245,+ | |id=chr1:153651211..153651245,+ | ||
|ontology_enrichment_celltype=CL:0000136!4.73e-13!15 | |ontology_enrichment_celltype=CL:0000136!4.73e-13!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.23e-18;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.64e-17,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-24!115;UBERON:0003103!4.06e-10!69;UBERON:0000477!6.67e-10!286;UBERON:0001013!1.53e-09!14;UBERON:0002417!3.92e-08!61;UBERON:0000916!3.92e-08!61;UBERON:0004111!4.11e-08!241;UBERON:0009569!8.34e-08!113;UBERON:0000025!2.08e-07!194;UBERON:0000064!2.63e-07!219;UBERON:0001737!5.33e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.96e-24!115;UBERON:0003103!4.06e-10!69;UBERON:0000477!6.67e-10!286;UBERON:0001013!1.53e-09!14;UBERON:0002417!3.92e-08!61;UBERON:0000916!3.92e-08!61;UBERON:0004111!4.11e-08!241;UBERON:0009569!8.34e-08!113;UBERON:0000025!2.08e-07!194;UBERON:0000064!2.63e-07!219;UBERON:0001737!5.33e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.56e-10;9!UBERON:0001557;8.56e-10;9!UBERON:0007100;1.69e-09;25!UBERON:0001013;3.11e-08;14!UBERON:0004457;4.02e-08;9!UBERON:0000042;4.02e-08;9!UBERON:0003688;6.76e-08;6!UBERON:0002358;6.76e-08;6!UBERON:0003684;6.76e-08;6!UBERON:0001178;6.76e-08;6!UBERON:0000948;2.18e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.53e-18,114;UBERON:0003103,3.05e-11,68;UBERON:0001737,7.07e-10,9;UBERON:0007100,1.37e-09,27;UBERON:0002417,2.60e-09,60;UBERON:0000916,2.60e-09,60;UBERON:0001557,9.01e-09,19;UBERON:0001013,3.38e-08,14;UBERON:0004921,5.65e-08,118;UBERON:0009569,5.83e-08,112;UBERON:0003688,8.86e-08,6;UBERON:0002358,8.86e-08,6;UBERON:0003684,8.86e-08,6;UBERON:0001178,8.86e-08,6;UBERON:0000948,1.74e-07,24;UBERON:0005498,1.74e-07,24;UBERON:0004140,1.74e-07,24;UBERON:0009881,1.74e-07,24;UBERON:0004141,1.74e-07,24;UBERON:0003084,1.74e-07,24;UBERON:0007005,1.74e-07,24;UBERON:0004139,1.74e-07,24;UBERON:0004291,1.74e-07,24;UBERON:0004876,4.30e-07,11;UBERON:0004457,6.02e-07,12;UBERON:0000042,6.02e-07,12;UBERON:0000080,6.54e-07,9;UBERON:0002120,6.54e-07,9;UBERON:0004875,6.54e-07,9;UBERON:0005721,6.54e-07,9;UBERON:0005754,6.54e-07,9;UBERON:0007297,6.54e-07,9;UBERON:0001041,8.50e-07,87 | |||
|phase1_expression=18.7128730648673,16.4857403396057,36.6481450649525,21.0153926541574,36.6508097430376,17.4467704820074,27.8629865985142,4.42203911398782,39.4390298581756,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.45185470921107,0.821005894499457,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,36.5710299470943,3.35350429851818,4.47518966452356,0,0,0,0,0,0,0,0,5.63210024640164,0,0,2.92092654289215,3.13433527138681,1.32957960518865,0,0,0,0.596287222100115,0,0.347140501607594,2.26123176769604,1.25849830862972,0,0,1.55050055501597,2.84613010149368,1.33888245105868,0,0,0,1.47065232138347,0,3.03619076165871,4.4905874525234,3.71617885594963,0,0,0.732806975721629,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.860509862246441,0,0.560677600142307,0,0,8.40269795579369,1.75123873690594,16.3461903113459,0,0,0,0,0,0.747243402759005,0.939475989150119,0.971237666208789,0,0,0,0,0,0,3.64064544775211,0,0,0,0,0,0,0.150238058906597,1.58805056424029,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,2.83936320095625,5.05754070234305,3.61516544825223,4.19117096383097,4.35758888184812,3.79632990577755,4.58426447744559,6.67152981426177,4.61696588335668,14.763109092493,0,13.1703683626048,5.88034845542168,0,0,4.72631925345123,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.951270761172991,0,0.858486162094873,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,3.4214489204541,0,0.300343057843917,0,0,0,0,0,17.8828222925941,3.381211010224,2.12750493267896,2.08014873822732,0,0,0,2.14466990487221,0,0,0.977208552881205,3.19852753868291,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.937131319941706,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,4.21783273291921,0.306923946576125,0.280660094433074,24.2182992093275,1.02341449813341,1.44768529029247,13.3576259800492,0.154209693802656,0.355123450626254,0,0,0.232420756919918,0.483437798366489,0,0,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,1.56869953835371,0,0,3.4120015221269,2.04112446331819,1.0795795805107,1.54227252690289,2.43851793789468,6.02027728625824,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,4.01859945426117,0,0.165018999841176,0,0,0,0.096670718292122,0.308097234229289,1.07452572308291,0.551346289938122,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0.767693373934002,0.42793898803392,0,0,0,2.19629623788844,0.706874414074119,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,1.89996871767898,4.61012850143863,0.379473173765715,0,0,0,0,3.20088922641049,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,31.4992585434572,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,79.4999473121768,5.52567831062295,0.755798243562828,0.102268682502155,0,0,0,0,0,13.7114333835338,0,0,0,0.278304294485554,0,0,0,65.2499617891314,0,0,0,0,0,1.73624994933292,0.885741385813839,0.120596438625408,1.52581736317083,0.331737779793674,0.295547618953547,0,0.653630781113941,0.278847488557207,7.07942378234933,0,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.141353071433941,0.216388639742091,1.99052386215701,8.22655349881054,3.66618086960175,0,0,0,0.269604531922708,12.8412423567806,0.234264445725339,0,0,0,9.07544126553598,8.46935012340647,0,1.76922422959766,0,0.311064574191741,0,0,0,0,0.284609546029793,0,0,0,0,11.706686772216,0,12.1912977424247,10.4517723433245,8.12943024826771,8.43804443449249,46.0696981329631,2.03382666702479,0,0,0.0633107959558787,0.195551382734803,0.961905843018405,6.40358984218058,0,0.432271251462318,0,0,0,0.248505071130865,0.235694034616795,0,0,0,0.288950589901519,1.20084057741958,0,0,0,0.262887354279314,15.9190968725185,20.6244381610515,15.7932065406899,1.79711100449092,5.15071257763885,4.46342914883745,5.50904474391155,0,0,0,0,0,1.08270229666224,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,14.0274158992573,12.0121006829146,0,1.43429871466276,0.191915197319445,19.2967738120809,4.63464379255802,0,0,2.5926644736038,0,0,0.082092520749339,0,0,1.61207457045891,2.65013777824443,0.129282956361551,0.39669780522807,0.171086837884329,0,9.07693006825405,10.375484136578,28.9967338743037,4.46549419630756,0,0,0,56.0338337470558,43.1186617719044,35.842432481325,54.4268566978275,0,0,0.366078794705889,0,0,0.110929051536852,0.434674820589684,0.415045904808692,0,0,0.570930667089935,0,0,0,0.597019211547496,0.701139929541673,3.32883516901568,0,0,0,0,2.11723293268535,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0.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|short_description=p3@NPR1 | |short_description=p3@NPR1 | ||
}} | }} |
Latest revision as of 07:09, 17 September 2015
Short description: | p3@NPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NPR1_5end |
Coexpression cluster: | C1838_breast_aorta_extraskeletal_mature_Adipocyte_lung_Hepatic |
Association with transcript: | 47bp_to_NM_000906, uc001fcs.3_5end |
EntrezGene: | NPR1 |
HGNC: | 7943 |
UniProt: | P16066 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.64e-17 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.53e-18 | 114 |
compound organ | 3.05e-11 | 68 |
larynx | 7.07e-10 | 9 |
primary circulatory organ | 1.37e-09 | 27 |
abdominal segment of trunk | 2.60e-09 | 60 |
abdomen | 2.60e-09 | 60 |
upper respiratory tract | 9.01e-09 | 19 |
adipose tissue | 3.38e-08 | 14 |
subdivision of digestive tract | 5.65e-08 | 118 |
subdivision of trunk | 5.83e-08 | 112 |
omentum | 8.86e-08 | 6 |
peritoneum | 8.86e-08 | 6 |
abdominal cavity | 8.86e-08 | 6 |
visceral peritoneum | 8.86e-08 | 6 |
heart | 1.74e-07 | 24 |
primitive heart tube | 1.74e-07 | 24 |
primary heart field | 1.74e-07 | 24 |
anterior lateral plate mesoderm | 1.74e-07 | 24 |
heart tube | 1.74e-07 | 24 |
heart primordium | 1.74e-07 | 24 |
cardiac mesoderm | 1.74e-07 | 24 |
cardiogenic plate | 1.74e-07 | 24 |
heart rudiment | 1.74e-07 | 24 |
urogenital ridge | 4.30e-07 | 11 |
cavity lining | 6.02e-07 | 12 |
serous membrane | 6.02e-07 | 12 |
mesonephros | 6.54e-07 | 9 |
pronephros | 6.54e-07 | 9 |
nephrogenic cord | 6.54e-07 | 9 |
pronephric mesoderm | 6.54e-07 | 9 |
rostral part of nephrogenic cord | 6.54e-07 | 9 |
presumptive pronephric mesoderm | 6.54e-07 | 9 |
foregut | 8.50e-07 | 87 |