FFCP PHASE1:Hg19::chr16:66600315..66600370,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113540 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19172 | |||
|TSSclassifier=strong | |||
|UniProt=Q6PEV5,E9PIL3,Q8IZ96,E9PAX0 | |||
|association_with_transcript=0bp_to_ENST00000379500,ENST00000533953,NM_052999,NM_181268,uc002epm.3,uc002epn.3,uc002epo.3,uc002epp.3,uc002epq.3,uc002epr.3,uc010cds.2_5end | |||
|cluster_id=chr16:66600315..66600370,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_CMTM1_5end | |||
|id=chr16:66600315..66600370,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.57e-09;2!CL:0002582;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.03e-17;1!UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10!UBERON:0003056;9.11e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.03e-17;1!UBERON:0001785;1.03e-17;1!UBERON:0002464;1.03e-17;1!UBERON:0004904;1.03e-17;1!UBERON:0001021;1.03e-17;1!UBERON:0003714;1.57e-09;2!UBERON:0005162;1.57e-09;2!UBERON:0000122;1.57e-09;2!UBERON:0000473;1.99e-09;8!UBERON:0003135;4.30e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.72e-18,1;UBERON:0001785,8.72e-18,1;UBERON:0002464,8.72e-18,1;UBERON:0004904,8.72e-18,1;UBERON:0001021,8.72e-18,1;UBERON:0003902,8.72e-18,1;UBERON:0005425,8.72e-18,1;UBERON:0003714,1.44e-09,2;UBERON:0005162,1.44e-09,2;UBERON:0000122,1.44e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.726991193897824,0.377875943688809,1.21292030593908,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,29.0773547604922,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0.80823028409406,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.264145302039678,0,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,1.55776328755086,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0.962479855263359,0,0,0.144269212976445,0.0711418433484141,0.797131363644112,0,0,0.635020748171649,0,0.280797178113459,0.456469358066384,0.156679895773023,0,0.338583555603207,0.321176150207399,0,0,0.343505344755765,0,0,0,0.781552381608161,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0.568272293612826,0,0,0.307160702099232,0,0.281338832821026,0.445234820091624,0,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0.173624994933292,0,0.361789315876224,0,0.774054819518572,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.183195186803725,0,2.04386596391473,0,0.166211681900156,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0.141353071433941,0.432777279484182,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0.728341138602278,0,1.20990716048664,0.61214552326098,0,0,0,0,0.661983911750998,0,0,0,0.416024019039416,0,0,0.0870592065804026,0.698906672968121,0,0,0.0730893170861856,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0,0,0,0.240476460754601,0,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.164831716762333,0.337017719270924,0.196854963029498,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0.886068179966986,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0.468334905806882,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.318593534327405,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0.428883182749851,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0.320075189082423,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0,0,1.42769420259154,0.196295437002051,0.11796972334774,0,0.231051332300676,0.381382095467167,0,0.397832444232549,0.225630985047772,0.20170506870352,0,0,0,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| |||
|short_description=p2@CMTM1 | |||
}} |
Latest revision as of 08:37, 17 September 2015
Short description: | p2@CMTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CMTM1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000379500, ENST00000533953, NM_052999, NM_181268, uc002epm.3, uc002epn.3, uc002epo.3, uc002epp.3, uc002epq.3, uc002epr.3, uc010cds.2_5end |
EntrezGene: | CMTM1 |
HGNC: | 19172 |
UniProt: | Q6PEV5E9PIL3Q8IZ96E9PAX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.72e-18 | 1 |
cranial nerve | 8.72e-18 | 1 |
nerve trunk | 8.72e-18 | 1 |
nerve connecting eye with brain | 8.72e-18 | 1 |
nerve | 8.72e-18 | 1 |
retinal neural layer | 8.72e-18 | 1 |
presumptive neural retina | 8.72e-18 | 1 |
neural tissue | 1.44e-09 | 2 |
multi cell component structure | 1.44e-09 | 2 |
neuron projection bundle | 1.44e-09 | 2 |
testis | 1.99e-09 | 8 |
male reproductive organ | 4.30e-07 | 11 |