FFCP PHASE1:Hg19::chr6:26383318..26383376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10385 | |EntrezGene=10385 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1137 | |HGNC=1137 | ||
|TSSclassifier=strong | |||
|UniProt=A6NM84,Q8WVV5,B4DQ01,C9JWH2,E9PH07,C9J8R3,C9IZY2,C9IY66,B4DE97 | |UniProt=A6NM84,Q8WVV5,B4DQ01,C9JWH2,E9PH07,C9J8R3,C9IZY2,C9IY66,B4DE97 | ||
|association_with_transcript=0bp_to_ENST00000352867,ENST00000356709,ENST00000432533,ENST00000467485,ENST00000469230,ENST00000472507,ENST00000482536,ENST00000482636,ENST00000482842,ENST00000490025,ENST00000493275,NM_001197238,NM_001197239,NM_001197240,NM_006995,NM_181531,uc003nhq.2,uc003nhr.2,uc011dkf.1,uc011dkg.1,uc011dkh.1_5end | |association_with_transcript=0bp_to_ENST00000352867,ENST00000356709,ENST00000432533,ENST00000467485,ENST00000469230,ENST00000472507,ENST00000482536,ENST00000482636,ENST00000482842,ENST00000490025,ENST00000493275,NM_001197238,NM_001197239,NM_001197240,NM_006995,NM_181531,uc003nhq.2,uc003nhr.2,uc011dkf.1,uc011dkg.1,uc011dkh.1_5end | ||
|cluster_id=chr6:26383318..26383376,+ | |||
|description=CAGE_peak_1_at_BTN2A2_5end | |description=CAGE_peak_1_at_BTN2A2_5end | ||
|id=chr6:26383318..26383376,+ | |id=chr6:26383318..26383376,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.28e-25!140;CL:0000988!2.02e-18!182;CL:0002031!3.77e-18!124;CL:0002087!1.82e-16!119;CL:0000037!2.29e-16!172;CL:0000566!2.29e-16!172;CL:0002032!4.41e-16!165;CL:0000837!4.41e-16!165;CL:0000766!7.76e-14!76;CL:0000557!3.94e-12!71;CL:0000839!1.35e-09!70;CL:0002009!1.65e-09!65;CL:0000945!2.51e-09!24;CL:0000826!2.51e-09!24;CL:0002057!6.03e-09!42;CL:0000236!6.88e-09!14;CL:0002194!1.14e-08!63;CL:0000576!1.14e-08!63;CL:0000040!1.14e-08!63;CL:0000559!1.14e-08!63;CL:0000763!1.81e-08!112;CL:0000049!1.81e-08!112;CL:0000542!2.05e-08!53;CL:0000051!2.05e-08!53;CL:0000838!2.92e-08!52;CL:0000451!2.40e-07!10;CL:0000860!8.38e-07!45;CL:0000990!8.76e-07!8 | |ontology_enrichment_celltype=CL:0000738!3.28e-25!140;CL:0000988!2.02e-18!182;CL:0002031!3.77e-18!124;CL:0002087!1.82e-16!119;CL:0000037!2.29e-16!172;CL:0000566!2.29e-16!172;CL:0002032!4.41e-16!165;CL:0000837!4.41e-16!165;CL:0000766!7.76e-14!76;CL:0000557!3.94e-12!71;CL:0000839!1.35e-09!70;CL:0002009!1.65e-09!65;CL:0000945!2.51e-09!24;CL:0000826!2.51e-09!24;CL:0002057!6.03e-09!42;CL:0000236!6.88e-09!14;CL:0002194!1.14e-08!63;CL:0000576!1.14e-08!63;CL:0000040!1.14e-08!63;CL:0000559!1.14e-08!63;CL:0000763!1.81e-08!112;CL:0000049!1.81e-08!112;CL:0000542!2.05e-08!53;CL:0000051!2.05e-08!53;CL:0000838!2.92e-08!52;CL:0000451!2.40e-07!10;CL:0000860!8.38e-07!45;CL:0000990!8.76e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.26e-09;24!CL:0000236;1.89e-08;13!CL:0000451;2.29e-07;10!CL:0000738;3.04e-07;136!CL:0000473;4.36e-07;39!CL:0000234;4.36e-07;39!CL:0000766;8.11e-07;69!CL:0000990;8.15e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.41e-28,136;CL:0000988,6.61e-21,177;CL:0002031,8.90e-21,120;CL:0002087,5.56e-19,115;CL:0000037,2.01e-18,168;CL:0002032,3.67e-18,161;CL:0000837,3.67e-18,161;CL:0000766,8.30e-17,72;CL:0000557,5.59e-15,67;CL:0002009,4.49e-12,61;CL:0000839,4.50e-12,66;CL:0002194,3.95e-11,59;CL:0000576,3.95e-11,59;CL:0000040,3.95e-11,59;CL:0000559,3.95e-11,59;CL:0000473,2.60e-10,48;CL:0000234,2.60e-10,48;CL:0000763,3.39e-10,108;CL:0000049,3.39e-10,108;CL:0000945,2.48e-09,24;CL:0000826,2.48e-09,24;CL:0000860,5.97e-09,42;CL:0002057,5.97e-09,42;CL:0000236,6.81e-09,14;CL:0000542,2.03e-08,53;CL:0000051,2.03e-08,53;CL:0000838,2.89e-08,52;CL:0000451,2.38e-07,10;CL:0000990,8.70e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.37e-17!112;UBERON:0002390!2.33e-16!102;UBERON:0003061!2.33e-16!102;UBERON:0002371!3.61e-10!80;UBERON:0001474!5.20e-09!86;UBERON:0004765!9.01e-08!101;UBERON:0001434!9.01e-08!101;UBERON:0002405!1.07e-07!115 | |ontology_enrichment_uberon=UBERON:0002193!3.37e-17!112;UBERON:0002390!2.33e-16!102;UBERON:0003061!2.33e-16!102;UBERON:0002371!3.61e-10!80;UBERON:0001474!5.20e-09!86;UBERON:0004765!9.01e-08!101;UBERON:0001434!9.01e-08!101;UBERON:0002405!1.07e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.39e-20,108;UBERON:0002390,3.77e-19,98;UBERON:0003061,3.77e-19,98;UBERON:0002405,6.54e-15,93;UBERON:0002371,1.48e-12,76;UBERON:0001474,4.18e-11,82;UBERON:0004765,2.02e-10,90;UBERON:0001434,1.69e-09,100 | |||
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| ||
|short_description=p1@BTN2A2 | |short_description=p1@BTN2A2 | ||
}} | }} |
Latest revision as of 09:47, 17 September 2015
Short description: | p1@BTN2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BTN2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000352867, ENST00000356709, ENST00000432533, ENST00000467485, ENST00000469230, ENST00000472507, ENST00000482536, ENST00000482636, ENST00000482842, ENST00000490025, ENST00000493275, NM_001197238, NM_001197239, NM_001197240, NM_006995, NM_181531, uc003nhq.2, uc003nhr.2, uc011dkf.1, uc011dkg.1, uc011dkh.1_5end |
EntrezGene: | BTN2A2 |
HGNC: | 1137 |
UniProt: | A6NM84Q8WVV5B4DQ01C9JWH2E9PH07C9J8R3C9IZY2C9IY66B4DE97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.41e-28 | 136 |
hematopoietic cell | 6.61e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 8.90e-21 | 120 |
nongranular leukocyte | 5.56e-19 | 115 |
hematopoietic stem cell | 2.01e-18 | 168 |
hematopoietic oligopotent progenitor cell | 3.67e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.67e-18 | 161 |
myeloid leukocyte | 8.30e-17 | 72 |
granulocyte monocyte progenitor cell | 5.59e-15 | 67 |
macrophage dendritic cell progenitor | 4.49e-12 | 61 |
myeloid lineage restricted progenitor cell | 4.50e-12 | 66 |
monopoietic cell | 3.95e-11 | 59 |
monocyte | 3.95e-11 | 59 |
monoblast | 3.95e-11 | 59 |
promonocyte | 3.95e-11 | 59 |
defensive cell | 2.60e-10 | 48 |
phagocyte | 2.60e-10 | 48 |
myeloid cell | 3.39e-10 | 108 |
common myeloid progenitor | 3.39e-10 | 108 |
lymphocyte of B lineage | 2.48e-09 | 24 |
pro-B cell | 2.48e-09 | 24 |
classical monocyte | 5.97e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.97e-09 | 42 |
B cell | 6.81e-09 | 14 |
lymphocyte | 2.03e-08 | 53 |
common lymphoid progenitor | 2.03e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.89e-08 | 52 |
dendritic cell | 2.38e-07 | 10 |
conventional dendritic cell | 8.70e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.39e-20 | 108 |
hematopoietic system | 3.77e-19 | 98 |
blood island | 3.77e-19 | 98 |
immune system | 6.54e-15 | 93 |
bone marrow | 1.48e-12 | 76 |
bone element | 4.18e-11 | 82 |
skeletal element | 2.02e-10 | 90 |
skeletal system | 1.69e-09 | 100 |