FFCP PHASE1:Hg19::chr4:26323870..26323885,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:26323870..26323885,+
|short_description=p13@RBPJ
|description=CAGE_peak_13_at_RBPJ_5end
|association_with_transcript=39bp_to_ENST00000507574_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3516 | |EntrezGene=3516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |HGNC=5724 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBQ8 | |UniProt=D6RBQ8 | ||
|association_with_transcript=39bp_to_ENST00000507574_5end | |||
|cluster_id=chr4:26323870..26323885,+ | |||
|description=CAGE_peak_13_at_RBPJ_5end | |||
|id=chr4:26323870..26323885,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.25e-11!180;CL:0000188!4.41e-08!9;CL:0000840!4.75e-07!5;CL:0001029!4.75e-07!5;CL:0000515!9.46e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000840;8.60e-23;5!CL:0000990;3.99e-15;8!CL:0000056;1.53e-12;4!CL:0000451;2.49e-12;10!CL:0001014;7.63e-12;2!CL:0001016;7.63e-12;2!CL:0000214;2.52e-08;3!CL:0000135;2.91e-08;3!CL:0000388;2.91e-08;3!CL:0002573;3.55e-08;2!CL:0000515;5.44e-08;3!CL:0002582;6.71e-08;3!CL:0000680;2.32e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,9.43e-23,5;CL:0001029,9.43e-23,5;CL:0000990,4.23e-15,8;CL:0000515,1.07e-12,4;CL:0000451,2.61e-12,10;CL:0001014,8.51e-12,2;CL:0001016,8.51e-12,2;CL:0000214,2.48e-08,3;CL:0000135,2.57e-08,3;CL:0000388,2.57e-08,3;CL:0002573,3.19e-08,2;CL:0002582,6.49e-08,3;CL:0000228,8.97e-07,1;CL:0002372,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;1.53e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.02e-07;3!DOID:127;1.02e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.49e-08,3;DOID:127,6.49e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.77e-08!83;UBERON:0002329!1.77e-08!83;UBERON:0003077!1.77e-08!83;UBERON:0003059!1.77e-08!83;UBERON:0007282!1.77e-08!83;UBERON:0009618!1.77e-08!83;UBERON:0007285!1.77e-08!83;UBERON:0000486!5.84e-08!82;UBERON:0004290!2.27e-07!70;UBERON:0004905!3.37e-07!5;UBERON:0000982!3.37e-07!5;UBERON:0004770!3.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.52e-08;3!UBERON:0007616;2.52e-08;3!UBERON:0002217;2.52e-08;3!UBERON:0002018;2.52e-08;3!UBERON:0007846;2.91e-08;3!UBERON:0000043;2.91e-08;3!UBERON:0007845;2.91e-08;3!UBERON:0001134;4.82e-08;16!UBERON:0002036;4.82e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.48e-08,3;UBERON:0007616,2.48e-08,3;UBERON:0002217,2.48e-08,3;UBERON:0002018,2.48e-08,3;UBERON:0002204,2.51e-08,167;UBERON:0007846,2.57e-08,3;UBERON:0000043,2.57e-08,3;UBERON:0007845,2.57e-08,3 | |||
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| ||
|short_description=p13@RBPJ | |||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p13@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RBPJ_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000507574_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | D6RBQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 9.43e-23 | 5 |
common dendritic progenitor | 9.43e-23 | 5 |
conventional dendritic cell | 4.23e-15 | 8 |
skeletal muscle myoblast | 1.07e-12 | 4 |
dendritic cell | 2.61e-12 | 10 |
CD1a-positive Langerhans cell | 8.51e-12 | 2 |
immature CD1a-positive Langerhans cell | 8.51e-12 | 2 |
synovial cell | 2.48e-08 | 3 |
fibrocyte | 2.57e-08 | 3 |
tendon cell | 2.57e-08 | 3 |
Schwann cell | 3.19e-08 | 2 |
visceral preadipocyte | 6.49e-08 | 3 |
multinucleate cell | 8.97e-07 | 1 |
myotube | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.48e-08 | 3 |
layer of synovial tissue | 2.48e-08 | 3 |
synovial joint | 2.48e-08 | 3 |
synovial membrane of synovial joint | 2.48e-08 | 3 |
musculoskeletal system | 2.51e-08 | 167 |
dense regular connective tissue | 2.57e-08 | 3 |
tendon | 2.57e-08 | 3 |
regular connective tissue | 2.57e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.49e-08 | 3 |
leiomyoma | 6.49e-08 | 3 |