FFCP PHASE1:Hg19::chr1:154378049..154378096,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9R8 | |UniProt=D6R9R8 | ||
|association_with_transcript=0bp_to_ENST00000512471_5end | |association_with_transcript=0bp_to_ENST00000512471_5end | ||
|cluster_id=chr1:154378049..154378096,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_IL6R_5end | |description=CAGE_peak_2_at_IL6R_5end | ||
|id=chr1:154378049..154378096,+ | |id=chr1:154378049..154378096,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.67e-33!76;CL:0000738!5.39e-30!140;CL:0000557!5.96e-30!71;CL:0002009!2.47e-28!65;CL:0002194!1.98e-27!63;CL:0000576!1.98e-27!63;CL:0000040!1.98e-27!63;CL:0000559!1.98e-27!63;CL:0000763!2.79e-27!112;CL:0000049!2.79e-27!112;CL:0000988!9.01e-27!182;CL:0000839!1.26e-26!70;CL:0000037!3.28e-26!172;CL:0000566!3.28e-26!172;CL:0002057!3.49e-25!42;CL:0002032!1.68e-24!165;CL:0000837!1.68e-24!165;CL:0000860!1.35e-22!45;CL:0002087!1.85e-22!119;CL:0002031!8.69e-22!124 | |ontology_enrichment_celltype=CL:0000766!2.67e-33!76;CL:0000738!5.39e-30!140;CL:0000557!5.96e-30!71;CL:0002009!2.47e-28!65;CL:0002194!1.98e-27!63;CL:0000576!1.98e-27!63;CL:0000040!1.98e-27!63;CL:0000559!1.98e-27!63;CL:0000763!2.79e-27!112;CL:0000049!2.79e-27!112;CL:0000988!9.01e-27!182;CL:0000839!1.26e-26!70;CL:0000037!3.28e-26!172;CL:0000566!3.28e-26!172;CL:0002057!3.49e-25!42;CL:0002032!1.68e-24!165;CL:0000837!1.68e-24!165;CL:0000860!1.35e-22!45;CL:0002087!1.85e-22!119;CL:0002031!8.69e-22!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.30e-24;33!CL:0002057;3.30e-24;33!CL:0000473;2.85e-23;39!CL:0000234;2.85e-23;39!CL:0000576;1.11e-20;48!CL:0000766;3.28e-17;69!CL:0000763;1.67e-10;100!CL:0002087;1.22e-08;104!CL:0000738;4.33e-08;136!CL:0000094;8.22e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.17e-42,72;CL:0000738,3.50e-38,136;CL:0000557,5.91e-38,67;CL:0002009,8.44e-37,61;CL:0000988,3.41e-36,177;CL:0000763,4.81e-36,108;CL:0000049,4.81e-36,108;CL:0002194,9.40e-36,59;CL:0000576,9.40e-36,59;CL:0000040,9.40e-36,59;CL:0000559,9.40e-36,59;CL:0000037,4.13e-35,168;CL:0000839,3.95e-34,66;CL:0002032,8.39e-33,161;CL:0000837,8.39e-33,161;CL:0000473,2.66e-32,48;CL:0000234,2.66e-32,48;CL:0002087,2.63e-29,115;CL:0000860,1.13e-28,42;CL:0002057,1.13e-28,42;CL:0002031,3.47e-28,120;CL:0000094,8.62e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.21e-21;42!CL:0000049;2.66e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.15e-36!102;UBERON:0003061!3.15e-36!102;UBERON:0002193!1.65e-32!112;UBERON:0002371!5.27e-28!80;UBERON:0001474!2.54e-25!86;UBERON:0002405!1.93e-23!115;UBERON:0004765!2.93e-20!101;UBERON:0001434!2.93e-20!101;UBERON:0007023!1.41e-13!115;UBERON:0000178!4.72e-09!15;UBERON:0000179!4.72e-09!15;UBERON:0000463!4.72e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.74e-10;15!UBERON:0000179;2.74e-10;15!UBERON:0000463;2.74e-10;15!UBERON:0002390;7.47e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.38e-44,98;UBERON:0003061,8.38e-44,98;UBERON:0002193,6.55e-39,108;UBERON:0002371,6.19e-34,76;UBERON:0001474,4.62e-30,82;UBERON:0004765,5.29e-30,90;UBERON:0002405,9.25e-30,93;UBERON:0001434,2.43e-23,100;UBERON:0007023,6.39e-13,114;UBERON:0000178,3.11e-10,15;UBERON:0000179,3.11e-10,15;UBERON:0000463,3.11e-10,15;UBERON:0003081,1.13e-09,203 | |||
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| ||
|short_description=p2@IL6R | |short_description=p2@IL6R | ||
}} | }} |
Latest revision as of 09:11, 17 September 2015
Short description: | p2@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL6R_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000512471_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | D6R9R8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.17e-42 | 72 |
leukocyte | 3.50e-38 | 136 |
granulocyte monocyte progenitor cell | 5.91e-38 | 67 |
macrophage dendritic cell progenitor | 8.44e-37 | 61 |
hematopoietic cell | 3.41e-36 | 177 |
myeloid cell | 4.81e-36 | 108 |
common myeloid progenitor | 4.81e-36 | 108 |
monopoietic cell | 9.40e-36 | 59 |
monocyte | 9.40e-36 | 59 |
monoblast | 9.40e-36 | 59 |
promonocyte | 9.40e-36 | 59 |
hematopoietic stem cell | 4.13e-35 | 168 |
myeloid lineage restricted progenitor cell | 3.95e-34 | 66 |
hematopoietic oligopotent progenitor cell | 8.39e-33 | 161 |
hematopoietic multipotent progenitor cell | 8.39e-33 | 161 |
defensive cell | 2.66e-32 | 48 |
phagocyte | 2.66e-32 | 48 |
nongranular leukocyte | 2.63e-29 | 115 |
classical monocyte | 1.13e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-28 | 42 |
hematopoietic lineage restricted progenitor cell | 3.47e-28 | 120 |
granulocyte | 8.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.38e-44 | 98 |
blood island | 8.38e-44 | 98 |
hemolymphoid system | 6.55e-39 | 108 |
bone marrow | 6.19e-34 | 76 |
bone element | 4.62e-30 | 82 |
skeletal element | 5.29e-30 | 90 |
immune system | 9.25e-30 | 93 |
skeletal system | 2.43e-23 | 100 |
adult organism | 6.39e-13 | 114 |
blood | 3.11e-10 | 15 |
haemolymphatic fluid | 3.11e-10 | 15 |
organism substance | 3.11e-10 | 15 |
lateral plate mesoderm | 1.13e-09 | 203 |