FFCP PHASE1:Hg19::chr8:22020164..22020173,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6440 | |EntrezGene=6440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10802 | |HGNC=10802 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-418bp_to_ENST00000522630_5end | |association_with_transcript=-418bp_to_ENST00000522630_5end | ||
|cluster_id=chr8:22020164..22020173,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_10_at_SFTPC_5end | |description=CAGE_peak_10_at_SFTPC_5end | ||
|id=chr8:22020164..22020173,+ | |id=chr8:22020164..22020173,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-21;29!UBERON:0001041;8.88e-21;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!7.48e-30!1;UBERON:0006518!7.48e-30!1;UBERON:0008949!7.48e-30!1;UBERON:0000101!7.48e-30!1;UBERON:0002167!7.48e-30!1;UBERON:0002048!2.09e-12!22;UBERON:0000117!2.09e-12!22;UBERON:0000171!2.09e-12!22;UBERON:0000170!2.09e-12!22;UBERON:0005597!2.09e-12!22;UBERON:0000118!2.09e-12!22;UBERON:0005178!2.86e-08!34;UBERON:0002224!2.86e-08!34;UBERON:0005181!4.72e-08!35;UBERON:0005153!1.19e-07!37;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38 | |ontology_enrichment_uberon=UBERON:0002171!7.48e-30!1;UBERON:0006518!7.48e-30!1;UBERON:0008949!7.48e-30!1;UBERON:0000101!7.48e-30!1;UBERON:0002167!7.48e-30!1;UBERON:0002048!2.09e-12!22;UBERON:0000117!2.09e-12!22;UBERON:0000171!2.09e-12!22;UBERON:0000170!2.09e-12!22;UBERON:0005597!2.09e-12!22;UBERON:0000118!2.09e-12!22;UBERON:0005178!2.86e-08!34;UBERON:0002224!2.86e-08!34;UBERON:0005181!4.72e-08!35;UBERON:0005153!1.19e-07!37;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.23e-66;1!UBERON:0006518;1.23e-66;1!UBERON:0008949;1.23e-66;1!UBERON:0000101;1.23e-66;1!UBERON:0002167;1.23e-66;1!UBERON:0002048;7.08e-28;22!UBERON:0000117;7.08e-28;22!UBERON:0000171;7.08e-28;22!UBERON:0000170;7.08e-28;22!UBERON:0005178;1.93e-16;34!UBERON:0002224;1.93e-16;34!UBERON:0000065;3.44e-13;44!UBERON:0005181;5.65e-13;35!UBERON:0000915;6.72e-10;52!UBERON:0001004;7.41e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.23e-66,1;UBERON:0006518,1.23e-66,1;UBERON:0008949,1.23e-66,1;UBERON:0000101,1.23e-66,1;UBERON:0002167,1.23e-66,1;UBERON:0002048,7.08e-28,22;UBERON:0000117,7.08e-28,22;UBERON:0000171,7.08e-28,22;UBERON:0000170,7.08e-28,22;UBERON:0005597,7.08e-28,22;UBERON:0000118,7.08e-28,22;UBERON:0005178,1.78e-18,34;UBERON:0002224,1.78e-18,34;UBERON:0005181,5.55e-18,35;UBERON:0005153,4.49e-17,37;UBERON:0008947,1.18e-16,38;UBERON:0003258,1.18e-16,38;UBERON:0005157,1.10e-13,47;UBERON:0000915,1.77e-12,52;UBERON:0000065,4.68e-12,54;UBERON:0001004,4.40e-09,74;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
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|short_description=p10@SFTPC | |short_description=p10@SFTPC | ||
}} | }} |
Latest revision as of 10:25, 17 September 2015
Short description: | p10@SFTPC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SFTPC_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -418bp_to_ENST00000522630_5end |
EntrezGene: | SFTPC |
HGNC: | 10802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.23e-66 | 1 |
right lung lobe | 1.23e-66 | 1 |
lower lobe of lung | 1.23e-66 | 1 |
lobe of lung | 1.23e-66 | 1 |
right lung | 1.23e-66 | 1 |
lung | 7.08e-28 | 22 |
respiratory tube | 7.08e-28 | 22 |
respiration organ | 7.08e-28 | 22 |
pair of lungs | 7.08e-28 | 22 |
lung primordium | 7.08e-28 | 22 |
lung bud | 7.08e-28 | 22 |
thoracic cavity element | 1.78e-18 | 34 |
thoracic cavity | 1.78e-18 | 34 |
thoracic segment organ | 5.55e-18 | 35 |
epithelial bud | 4.49e-17 | 37 |
respiratory primordium | 1.18e-16 | 38 |
endoderm of foregut | 1.18e-16 | 38 |
epithelial fold | 1.10e-13 | 47 |
thoracic segment of trunk | 1.77e-12 | 52 |
respiratory tract | 4.68e-12 | 54 |
respiratory system | 4.40e-09 | 74 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |