FFCP PHASE1:Hg19::chr12:132379210..132379234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8408 | |EntrezGene=8408 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12558 | |HGNC=12558 | ||
|TSSclassifier=strong | |||
|UniProt=O75385 | |UniProt=O75385 | ||
|association_with_transcript=14bp_to_ENST00000321867_5end | |association_with_transcript=14bp_to_ENST00000321867_5end | ||
|cluster_id=chr12:132379210..132379234,+ | |||
|coexpression_cluster_id=C3258 | |||
|description=CAGE_peak_2_at_ULK1_5end | |description=CAGE_peak_2_at_ULK1_5end | ||
|id=chr12:132379210..132379234,+ | |id=chr12:132379210..132379234,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.06e-19!45;CL:0002057!2.48e-18!42;CL:0000766!1.05e-09!76;CL:0002009!4.20e-08!65;CL:0002194!5.06e-08!63;CL:0000576!5.06e-08!63;CL:0000040!5.06e-08!63;CL:0000559!5.06e-08!63;CL:0000557!8.48e-07!71;CL:0000839!9.25e-07!70 | |ontology_enrichment_celltype=CL:0000860!4.06e-19!45;CL:0002057!2.48e-18!42;CL:0000766!1.05e-09!76;CL:0002009!4.20e-08!65;CL:0002194!5.06e-08!63;CL:0000576!5.06e-08!63;CL:0000040!5.06e-08!63;CL:0000559!5.06e-08!63;CL:0000557!8.48e-07!71;CL:0000839!9.25e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-13;33!CL:0002057;1.72e-13;33!CL:0000576;4.93e-09;48!CL:0000473;7.49e-07;39!CL:0000234;7.49e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.37e-18,42;CL:0002057,2.37e-18,42;CL:0000473,5.30e-12,48;CL:0000234,5.30e-12,48;CL:0000766,3.22e-09,72;CL:0002009,1.27e-07,61;CL:0002194,1.53e-07,59;CL:0000576,1.53e-07,59;CL:0000040,1.53e-07,59;CL:0000559,1.53e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.36e-18!115;UBERON:0000468!3.79e-09!659;UBERON:0003080!8.98e-09!42;UBERON:0002780!1.18e-08!41;UBERON:0001890!1.18e-08!41;UBERON:0006240!1.18e-08!41;UBERON:0001049!1.26e-08!57;UBERON:0005068!1.26e-08!57;UBERON:0006241!1.26e-08!57;UBERON:0007135!1.26e-08!57;UBERON:0001017!1.49e-08!82;UBERON:0005743!3.40e-08!86;UBERON:0002616!6.01e-08!59;UBERON:0000955!8.04e-08!69;UBERON:0006238!8.04e-08!69;UBERON:0003075!7.64e-07!86;UBERON:0007284!7.64e-07!86;UBERON:0002346!8.91e-07!90;UBERON:0001893!9.05e-07!34;UBERON:0002791!9.74e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.26e-17,114;UBERON:0000073,6.85e-09,53;UBERON:0002616,6.85e-09,53;UBERON:0002780,1.16e-08,41;UBERON:0001890,1.16e-08,41;UBERON:0003080,1.16e-08,41;UBERON:0006240,1.16e-08,41;UBERON:0001049,1.65e-08,56;UBERON:0005068,1.65e-08,56;UBERON:0006241,1.65e-08,56;UBERON:0007135,1.65e-08,56;UBERON:0001017,1.86e-08,81;UBERON:0000955,1.00e-07,68;UBERON:0006238,1.00e-07,68;UBERON:0001893,8.92e-07,34;UBERON:0002791,9.26e-07,32 | |||
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| ||
|short_description=p2@ULK1 | |short_description=p2@ULK1 | ||
}} | }} |
Latest revision as of 09:39, 17 September 2015
Short description: | p2@ULK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ULK1_5end |
Coexpression cluster: | C3258_Neutrophils_Eosinophils_caudate_putamen_breast_oral_CD14 |
Association with transcript: | 14bp_to_ENST00000321867_5end |
EntrezGene: | ULK1 |
HGNC: | 12558 |
UniProt: | O75385 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.37e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.37e-18 | 42 |
defensive cell | 5.30e-12 | 48 |
phagocyte | 5.30e-12 | 48 |
myeloid leukocyte | 3.22e-09 | 72 |
macrophage dendritic cell progenitor | 1.27e-07 | 61 |
monopoietic cell | 1.53e-07 | 59 |
monocyte | 1.53e-07 | 59 |
monoblast | 1.53e-07 | 59 |
promonocyte | 1.53e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.26e-17 | 114 |
regional part of nervous system | 6.85e-09 | 53 |
regional part of brain | 6.85e-09 | 53 |
regional part of forebrain | 1.16e-08 | 41 |
forebrain | 1.16e-08 | 41 |
anterior neural tube | 1.16e-08 | 41 |
future forebrain | 1.16e-08 | 41 |
neural tube | 1.65e-08 | 56 |
neural rod | 1.65e-08 | 56 |
future spinal cord | 1.65e-08 | 56 |
neural keel | 1.65e-08 | 56 |
central nervous system | 1.86e-08 | 81 |
brain | 1.00e-07 | 68 |
future brain | 1.00e-07 | 68 |
telencephalon | 8.92e-07 | 34 |
regional part of telencephalon | 9.26e-07 | 32 |