FFCP PHASE1:Hg19::chr3:191047220..191047257,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |EntrezGene=152137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18111 | |HGNC=18111 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVM0 | |UniProt=Q8IVM0 | ||
|association_with_transcript=346bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | |association_with_transcript=346bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | ||
|cluster_id=chr3:191047220..191047257,+ | |||
|description=CAGE_peak_2_at_CCDC50_5end | |description=CAGE_peak_2_at_CCDC50_5end | ||
|id=chr3:191047220..191047257,+ | |id=chr3:191047220..191047257,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.83e-16!24;CL:0000222!4.24e-16!119;CL:0000115!1.23e-12!35;CL:0000071!1.31e-12!18;CL:0002546!1.31e-12!18;CL:0000220!8.73e-11!246;CL:0002078!8.95e-11!44;CL:0002321!2.26e-10!248;CL:0000213!4.61e-10!57;CL:0000215!4.61e-10!57;CL:0000359!1.06e-07!32;CL:0000192!1.68e-07!42;CL:0000514!1.68e-07!42;CL:1000413!3.40e-07!9;CL:0000680!5.47e-07!57;CL:0000056!5.47e-07!57;CL:0000355!5.47e-07!57 | |ontology_enrichment_celltype=CL:0002139!3.83e-16!24;CL:0000222!4.24e-16!119;CL:0000115!1.23e-12!35;CL:0000071!1.31e-12!18;CL:0002546!1.31e-12!18;CL:0000220!8.73e-11!246;CL:0002078!8.95e-11!44;CL:0002321!2.26e-10!248;CL:0000213!4.61e-10!57;CL:0000215!4.61e-10!57;CL:0000359!1.06e-07!32;CL:0000192!1.68e-07!42;CL:0000514!1.68e-07!42;CL:1000413!3.40e-07!9;CL:0000680!5.47e-07!57;CL:0000056!5.47e-07!57;CL:0000355!5.47e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.47e-16;24!CL:0000071;9.48e-13;18!CL:0000115;2.03e-11;36!CL:0002078;1.69e-07;45!CL:0000359;2.89e-07;32!CL:1000413;2.92e-07;9!CL:0000213;7.86e-07;58!CL:0000215;7.86e-07;58 | |ontology_enrichment_celltype_v019=CL:0002139;2.47e-16;24!CL:0000071;9.48e-13;18!CL:0000115;2.03e-11;36!CL:0002078;1.69e-07;45!CL:0000359;2.89e-07;32!CL:1000413;2.92e-07;9!CL:0000213;7.86e-07;58!CL:0000215;7.86e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.52e-16,24;CL:0000222,3.77e-16,121;CL:0000115,4.57e-13,36;CL:0000071,1.23e-12,18;CL:0002546,1.23e-12,18;CL:0002078,4.37e-11,45;CL:0000213,2.33e-10,58;CL:0000215,2.33e-10,58;CL:0002321,2.35e-10,250;CL:0000359,1.02e-07,32;CL:0000192,3.13e-07,43;CL:0000514,3.13e-07,43;CL:1000413,3.30e-07,9;CL:0000680,8.97e-07,58;CL:0000056,8.97e-07,58;CL:0000355,8.97e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;9.48e-13;18 | |ontology_enrichment_development_v019=CL:0002546;9.48e-13;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.80e-22!118;UBERON:0000055!5.85e-22!69;UBERON:0004111!2.25e-21!241;UBERON:0002049!2.94e-20!79;UBERON:0007798!2.94e-20!79;UBERON:0001981!1.42e-19!60;UBERON:0007500!1.42e-19!60;UBERON:0004537!1.42e-19!60;UBERON:0006965!1.42e-19!60;UBERON:0000119!1.71e-19!312;UBERON:0000483!2.07e-19!309;UBERON:0000025!6.29e-19!194;UBERON:0000477!6.89e-19!286;UBERON:0004872!8.55e-19!84;UBERON:0000490!2.96e-17!138;UBERON:0001009!9.42e-17!113;UBERON:0004535!1.42e-16!110;UBERON:0005256!2.65e-13!143;UBERON:0001986!1.31e-12!18;UBERON:0004638!1.31e-12!18;UBERON:0004852!1.31e-12!18;UBERON:0001637!1.79e-12!42;UBERON:0003509!1.79e-12!42;UBERON:0004572!1.79e-12!42;UBERON:0002100!8.44e-11!216;UBERON:0000487!2.15e-10!22;UBERON:0000481!4.89e-10!347;UBERON:0003104!7.06e-09!238;UBERON:0009142!7.06e-09!238;UBERON:0004573!1.35e-08!33;UBERON:0004571!1.35e-08!33;UBERON:0000475!1.54e-08!365;UBERON:0006914!6.55e-08!25;UBERON:0003915!3.40e-07!9;UBERON:0004700!3.40e-07!9;UBERON:0001917!3.40e-07!9;UBERON:0000947!4.52e-07!21;UBERON:0010191!4.52e-07!21;UBERON:0000480!5.09e-07!626;UBERON:0005172!5.15e-07!55;UBERON:0005173!5.15e-07!55;UBERON:0002417!6.16e-07!61;UBERON:0000916!6.16e-07!61;UBERON:0002385!6.65e-07!63;UBERON:0001015!6.65e-07!63;UBERON:0000383!6.65e-07!63;UBERON:0001134!8.58e-07!61;UBERON:0002036!8.58e-07!61;UBERON:0003082!8.58e-07!61;UBERON:0000467!8.66e-07!625 | |ontology_enrichment_uberon=UBERON:0003914!1.80e-22!118;UBERON:0000055!5.85e-22!69;UBERON:0004111!2.25e-21!241;UBERON:0002049!2.94e-20!79;UBERON:0007798!2.94e-20!79;UBERON:0001981!1.42e-19!60;UBERON:0007500!1.42e-19!60;UBERON:0004537!1.42e-19!60;UBERON:0006965!1.42e-19!60;UBERON:0000119!1.71e-19!312;UBERON:0000483!2.07e-19!309;UBERON:0000025!6.29e-19!194;UBERON:0000477!6.89e-19!286;UBERON:0004872!8.55e-19!84;UBERON:0000490!2.96e-17!138;UBERON:0001009!9.42e-17!113;UBERON:0004535!1.42e-16!110;UBERON:0005256!2.65e-13!143;UBERON:0001986!1.31e-12!18;UBERON:0004638!1.31e-12!18;UBERON:0004852!1.31e-12!18;UBERON:0001637!1.79e-12!42;UBERON:0003509!1.79e-12!42;UBERON:0004572!1.79e-12!42;UBERON:0002100!8.44e-11!216;UBERON:0000487!2.15e-10!22;UBERON:0000481!4.89e-10!347;UBERON:0003104!7.06e-09!238;UBERON:0009142!7.06e-09!238;UBERON:0004573!1.35e-08!33;UBERON:0004571!1.35e-08!33;UBERON:0000475!1.54e-08!365;UBERON:0006914!6.55e-08!25;UBERON:0003915!3.40e-07!9;UBERON:0004700!3.40e-07!9;UBERON:0001917!3.40e-07!9;UBERON:0000947!4.52e-07!21;UBERON:0010191!4.52e-07!21;UBERON:0000480!5.09e-07!626;UBERON:0005172!5.15e-07!55;UBERON:0005173!5.15e-07!55;UBERON:0002417!6.16e-07!61;UBERON:0000916!6.16e-07!61;UBERON:0002385!6.65e-07!63;UBERON:0001015!6.65e-07!63;UBERON:0000383!6.65e-07!63;UBERON:0001134!8.58e-07!61;UBERON:0002036!8.58e-07!61;UBERON:0003082!8.58e-07!61;UBERON:0000467!8.66e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.48e-13;18!UBERON:0001986;9.48e-13;18!UBERON:0004852;9.48e-13;18!UBERON:0000055;8.70e-11;65!UBERON:0007500;9.62e-11;56!UBERON:0001981;9.62e-11;56!UBERON:0004537;9.62e-11;56!UBERON:0000487;1.47e-10;22!UBERON:0001637;1.01e-09;42!UBERON:0003509;1.01e-09;42!UBERON:0004572;1.01e-09;42!UBERON:0002049;5.55e-09;75!UBERON:0007798;5.55e-09;75!UBERON:0003914;6.60e-09;74!UBERON:0004573;4.14e-08;33!UBERON:0004571;4.14e-08;33!UBERON:0006914;5.36e-08;25!UBERON:0003915;2.92e-07;9!UBERON:0004700;2.92e-07;9!UBERON:0001917;2.92e-07;9!UBERON:0000947;5.24e-07;21!UBERON:0010191;5.24e-07;21!UBERON:0000490;8.40e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004638;9.48e-13;18!UBERON:0001986;9.48e-13;18!UBERON:0004852;9.48e-13;18!UBERON:0000055;8.70e-11;65!UBERON:0007500;9.62e-11;56!UBERON:0001981;9.62e-11;56!UBERON:0004537;9.62e-11;56!UBERON:0000487;1.47e-10;22!UBERON:0001637;1.01e-09;42!UBERON:0003509;1.01e-09;42!UBERON:0004572;1.01e-09;42!UBERON:0002049;5.55e-09;75!UBERON:0007798;5.55e-09;75!UBERON:0003914;6.60e-09;74!UBERON:0004573;4.14e-08;33!UBERON:0004571;4.14e-08;33!UBERON:0006914;5.36e-08;25!UBERON:0003915;2.92e-07;9!UBERON:0004700;2.92e-07;9!UBERON:0001917;2.92e-07;9!UBERON:0000947;5.24e-07;21!UBERON:0010191;5.24e-07;21!UBERON:0000490;8.40e-07;33 | ||
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| ||
|short_description=p2@CCDC50 | |short_description=p2@CCDC50 | ||
}} | }} |
Latest revision as of 10:31, 17 September 2015
Short description: | p2@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC50_5end |
Coexpression cluster: | NA |
Association with transcript: | 346bp_to_ENST00000392456, NM_174908, NM_178335, uc003fsv.2, uc003fsw.2_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | Q8IVM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.52e-16 | 24 |
mesodermal cell | 3.77e-16 | 121 |
endothelial cell | 4.57e-13 | 36 |
blood vessel endothelial cell | 1.23e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.23e-12 | 18 |
meso-epithelial cell | 4.37e-11 | 45 |
lining cell | 2.33e-10 | 58 |
barrier cell | 2.33e-10 | 58 |
embryonic cell | 2.35e-10 | 250 |
vascular associated smooth muscle cell | 1.02e-07 | 32 |
smooth muscle cell | 3.13e-07 | 43 |
smooth muscle myoblast | 3.13e-07 | 43 |
endothelial cell of artery | 3.30e-07 | 9 |
muscle precursor cell | 8.97e-07 | 58 |
myoblast | 8.97e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.97e-07 | 58 |