FFCP PHASE1:Hg19::chr10:18948288..18948305,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221079 | |EntrezGene=221079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23052 | |HGNC=23052 | ||
|TSSclassifier=strong | |||
|UniProt=B0YIW9,Q96KC2 | |UniProt=B0YIW9,Q96KC2 | ||
|association_with_transcript=-7bp_to_NM_178815,uc001iqd.1_5end | |association_with_transcript=-7bp_to_NM_178815,uc001iqd.1_5end | ||
|cluster_id=chr10:18948288..18948305,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_ARL5B_5end | |description=CAGE_peak_2_at_ARL5B_5end | ||
|id=chr10:18948288..18948305,+ | |id=chr10:18948288..18948305,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.08e-19!42;CL:0000860!6.22e-19!45;CL:0000766!8.38e-18!76;CL:0000839!5.85e-15!70;CL:0000557!4.40e-14!71;CL:0002009!8.41e-14!65;CL:0002194!4.07e-13!63;CL:0000576!4.07e-13!63;CL:0000040!4.07e-13!63;CL:0000559!4.07e-13!63;CL:0000763!2.68e-12!112;CL:0000049!2.68e-12!112;CL:0000738!5.14e-07!140 | |ontology_enrichment_celltype=CL:0002057!6.08e-19!42;CL:0000860!6.22e-19!45;CL:0000766!8.38e-18!76;CL:0000839!5.85e-15!70;CL:0000557!4.40e-14!71;CL:0002009!8.41e-14!65;CL:0002194!4.07e-13!63;CL:0000576!4.07e-13!63;CL:0000040!4.07e-13!63;CL:0000559!4.07e-13!63;CL:0000763!2.68e-12!112;CL:0000049!2.68e-12!112;CL:0000738!5.14e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.68e-18;33!CL:0002057;5.68e-18;33!CL:0000473;4.40e-14;39!CL:0000234;4.40e-14;39!CL:0000576;2.00e-10;48!CL:0000766;9.48e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-19,42;CL:0002057,1.12e-19,42;CL:0000473,3.88e-19,48;CL:0000234,3.88e-19,48;CL:0000766,1.20e-18,72;CL:0000839,1.36e-15,66;CL:0000557,7.08e-15,67;CL:0002009,3.11e-14,61;CL:0002194,1.68e-13,59;CL:0000576,1.68e-13,59;CL:0000040,1.68e-13,59;CL:0000559,1.68e-13,59;CL:0000763,1.20e-12,108;CL:0000049,1.20e-12,108;CL:0000738,1.60e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-14;42 | |||
|ontology_enrichment_disease=DOID:305!4.11e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.33e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.05e-09!80;UBERON:0001474!1.30e-09!86;UBERON:0002390!1.31e-08!102;UBERON:0003061!1.31e-08!102;UBERON:0004765!2.97e-08!101;UBERON:0001434!2.97e-08!101;UBERON:0002405!6.25e-07!115;UBERON:0001007!6.78e-07!155;UBERON:0001555!6.78e-07!155;UBERON:0007026!6.78e-07!155;UBERON:0004119!7.75e-07!169;UBERON:0000925!7.75e-07!169;UBERON:0006595!7.75e-07!169 | |ontology_enrichment_uberon=UBERON:0002371!1.05e-09!80;UBERON:0001474!1.30e-09!86;UBERON:0002390!1.31e-08!102;UBERON:0003061!1.31e-08!102;UBERON:0004765!2.97e-08!101;UBERON:0001434!2.97e-08!101;UBERON:0002405!6.25e-07!115;UBERON:0001007!6.78e-07!155;UBERON:0001555!6.78e-07!155;UBERON:0007026!6.78e-07!155;UBERON:0004119!7.75e-07!169;UBERON:0000925!7.75e-07!169;UBERON:0006595!7.75e-07!169 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.28e-10,76;UBERON:0001474,3.29e-10,82;UBERON:0002390,3.52e-09,98;UBERON:0003061,3.52e-09,98;UBERON:0004765,3.72e-09,90;UBERON:0001434,2.10e-08,100;UBERON:0004119,1.41e-07,160;UBERON:0000925,1.41e-07,160;UBERON:0006595,1.41e-07,160;UBERON:0002405,2.48e-07,93;UBERON:0001007,2.63e-07,145;UBERON:0001555,2.63e-07,145;UBERON:0007026,2.63e-07,145;UBERON:0002193,2.68e-07,108 | |||
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| ||
|short_description=p2@ARL5B | |short_description=p2@ARL5B | ||
}} | }} |
Latest revision as of 12:28, 17 September 2015
Short description: | p2@ARL5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARL5B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -7bp_to_NM_178815, uc001iqd.1_5end |
EntrezGene: | ARL5B |
HGNC: | 23052 |
UniProt: | B0YIW9Q96KC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.12e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-19 | 42 |
defensive cell | 3.88e-19 | 48 |
phagocyte | 3.88e-19 | 48 |
myeloid leukocyte | 1.20e-18 | 72 |
myeloid lineage restricted progenitor cell | 1.36e-15 | 66 |
granulocyte monocyte progenitor cell | 7.08e-15 | 67 |
macrophage dendritic cell progenitor | 3.11e-14 | 61 |
monopoietic cell | 1.68e-13 | 59 |
monocyte | 1.68e-13 | 59 |
monoblast | 1.68e-13 | 59 |
promonocyte | 1.68e-13 | 59 |
myeloid cell | 1.20e-12 | 108 |
common myeloid progenitor | 1.20e-12 | 108 |
leukocyte | 1.60e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.28e-10 | 76 |
bone element | 3.29e-10 | 82 |
hematopoietic system | 3.52e-09 | 98 |
blood island | 3.52e-09 | 98 |
skeletal element | 3.72e-09 | 90 |
skeletal system | 2.10e-08 | 100 |
endoderm-derived structure | 1.41e-07 | 160 |
endoderm | 1.41e-07 | 160 |
presumptive endoderm | 1.41e-07 | 160 |
immune system | 2.48e-07 | 93 |
digestive system | 2.63e-07 | 145 |
digestive tract | 2.63e-07 | 145 |
primitive gut | 2.63e-07 | 145 |
hemolymphoid system | 2.68e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.33e-08 | 106 |