FFCP PHASE1:Hg19::chr16:66620806..66620817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146225 | |EntrezGene=146225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19173 | |HGNC=19173 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000532362_5end | |association_with_transcript=0bp_to_ENST00000532362_5end | ||
|cluster_id=chr16:66620806..66620817,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_CMTM2_5end | |description=CAGE_peak_4_at_CMTM2_5end | ||
|id=chr16:66620806..66620817,+ | |id=chr16:66620806..66620817,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.98e-67!42;CL:0000860!3.79e-62!45;CL:0000766!3.49e-54!76;CL:0002194!5.96e-41!63;CL:0000576!5.96e-41!63;CL:0000040!5.96e-41!63;CL:0000559!5.96e-41!63;CL:0002009!1.97e-39!65;CL:0000738!5.86e-38!140;CL:0000839!5.19e-36!70;CL:0000557!2.20e-35!71;CL:0000763!2.15e-33!112;CL:0000049!2.15e-33!112;CL:0002087!5.27e-30!119;CL:0002032!7.24e-29!165;CL:0000837!7.24e-29!165;CL:0000037!1.26e-28!172;CL:0000566!1.26e-28!172;CL:0002031!9.23e-27!124;CL:0000988!2.19e-26!182;CL:0000094!6.59e-24!8;CL:0000081!5.80e-17!11;CL:0000775!1.37e-10!3;CL:0000767!4.54e-09!3;CL:0000771!1.03e-07!2;CL:0000134!1.19e-07!358;CL:0002320!2.71e-07!365 | |ontology_enrichment_celltype=CL:0002057!2.98e-67!42;CL:0000860!3.79e-62!45;CL:0000766!3.49e-54!76;CL:0002194!5.96e-41!63;CL:0000576!5.96e-41!63;CL:0000040!5.96e-41!63;CL:0000559!5.96e-41!63;CL:0002009!1.97e-39!65;CL:0000738!5.86e-38!140;CL:0000839!5.19e-36!70;CL:0000557!2.20e-35!71;CL:0000763!2.15e-33!112;CL:0000049!2.15e-33!112;CL:0002087!5.27e-30!119;CL:0002032!7.24e-29!165;CL:0000837!7.24e-29!165;CL:0000037!1.26e-28!172;CL:0000566!1.26e-28!172;CL:0002031!9.23e-27!124;CL:0000988!2.19e-26!182;CL:0000094!6.59e-24!8;CL:0000081!5.80e-17!11;CL:0000775!1.37e-10!3;CL:0000767!4.54e-09!3;CL:0000771!1.03e-07!2;CL:0000134!1.19e-07!358;CL:0002320!2.71e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000094;6.44e-27;8!CL:0000775;2.07e-26;3!CL:0000860;1.20e-20;33!CL:0002057;1.20e-20;33!CL:0000081;1.48e-19;11!CL:0000771;1.73e-18;2!CL:0000473;2.43e-15;39!CL:0000234;2.43e-15;39!CL:0000766;4.16e-11;69!CL:0000576;1.67e-09;48!CL:0000763;8.63e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,6.44e-27,8;CL:0000775,2.07e-26,3;CL:0000766,7.95e-23,72;CL:0000081,1.48e-19,11;CL:0000771,1.73e-18,2;CL:0000860,1.06e-17,42;CL:0002057,1.06e-17,42;CL:0000473,2.66e-15,48;CL:0000234,2.66e-15,48;CL:0000763,2.00e-14,108;CL:0000049,2.00e-14,108;CL:0002194,6.13e-12,59;CL:0000576,6.13e-12,59;CL:0000040,6.13e-12,59;CL:0000559,6.13e-12,59;CL:0002009,1.67e-11,61;CL:0000738,6.15e-11,136;CL:0000839,1.56e-10,66;CL:0000557,2.35e-10,67;CL:0002032,7.67e-09,161;CL:0000837,7.67e-09,161;CL:0000037,2.30e-08,168;CL:0000988,8.27e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.62e-47!102;UBERON:0003061!4.62e-47!102;UBERON:0002193!4.76e-44!112;UBERON:0002371!1.91e-30!80;UBERON:0001474!1.01e-27!86;UBERON:0002405!6.87e-23!115;UBERON:0004765!2.45e-22!101;UBERON:0001434!2.45e-22!101;UBERON:0000178!2.41e-19!15;UBERON:0000179!2.41e-19!15;UBERON:0000463!2.41e-19!15;UBERON:0003081!3.20e-16!216;UBERON:0002204!4.40e-11!167;UBERON:0002384!2.51e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.10e-44;15!UBERON:0000179;3.10e-44;15!UBERON:0000463;3.10e-44;15!UBERON:0002390;2.05e-18;32!UBERON:0002193;2.78e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.11e-44,15;UBERON:0000179,3.11e-44,15;UBERON:0000463,3.11e-44,15;UBERON:0002390,6.96e-27,98;UBERON:0003061,6.96e-27,98;UBERON:0002193,3.97e-24,108;UBERON:0003081,2.21e-11,203;UBERON:0002371,5.74e-09,76;UBERON:0001474,3.29e-08,82;UBERON:0004765,2.35e-07,90;UBERON:0002405,4.51e-07,93 | |||
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| ||
|short_description=p4@CMTM2 | |short_description=p4@CMTM2 | ||
}} | }} |
Latest revision as of 08:43, 17 September 2015
Short description: | p4@CMTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CMTM2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000532362_5end |
EntrezGene: | CMTM2 |
HGNC: | 19173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 6.44e-27 | 8 |
neutrophil | 2.07e-26 | 3 |
myeloid leukocyte | 7.95e-23 | 72 |
blood cell | 1.48e-19 | 11 |
eosinophil | 1.73e-18 | 2 |
classical monocyte | 1.06e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-17 | 42 |
defensive cell | 2.66e-15 | 48 |
phagocyte | 2.66e-15 | 48 |
myeloid cell | 2.00e-14 | 108 |
common myeloid progenitor | 2.00e-14 | 108 |
monopoietic cell | 6.13e-12 | 59 |
monocyte | 6.13e-12 | 59 |
monoblast | 6.13e-12 | 59 |
promonocyte | 6.13e-12 | 59 |
macrophage dendritic cell progenitor | 1.67e-11 | 61 |
leukocyte | 6.15e-11 | 136 |
myeloid lineage restricted progenitor cell | 1.56e-10 | 66 |
granulocyte monocyte progenitor cell | 2.35e-10 | 67 |
hematopoietic oligopotent progenitor cell | 7.67e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.67e-09 | 161 |
hematopoietic stem cell | 2.30e-08 | 168 |
hematopoietic cell | 8.27e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.11e-44 | 15 |
haemolymphatic fluid | 3.11e-44 | 15 |
organism substance | 3.11e-44 | 15 |
hematopoietic system | 6.96e-27 | 98 |
blood island | 6.96e-27 | 98 |
hemolymphoid system | 3.97e-24 | 108 |
lateral plate mesoderm | 2.21e-11 | 203 |
bone marrow | 5.74e-09 | 76 |
bone element | 3.29e-08 | 82 |
skeletal element | 2.35e-07 | 90 |
immune system | 4.51e-07 | 93 |