FFCP PHASE1:Hg19::chr1:154946825..154946891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6464 | |EntrezGene=6464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10840 | |HGNC=10840 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T181,E9PFM5 | |UniProt=Q5T181,E9PFM5 | ||
|association_with_transcript=0bp_to_ENST00000366442,ENST00000368441,ENST00000368450,ENST00000368453_5end | |association_with_transcript=0bp_to_ENST00000366442,ENST00000368441,ENST00000368450,ENST00000368453_5end | ||
|cluster_id=chr1:154946825..154946891,- | |||
|description=CAGE_peak_2_at_SHC1_5end | |description=CAGE_peak_2_at_SHC1_5end | ||
|id=chr1:154946825..154946891,- | |id=chr1:154946825..154946891,- | ||
|ontology_enrichment_celltype=CL:0000766!1.30e-20!76;CL:0000839!6.11e-17!70;CL:0000557!1.88e-16!71;CL:0000063!3.23e-16!578;CL:0002194!9.33e-15!63;CL:0000576!9.33e-15!63;CL:0000040!9.33e-15!63;CL:0000559!9.33e-15!63;CL:0002009!1.85e-14!65;CL:0000548!3.03e-13!679;CL:0000004!3.03e-13!679;CL:0000255!3.03e-13!679;CL:0000860!4.08e-13!45;CL:0000012!4.29e-13!682;CL:0002057!1.31e-12!42;CL:0000763!1.90e-11!112;CL:0000049!1.90e-11!112;CL:0000738!2.61e-10!140;CL:0000003!1.97e-09!722;CL:0000066!3.93e-09!254;CL:0002371!4.67e-09!591;CL:0000144!2.04e-08!625;CL:0002031!7.22e-08!124;CL:0002087!5.42e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.30e-20!76;CL:0000839!6.11e-17!70;CL:0000557!1.88e-16!71;CL:0000063!3.23e-16!578;CL:0002194!9.33e-15!63;CL:0000576!9.33e-15!63;CL:0000040!9.33e-15!63;CL:0000559!9.33e-15!63;CL:0002009!1.85e-14!65;CL:0000548!3.03e-13!679;CL:0000004!3.03e-13!679;CL:0000255!3.03e-13!679;CL:0000860!4.08e-13!45;CL:0000012!4.29e-13!682;CL:0002057!1.31e-12!42;CL:0000763!1.90e-11!112;CL:0000049!1.90e-11!112;CL:0000738!2.61e-10!140;CL:0000003!1.97e-09!722;CL:0000066!3.93e-09!254;CL:0002371!4.67e-09!591;CL:0000144!2.04e-08!625;CL:0002031!7.22e-08!124;CL:0002087!5.42e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.68e-13;33!CL:0002057;5.68e-13;33!CL:0000473;2.42e-11;39!CL:0000234;2.42e-11;39!CL:0000576;2.70e-09;48!CL:0000766;7.59e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.44e-21,72;CL:0000839,4.54e-17,66;CL:0000557,1.48e-16,67;CL:0002194,7.11e-15,59;CL:0000576,7.11e-15,59;CL:0000040,7.11e-15,59;CL:0000559,7.11e-15,59;CL:0002009,1.50e-14,61;CL:0000473,4.84e-13,48;CL:0000234,4.84e-13,48;CL:0000860,1.31e-12,42;CL:0002057,1.31e-12,42;CL:0000763,2.63e-11,108;CL:0000049,2.63e-11,108;CL:0000738,3.91e-10,136;CL:0000066,2.76e-09,253;CL:0002031,1.07e-07,120;CL:0002087,7.96e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;8.73e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.07e-17!115;UBERON:0002371!2.64e-15!80;UBERON:0001474!5.72e-15!86;UBERON:0002390!6.49e-14!102;UBERON:0003061!6.49e-14!102;UBERON:0002193!1.09e-13!112;UBERON:0000926!6.25e-13!448;UBERON:0004120!6.25e-13!448;UBERON:0006603!6.25e-13!448;UBERON:0004765!5.22e-12!101;UBERON:0001434!5.22e-12!101;UBERON:0003081!1.05e-10!216;UBERON:0004119!4.92e-09!169;UBERON:0000925!4.92e-09!169;UBERON:0006595!4.92e-09!169;UBERON:0000077!5.61e-08!130;UBERON:0002204!7.75e-08!167;UBERON:0001041!2.07e-07!98 | |ontology_enrichment_uberon=UBERON:0002405!5.07e-17!115;UBERON:0002371!2.64e-15!80;UBERON:0001474!5.72e-15!86;UBERON:0002390!6.49e-14!102;UBERON:0003061!6.49e-14!102;UBERON:0002193!1.09e-13!112;UBERON:0000926!6.25e-13!448;UBERON:0004120!6.25e-13!448;UBERON:0006603!6.25e-13!448;UBERON:0004765!5.22e-12!101;UBERON:0001434!5.22e-12!101;UBERON:0003081!1.05e-10!216;UBERON:0004119!4.92e-09!169;UBERON:0000925!4.92e-09!169;UBERON:0006595!4.92e-09!169;UBERON:0000077!5.61e-08!130;UBERON:0002204!7.75e-08!167;UBERON:0001041!2.07e-07!98 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.54e-15,76;UBERON:0001474,5.99e-15,82;UBERON:0002405,1.10e-14,93;UBERON:0002390,8.03e-14,98;UBERON:0003061,8.03e-14,98;UBERON:0002193,1.43e-13,108;UBERON:0004765,3.97e-13,90;UBERON:0001434,1.03e-11,100;UBERON:0003081,2.77e-09,203;UBERON:0004119,9.51e-09,160;UBERON:0000925,9.51e-09,160;UBERON:0006595,9.51e-09,160;UBERON:0001041,1.28e-07,87;UBERON:0002204,1.87e-07,167 | |||
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| ||
|short_description=p2@SHC1 | |short_description=p2@SHC1 | ||
}} | }} |
Latest revision as of 10:52, 17 September 2015
Short description: | p2@SHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366442, ENST00000368441, ENST00000368450, ENST00000368453_5end |
EntrezGene: | SHC1 |
HGNC: | 10840 |
UniProt: | Q5T181E9PFM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.44e-21 | 72 |
myeloid lineage restricted progenitor cell | 4.54e-17 | 66 |
granulocyte monocyte progenitor cell | 1.48e-16 | 67 |
monopoietic cell | 7.11e-15 | 59 |
monocyte | 7.11e-15 | 59 |
monoblast | 7.11e-15 | 59 |
promonocyte | 7.11e-15 | 59 |
macrophage dendritic cell progenitor | 1.50e-14 | 61 |
defensive cell | 4.84e-13 | 48 |
phagocyte | 4.84e-13 | 48 |
classical monocyte | 1.31e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-12 | 42 |
myeloid cell | 2.63e-11 | 108 |
common myeloid progenitor | 2.63e-11 | 108 |
leukocyte | 3.91e-10 | 136 |
epithelial cell | 2.76e-09 | 253 |
hematopoietic lineage restricted progenitor cell | 1.07e-07 | 120 |
nongranular leukocyte | 7.96e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-15 | 76 |
bone element | 5.99e-15 | 82 |
immune system | 1.10e-14 | 93 |
hematopoietic system | 8.03e-14 | 98 |
blood island | 8.03e-14 | 98 |
hemolymphoid system | 1.43e-13 | 108 |
skeletal element | 3.97e-13 | 90 |
skeletal system | 1.03e-11 | 100 |
lateral plate mesoderm | 2.77e-09 | 203 |
endoderm-derived structure | 9.51e-09 | 160 |
endoderm | 9.51e-09 | 160 |
presumptive endoderm | 9.51e-09 | 160 |
foregut | 1.28e-07 | 87 |
musculoskeletal system | 1.87e-07 | 167 |