FFCP PHASE2:Hg19::chr8:22437965..22438000,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:64236 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13992 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=64236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13992 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96JY6 | ||
|association_with_transcript=0bp_to_ENST00000409141,NM_176871,NM_198042,uc003xca.2,uc003xcb.2,uc003xcc.1_5end | |association_with_transcript=0bp_to_ENST00000409141,NM_176871,NM_198042,uc003xca.2,uc003xcb.2,uc003xcc.1_5end | ||
|cluster_id=chr8:22437965..22438000,+ | |cluster_id=chr8:22437965..22438000,+ | ||
Latest revision as of 11:55, 17 September 2015
| Short description: | p3@PDLIM2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_PDLIM2_5end |
| Coexpression cluster: | C2526_acute_CD14_CD14CD16_Whole_CD4_biphenotypic_Dendritic |
| Association with transcript: | 0bp_to_ENST00000409141, NM_176871, NM_198042, uc003xca.2, uc003xcb.2, uc003xcc.1_5end |
| EntrezGene: | PDLIM2 |
| HGNC: | 13992 |
| UniProt: | Q96JY6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@PDLIM2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 1.24e-93 | 168 |
| hematopoietic oligopotent progenitor cell | 7.94e-90 | 161 |
| hematopoietic multipotent progenitor cell | 7.94e-90 | 161 |
| hematopoietic cell | 7.22e-87 | 177 |
| nongranular leukocyte | 2.40e-79 | 115 |
| leukocyte | 6.88e-79 | 136 |
| hematopoietic lineage restricted progenitor cell | 9.78e-72 | 120 |
| myeloid cell | 1.61e-65 | 108 |
| common myeloid progenitor | 1.61e-65 | 108 |
| myeloid leukocyte | 8.49e-60 | 72 |
Showing 1 to 10 of 44 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 3.36e-55 | 98 |
| blood island | 3.36e-55 | 98 |
| hemolymphoid system | 5.98e-51 | 108 |
| bone marrow | 4.29e-41 | 76 |
| immune system | 7.52e-40 | 93 |
| bone element | 1.26e-36 | 82 |
| skeletal element | 1.27e-31 | 90 |
| skeletal system | 1.56e-26 | 100 |
| connective tissue | 4.17e-22 | 371 |
| lateral plate mesoderm | 4.81e-16 | 203 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| leukemia | 7.49e-15 | 39 |
| myeloid leukemia | 4.01e-14 | 31 |
| hematologic cancer | 1.78e-12 | 51 |
| immune system cancer | 1.78e-12 | 51 |
Showing 1 to 4 of 4 entries
