FFCP PHASE1:Hg19::chr9:35754222..35754237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=692094 | |EntrezGene=692094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29663 | |HGNC=29663 | ||
|TSSclassifier=strong | |||
|UniProt=Q1L6U9 | |UniProt=Q1L6U9 | ||
|association_with_transcript=28bp_to_ENST00000436428_5end | |association_with_transcript=28bp_to_ENST00000436428_5end | ||
|cluster_id=chr9:35754222..35754237,- | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_3_at_MSMP_5end | |description=CAGE_peak_3_at_MSMP_5end | ||
|id=chr9:35754222..35754237,- | |id=chr9:35754222..35754237,- | ||
|ontology_enrichment_celltype=CL:0002139!6.43e-50!24;CL:0000115!4.92e-41!35;CL:0000071!1.30e-35!18;CL:0002546!1.30e-35!18;CL:0002078!1.36e-31!44;CL:0002543!2.48e-25!6;CL:0000213!3.12e-23!57;CL:0000215!3.12e-23!57;CL:0005020!7.31e-16!6;CL:0002138!7.31e-16!6;CL:0005022!7.31e-16!6;CL:0002618!1.68e-13!3;CL:0000064!8.46e-13!3;CL:0005012!8.46e-13!3;CL:0000067!8.46e-13!3;CL:0002304!8.46e-13!3;CL:0000708!1.53e-12!3;CL:1000413!7.84e-11!9;CL:0000222!1.08e-09!119;CL:0000306!1.21e-09!4;CL:0002222!1.21e-09!4;CL:0002224!1.21e-09!4;CL:0002549!1.62e-08!2;CL:0002575!2.29e-08!2;CL:0002602!2.29e-08!2;CL:0000076!3.07e-08!62;CL:0000066!9.17e-08!254;CL:0000669!2.44e-07!5;CL:0000327!8.28e-07!14 | |ontology_enrichment_celltype=CL:0002139!6.43e-50!24;CL:0000115!4.92e-41!35;CL:0000071!1.30e-35!18;CL:0002546!1.30e-35!18;CL:0002078!1.36e-31!44;CL:0002543!2.48e-25!6;CL:0000213!3.12e-23!57;CL:0000215!3.12e-23!57;CL:0005020!7.31e-16!6;CL:0002138!7.31e-16!6;CL:0005022!7.31e-16!6;CL:0002618!1.68e-13!3;CL:0000064!8.46e-13!3;CL:0005012!8.46e-13!3;CL:0000067!8.46e-13!3;CL:0002304!8.46e-13!3;CL:0000708!1.53e-12!3;CL:1000413!7.84e-11!9;CL:0000222!1.08e-09!119;CL:0000306!1.21e-09!4;CL:0002222!1.21e-09!4;CL:0002224!1.21e-09!4;CL:0002549!1.62e-08!2;CL:0002575!2.29e-08!2;CL:0002602!2.29e-08!2;CL:0000076!3.07e-08!62;CL:0000066!9.17e-08!254;CL:0000669!2.44e-07!5;CL:0000327!8.28e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002543;3.10e-79;6!CL:0002618;1.83e-40;3!CL:0000071;1.49e-35;18!CL:0002139;1.42e-26;24!CL:0000064;1.04e-18;3!CL:0000067;1.04e-18;3!CL:0005012;1.04e-18;3!CL:0002304;1.04e-18;3!CL:0000115;7.46e-18;36!CL:0000342;2.25e-14;1!CL:0002565;2.25e-14;1!CL:0000306;3.85e-14;4!CL:0002222;3.85e-14;4!CL:0002224;3.85e-14;4!CL:0000213;1.06e-09;58!CL:0000215;1.06e-09;58!CL:0002078;1.73e-09;45!CL:0000076;1.62e-08;63!CL:0000075;4.09e-08;27!CL:0002262;5.55e-08;2!CL:1000398;5.55e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,1.81e-79,6;CL:0002618,1.71e-40,3;CL:0000071,1.38e-35,18;CL:0002546,1.38e-35,18;CL:0002139,1.34e-26,24;CL:0000115,6.70e-23,36;CL:0000064,1.24e-18,3;CL:0000067,1.24e-18,3;CL:0005012,1.24e-18,3;CL:0002304,1.24e-18,3;CL:0002078,3.47e-18,45;CL:0000342,2.41e-14,1;CL:0002565,2.41e-14,1;CL:0000306,3.61e-14,4;CL:0002222,3.61e-14,4;CL:0002224,3.61e-14,4;CL:0000213,5.98e-14,58;CL:0000215,5.98e-14,58;CL:0000076,8.00e-10,63;CL:0000066,9.56e-09,253;CL:0000075,4.16e-08,27;CL:0002262,5.02e-08,2;CL:1000398,5.02e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.49e-35;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.30e-35!18;UBERON:0004638!1.30e-35!18;UBERON:0004852!1.30e-35!18;UBERON:0000487!1.41e-28!22;UBERON:0002049!8.69e-28!79;UBERON:0007798!8.69e-28!79;UBERON:0006914!8.83e-25!25;UBERON:0004535!8.00e-20!110;UBERON:0001009!4.04e-19!113;UBERON:0007625!3.56e-17!11;UBERON:0002200!1.02e-16!11;UBERON:0006876!1.02e-16!11;UBERON:0001638!1.19e-16!9;UBERON:0003920!1.19e-16!9;UBERON:0004582!1.19e-16!9;UBERON:0000488!1.32e-16!4;UBERON:0000055!2.26e-16!69;UBERON:0001801!2.83e-13!14;UBERON:0001778!8.46e-13!3;UBERON:0001775!8.46e-13!3;UBERON:0003210!1.53e-12!3;UBERON:0001473!7.81e-12!8;UBERON:0004536!7.81e-12!8;UBERON:0006558!7.81e-12!8;UBERON:0002203!4.30e-11!6;UBERON:0001768!4.30e-11!6;UBERON:0003915!7.84e-11!9;UBERON:0004700!7.84e-11!9;UBERON:0001917!7.84e-11!9;UBERON:0001981!3.65e-10!60;UBERON:0007500!3.65e-10!60;UBERON:0004537!3.65e-10!60;UBERON:0006965!3.65e-10!60;UBERON:0010077!1.21e-09!4;UBERON:0005389!1.21e-09!4;UBERON:0000484!1.21e-09!4;UBERON:0002546!1.21e-09!4;UBERON:0000965!1.21e-09!4;UBERON:0001803!1.21e-09!4;UBERON:0003073!1.21e-09!4;UBERON:0005426!1.21e-09!4;UBERON:0000019!1.64e-09!19;UBERON:0000047!1.64e-09!19;UBERON:0004088!1.64e-09!19;UBERON:0003072!1.64e-09!19;UBERON:0003071!1.64e-09!19;UBERON:0004128!1.64e-09!19;UBERON:0000477!1.84e-09!286;UBERON:0002465!2.07e-09!10;UBERON:0000970!5.52e-09!20;UBERON:0003947!1.62e-08!2;UBERON:0005629!1.62e-08!2;UBERON:0005358!1.62e-08!2;UBERON:0001886!1.62e-08!2;UBERON:0004086!1.62e-08!2;UBERON:0005282!1.62e-08!2;UBERON:0005281!1.62e-08!2;UBERON:0002104!1.65e-08!21;UBERON:0001456!1.65e-08!21;UBERON:0009568!2.29e-08!2;UBERON:0002216!2.29e-08!2;UBERON:0002209!2.29e-08!2;UBERON:0002213!2.29e-08!2;UBERON:0004267!2.29e-08!2;UBERON:0006444!2.29e-08!2;UBERON:0001995!2.29e-08!2;UBERON:0004715!2.29e-08!2;UBERON:0001468!2.29e-08!2;UBERON:0001130!2.29e-08!2;UBERON:0001066!2.29e-08!2;UBERON:0002066!2.95e-08!5;UBERON:0000020!1.11e-07!23;UBERON:0004872!2.07e-07!84;UBERON:0005284!2.28e-07!5;UBERON:0003586!2.44e-07!5;UBERON:0001032!2.56e-07!24;UBERON:0004456!2.56e-07!24;UBERON:0000490!6.41e-07!138 | |ontology_enrichment_uberon=UBERON:0001986!1.30e-35!18;UBERON:0004638!1.30e-35!18;UBERON:0004852!1.30e-35!18;UBERON:0000487!1.41e-28!22;UBERON:0002049!8.69e-28!79;UBERON:0007798!8.69e-28!79;UBERON:0006914!8.83e-25!25;UBERON:0004535!8.00e-20!110;UBERON:0001009!4.04e-19!113;UBERON:0007625!3.56e-17!11;UBERON:0002200!1.02e-16!11;UBERON:0006876!1.02e-16!11;UBERON:0001638!1.19e-16!9;UBERON:0003920!1.19e-16!9;UBERON:0004582!1.19e-16!9;UBERON:0000488!1.32e-16!4;UBERON:0000055!2.26e-16!69;UBERON:0001801!2.83e-13!14;UBERON:0001778!8.46e-13!3;UBERON:0001775!8.46e-13!3;UBERON:0003210!1.53e-12!3;UBERON:0001473!7.81e-12!8;UBERON:0004536!7.81e-12!8;UBERON:0006558!7.81e-12!8;UBERON:0002203!4.30e-11!6;UBERON:0001768!4.30e-11!6;UBERON:0003915!7.84e-11!9;UBERON:0004700!7.84e-11!9;UBERON:0001917!7.84e-11!9;UBERON:0001981!3.65e-10!60;UBERON:0007500!3.65e-10!60;UBERON:0004537!3.65e-10!60;UBERON:0006965!3.65e-10!60;UBERON:0010077!1.21e-09!4;UBERON:0005389!1.21e-09!4;UBERON:0000484!1.21e-09!4;UBERON:0002546!1.21e-09!4;UBERON:0000965!1.21e-09!4;UBERON:0001803!1.21e-09!4;UBERON:0003073!1.21e-09!4;UBERON:0005426!1.21e-09!4;UBERON:0000019!1.64e-09!19;UBERON:0000047!1.64e-09!19;UBERON:0004088!1.64e-09!19;UBERON:0003072!1.64e-09!19;UBERON:0003071!1.64e-09!19;UBERON:0004128!1.64e-09!19;UBERON:0000477!1.84e-09!286;UBERON:0002465!2.07e-09!10;UBERON:0000970!5.52e-09!20;UBERON:0003947!1.62e-08!2;UBERON:0005629!1.62e-08!2;UBERON:0005358!1.62e-08!2;UBERON:0001886!1.62e-08!2;UBERON:0004086!1.62e-08!2;UBERON:0005282!1.62e-08!2;UBERON:0005281!1.62e-08!2;UBERON:0002104!1.65e-08!21;UBERON:0001456!1.65e-08!21;UBERON:0009568!2.29e-08!2;UBERON:0002216!2.29e-08!2;UBERON:0002209!2.29e-08!2;UBERON:0002213!2.29e-08!2;UBERON:0004267!2.29e-08!2;UBERON:0006444!2.29e-08!2;UBERON:0001995!2.29e-08!2;UBERON:0004715!2.29e-08!2;UBERON:0001468!2.29e-08!2;UBERON:0001130!2.29e-08!2;UBERON:0001066!2.29e-08!2;UBERON:0002066!2.95e-08!5;UBERON:0000020!1.11e-07!23;UBERON:0004872!2.07e-07!84;UBERON:0005284!2.28e-07!5;UBERON:0003586!2.44e-07!5;UBERON:0001032!2.56e-07!24;UBERON:0004456!2.56e-07!24;UBERON:0000490!6.41e-07!138 | ||
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|short_description=p3@MSMP | |short_description=p3@MSMP | ||
}} | }} |
Latest revision as of 08:52, 17 September 2015
Short description: | p3@MSMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MSMP_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | 28bp_to_ENST00000436428_5end |
EntrezGene: | MSMP |
HGNC: | 29663 |
UniProt: | Q1L6U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 1.81e-79 | 6 |
endothelial cell of umbilical vein | 1.71e-40 | 3 |
blood vessel endothelial cell | 1.38e-35 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.38e-35 | 18 |
endothelial cell of vascular tree | 1.34e-26 | 24 |
endothelial cell | 6.70e-23 | 36 |
ciliated cell | 1.24e-18 | 3 |
ciliated epithelial cell | 1.24e-18 | 3 |
multi-ciliated epithelial cell | 1.24e-18 | 3 |
non-pigmented ciliary epithelial cell | 1.24e-18 | 3 |
meso-epithelial cell | 3.47e-18 | 45 |
pigment cell (sensu Vertebrata) | 2.41e-14 | 1 |
iris pigment epithelial cell | 2.41e-14 | 1 |
crystallin accumulating cell | 3.61e-14 | 4 |
vertebrate lens cell | 3.61e-14 | 4 |
lens epithelial cell | 3.61e-14 | 4 |
lining cell | 5.98e-14 | 58 |
barrier cell | 5.98e-14 | 58 |
squamous epithelial cell | 8.00e-10 | 63 |
epithelial cell | 9.56e-09 | 253 |
columnar/cuboidal epithelial cell | 4.16e-08 | 27 |
endothelial cell of sinusoid | 5.02e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.02e-08 | 2 |