FFCP PHASE1:Hg19::chr1:154377929..154377951,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9R8 | |UniProt=D6R9R8 | ||
|association_with_transcript=-139bp_to_ENST00000512471_5end | |association_with_transcript=-139bp_to_ENST00000512471_5end | ||
|cluster_id=chr1:154377929..154377951,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_IL6R_5end | |description=CAGE_peak_3_at_IL6R_5end | ||
|id=chr1:154377929..154377951,+ | |id=chr1:154377929..154377951,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.40e-37!76;CL:0000557!2.97e-34!71;CL:0002009!1.22e-33!65;CL:0002194!2.14e-32!63;CL:0000576!2.14e-32!63;CL:0000040!2.14e-32!63;CL:0000559!2.14e-32!63;CL:0000763!1.70e-31!112;CL:0000049!1.70e-31!112;CL:0000839!3.08e-30!70;CL:0002057!7.38e-29!42;CL:0000860!5.58e-26!45;CL:0000738!1.22e-21!140;CL:0000037!1.03e-19!172;CL:0000566!1.03e-19!172;CL:0000988!4.05e-19!182;CL:0002032!3.73e-18!165;CL:0000837!3.73e-18!165;CL:0002087!1.73e-15!119;CL:0002031!3.32e-15!124;CL:0002320!8.88e-07!365 | |ontology_enrichment_celltype=CL:0000766!1.40e-37!76;CL:0000557!2.97e-34!71;CL:0002009!1.22e-33!65;CL:0002194!2.14e-32!63;CL:0000576!2.14e-32!63;CL:0000040!2.14e-32!63;CL:0000559!2.14e-32!63;CL:0000763!1.70e-31!112;CL:0000049!1.70e-31!112;CL:0000839!3.08e-30!70;CL:0002057!7.38e-29!42;CL:0000860!5.58e-26!45;CL:0000738!1.22e-21!140;CL:0000037!1.03e-19!172;CL:0000566!1.03e-19!172;CL:0000988!4.05e-19!182;CL:0002032!3.73e-18!165;CL:0000837!3.73e-18!165;CL:0002087!1.73e-15!119;CL:0002031!3.32e-15!124;CL:0002320!8.88e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.70e-35;33!CL:0002057;3.70e-35;33!CL:0000473;1.04e-33;39!CL:0000234;1.04e-33;39!CL:0000576;1.98e-32;48!CL:0000766;3.41e-27;69!CL:0000763;6.83e-17;100!CL:0000094;1.49e-09;8!CL:0000738;3.66e-09;136!CL:0000081;8.03e-08;11!CL:0002087;9.21e-08;104!CL:0002393;1.44e-07;6!CL:0002397;1.44e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.01e-66,72;CL:0000557,1.55e-60,67;CL:0002009,3.40e-59,61;CL:0000763,3.27e-58,108;CL:0000049,3.27e-58,108;CL:0002194,4.07e-57,59;CL:0000576,4.07e-57,59;CL:0000040,4.07e-57,59;CL:0000559,4.07e-57,59;CL:0000839,7.24e-55,66;CL:0000473,9.76e-52,48;CL:0000234,9.76e-52,48;CL:0000860,1.54e-46,42;CL:0002057,1.54e-46,42;CL:0000738,4.34e-36,136;CL:0000037,5.29e-36,168;CL:0002032,1.61e-33,161;CL:0000837,1.61e-33,161;CL:0000988,1.83e-33,177;CL:0002031,1.44e-26,120;CL:0002087,1.97e-26,115;CL:0000134,3.13e-12,354;CL:0002320,8.26e-12,361;CL:0000094,1.46e-09,8;CL:0002393,2.57e-09,9;CL:0002397,2.57e-09,9;CL:0000219,3.29e-09,386;CL:0000081,7.81e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-33;42!CL:0000049;1.61e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.43e-38!102;UBERON:0003061!5.43e-38!102;UBERON:0002193!4.86e-34!112;UBERON:0002371!2.71e-32!80;UBERON:0001474!3.03e-30!86;UBERON:0004765!3.01e-26!101;UBERON:0001434!3.01e-26!101;UBERON:0002405!4.63e-24!115;UBERON:0007023!2.18e-10!115;UBERON:0000062!6.52e-10!511;UBERON:0002204!9.06e-10!167;UBERON:0000178!2.35e-08!15;UBERON:0000179!2.35e-08!15;UBERON:0000463!2.35e-08!15;UBERON:0003081!5.27e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!5.43e-38!102;UBERON:0003061!5.43e-38!102;UBERON:0002193!4.86e-34!112;UBERON:0002371!2.71e-32!80;UBERON:0001474!3.03e-30!86;UBERON:0004765!3.01e-26!101;UBERON:0001434!3.01e-26!101;UBERON:0002405!4.63e-24!115;UBERON:0007023!2.18e-10!115;UBERON:0000062!6.52e-10!511;UBERON:0002204!9.06e-10!167;UBERON:0000178!2.35e-08!15;UBERON:0000179!2.35e-08!15;UBERON:0000463!2.35e-08!15;UBERON:0003081!5.27e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.46e-10;15!UBERON:0000179;3.46e-10;15!UBERON:0000463;3.46e-10;15!UBERON:0002390;6.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.80e-61,98;UBERON:0003061,3.80e-61,98;UBERON:0002371,2.82e-55,76;UBERON:0002193,1.45e-52,108;UBERON:0001474,6.53e-51,82;UBERON:0004765,5.88e-47,90;UBERON:0002405,1.21e-42,93;UBERON:0001434,1.41e-39,100;UBERON:0003081,1.07e-18,203;UBERON:0002204,4.43e-18,167;UBERON:0002384,1.47e-11,371;UBERON:0000178,3.15e-10,15;UBERON:0000179,3.15e-10,15;UBERON:0000463,3.15e-10,15;UBERON:0000926,2.89e-09,315;UBERON:0004120,2.89e-09,315;UBERON:0006603,2.89e-09,315 | |||
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| ||
|short_description=p3@IL6R | |short_description=p3@IL6R | ||
}} | }} |
Latest revision as of 09:11, 17 September 2015
Short description: | p3@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL6R_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -139bp_to_ENST00000512471_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | D6R9R8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.01e-66 | 72 |
granulocyte monocyte progenitor cell | 1.55e-60 | 67 |
macrophage dendritic cell progenitor | 3.40e-59 | 61 |
myeloid cell | 3.27e-58 | 108 |
common myeloid progenitor | 3.27e-58 | 108 |
monopoietic cell | 4.07e-57 | 59 |
monocyte | 4.07e-57 | 59 |
monoblast | 4.07e-57 | 59 |
promonocyte | 4.07e-57 | 59 |
myeloid lineage restricted progenitor cell | 7.24e-55 | 66 |
defensive cell | 9.76e-52 | 48 |
phagocyte | 9.76e-52 | 48 |
classical monocyte | 1.54e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-46 | 42 |
leukocyte | 4.34e-36 | 136 |
hematopoietic stem cell | 5.29e-36 | 168 |
hematopoietic oligopotent progenitor cell | 1.61e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-33 | 161 |
hematopoietic cell | 1.83e-33 | 177 |
hematopoietic lineage restricted progenitor cell | 1.44e-26 | 120 |
nongranular leukocyte | 1.97e-26 | 115 |
mesenchymal cell | 3.13e-12 | 354 |
connective tissue cell | 8.26e-12 | 361 |
granulocyte | 1.46e-09 | 8 |
intermediate monocyte | 2.57e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.57e-09 | 9 |
motile cell | 3.29e-09 | 386 |
blood cell | 7.81e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.80e-61 | 98 |
blood island | 3.80e-61 | 98 |
bone marrow | 2.82e-55 | 76 |
hemolymphoid system | 1.45e-52 | 108 |
bone element | 6.53e-51 | 82 |
skeletal element | 5.88e-47 | 90 |
immune system | 1.21e-42 | 93 |
skeletal system | 1.41e-39 | 100 |
lateral plate mesoderm | 1.07e-18 | 203 |
musculoskeletal system | 4.43e-18 | 167 |
connective tissue | 1.47e-11 | 371 |
blood | 3.15e-10 | 15 |
haemolymphatic fluid | 3.15e-10 | 15 |
organism substance | 3.15e-10 | 15 |
mesoderm | 2.89e-09 | 315 |
mesoderm-derived structure | 2.89e-09 | 315 |
presumptive mesoderm | 2.89e-09 | 315 |