FFCP PHASE1:Hg19::chr12:129304510..129304516,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121260 | |EntrezGene=121260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23090 | |HGNC=23090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-98bp_to_ENST00000535272_5end | |||
|cluster_id=chr12:129304510..129304516,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_12_at_SLC15A4_5end | |||
|id=chr12:129304510..129304516,- | |||
|ontology_enrichment_celltype=CL:0000946!2.75e-14!1;CL:0000786!2.75e-14!1;CL:0000980!2.75e-14!1;CL:0000945!3.62e-09!24;CL:0000826!3.62e-09!24;CL:0000785!8.60e-08!2;CL:0000955!8.60e-08!2;CL:0000818!8.60e-08!2;CL:0000954!8.60e-08!2;CL:0000816!8.60e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.65e-15;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001896!7.94e-19!3;UBERON:0005290!7.94e-19!3;UBERON:0010096!7.94e-19!3;UBERON:0003296!2.26e-14!4;UBERON:0010133!2.26e-14!4;UBERON:0002336!2.41e-14!1;UBERON:0001018!2.41e-14!1;UBERON:0002473!2.41e-14!1;UBERON:0005340!2.41e-14!1;UBERON:0002316!2.41e-14!1;UBERON:0003544!2.41e-14!1;UBERON:0001020!2.41e-14!1;UBERON:0005970!2.41e-14!1;UBERON:0002437!2.41e-14!1;UBERON:0001894!1.32e-08!7;UBERON:0006222!1.32e-08!7;UBERON:0001905!4.38e-08!2;UBERON:0002757!4.38e-08!2;UBERON:0010134!4.38e-08!2;UBERON:0002784!4.38e-08!2;UBERON:0005408!4.38e-08!2;UBERON:0001899!4.38e-08!2;UBERON:0000007!5.74e-08!2;UBERON:0005162!8.04e-08!2;UBERON:0000122!8.04e-08!2;UBERON:0002298!1.23e-07!8;UBERON:0005743!8.36e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.27e-34;3!UBERON:0001896;5.96e-34;3!UBERON:0005290;5.96e-34;3!UBERON:0004177;4.21e-21;5!UBERON:0005057;4.21e-21;5!UBERON:0002298;9.07e-18;6!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13!UBERON:0002075;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.27e-34,3;UBERON:0004854,4.27e-34,3;UBERON:0009034,4.27e-34,3;UBERON:0002095,4.27e-34,3;UBERON:0004782,4.27e-34,3;UBERON:0003281,4.27e-34,3;UBERON:0009664,4.27e-34,3;UBERON:0002296,4.27e-34,3;UBERON:0005602,4.27e-34,3;UBERON:0001179,4.27e-34,3;UBERON:0006293,4.27e-34,3;UBERON:0001896,5.96e-34,3;UBERON:0005290,5.96e-34,3;UBERON:0010096,5.96e-34,3;UBERON:0002298,9.07e-18,6;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12;UBERON:0003887,1.22e-09,12;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15;UBERON:0002075,7.18e-07,18 | |||
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|short_description=p12@SLC15A4 | |||
}} | }} |
Latest revision as of 07:38, 17 September 2015
Short description: | p12@SLC15A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC15A4_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -98bp_to_ENST00000535272_5end |
EntrezGene: | SLC15A4 |
HGNC: | 23090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 4.27e-34 | 3 |
gastrointestinal system mesentery | 4.27e-34 | 3 |
stomach region | 4.27e-34 | 3 |
mesentery | 4.27e-34 | 3 |
gastrointestinal system serosa | 4.27e-34 | 3 |
mesentery of stomach | 4.27e-34 | 3 |
gut mesentery | 4.27e-34 | 3 |
dorsal mesentery | 4.27e-34 | 3 |
dorsal mesogastrium | 4.27e-34 | 3 |
peritoneal cavity | 4.27e-34 | 3 |
spleen primordium | 4.27e-34 | 3 |
medulla oblongata | 5.96e-34 | 3 |
myelencephalon | 5.96e-34 | 3 |
future myelencephalon | 5.96e-34 | 3 |
brainstem | 9.07e-18 | 6 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
intraembryonic coelom | 1.22e-09 | 12 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.73e-11 | 10 |