FFCP PHASE1:Hg19::chr13:44947941..44947996,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=387923 | |EntrezGene=387923 | ||
Line 8: | Line 8: | ||
|UniProt=Q8N6R1 | |UniProt=Q8N6R1 | ||
|association_with_transcript=0bp_to_ENST00000379179,NM_001010897,uc001uzj.2,uc001uzk.2_5end | |association_with_transcript=0bp_to_ENST00000379179,NM_001010897,uc001uzj.2,uc001uzk.2_5end | ||
|cluster_id=chr13:44947941..44947996,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_SERP2_5end | |description=CAGE_peak_1_at_SERP2_5end |
Latest revision as of 11:12, 17 September 2015
Short description: | p1@SERP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERP2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000379179, NM_001010897, uc001uzj.2, uc001uzk.2_5end |
EntrezGene: | SERP2 |
HGNC: | 20607 |
UniProt: | Q8N6R1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SERP2 |
---|
0
10
20
30
40
50
60
70
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 8.71e-35 | 82 |
presumptive neural plate | 8.71e-35 | 82 |
structure with developmental contribution from neural crest | 1.45e-33 | 132 |
neural tube | 1.74e-33 | 56 |
neural rod | 1.74e-33 | 56 |
future spinal cord | 1.74e-33 | 56 |
neural keel | 1.74e-33 | 56 |
neurectoderm | 6.60e-33 | 86 |
regional part of nervous system | 1.61e-31 | 53 |
regional part of brain | 1.61e-31 | 53 |
Showing 1 to 10 of 66 entries