FFCP PHASE1:Hg19::chr9:4985246..4985329,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:4985246..4985329,+
|short_description=p1@JAK2
|description=CAGE_peak_1_at_JAK2_5end
|association_with_transcript=1bp_to_ENST00000381652,NM_004972,uc003ziw....") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3717 | |EntrezGene=3717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6192 | |HGNC=6192 | ||
|TSSclassifier=strong | |||
|UniProt=O60674 | |UniProt=O60674 | ||
|association_with_transcript=1bp_to_ENST00000381652,NM_004972,uc003ziw.2_5end | |||
|cluster_id=chr9:4985246..4985329,+ | |||
|coexpression_cluster_id=C936 | |||
|description=CAGE_peak_1_at_JAK2_5end | |||
|id=chr9:4985246..4985329,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.58e-51!172;CL:0000566!3.58e-51!172;CL:0000988!2.25e-48!182;CL:0002032!1.56e-47!165;CL:0000837!1.56e-47!165;CL:0000738!2.20e-43!140;CL:0000763!4.49e-41!112;CL:0000049!4.49e-41!112;CL:0002031!2.29e-35!124;CL:0000766!3.01e-33!76;CL:0002087!2.27e-32!119;CL:0000557!6.70e-30!71;CL:0000839!1.92e-29!70;CL:0002009!1.15e-26!65;CL:0002194!6.64e-26!63;CL:0000576!6.64e-26!63;CL:0000040!6.64e-26!63;CL:0000559!6.64e-26!63;CL:0002057!3.71e-24!42;CL:0000860!3.82e-21!45;CL:0002320!1.79e-15!365;CL:0000134!8.45e-15!358;CL:0000219!6.74e-10!390;CL:0000838!2.74e-07!52;CL:0002393!3.62e-07!9;CL:0002397!3.62e-07!9;CL:0000542!3.77e-07!53;CL:0000051!3.77e-07!53;CL:0000451!5.65e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.08e-17;48!CL:0000860;5.24e-17;33!CL:0002057;5.24e-17;33!CL:0000473;6.13e-16;39!CL:0000234;6.13e-16;39!CL:0000766;9.87e-16;69!CL:0000763;1.28e-12;100!CL:0000738;1.15e-10;136!CL:0002087;1.55e-10;104!CL:0000988;5.11e-09;177!CL:0000451;4.39e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.05e-54,168;CL:0000988,4.19e-52,177;CL:0002032,5.54e-51,161;CL:0000837,5.54e-51,161;CL:0000738,5.49e-47,136;CL:0000763,5.91e-45,108;CL:0000049,5.91e-45,108;CL:0002031,9.28e-39,120;CL:0000766,1.24e-37,72;CL:0002087,1.19e-35,115;CL:0000557,3.64e-34,67;CL:0000839,1.05e-33,66;CL:0002009,7.53e-31,61;CL:0002194,4.27e-30,59;CL:0000576,4.27e-30,59;CL:0000040,4.27e-30,59;CL:0000559,4.27e-30,59;CL:0000473,5.16e-26,48;CL:0000234,5.16e-26,48;CL:0000860,2.98e-24,42;CL:0002057,2.98e-24,42;CL:0002320,3.38e-16,361;CL:0000134,1.64e-15,354;CL:0000219,2.00e-10,386;CL:0000838,2.18e-07,52;CL:0000542,3.01e-07,53;CL:0000051,3.01e-07,53;CL:0002393,3.43e-07,9;CL:0002397,3.43e-07,9;CL:0000451,5.36e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-17;42!CL:0000049;9.81e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.39e-37!102;UBERON:0003061!1.39e-37!102;UBERON:0002193!3.33e-35!112;UBERON:0002371!7.99e-29!80;UBERON:0001474!1.00e-25!86;UBERON:0004765!2.20e-22!101;UBERON:0001434!2.20e-22!101;UBERON:0002405!3.06e-22!115;UBERON:0002384!5.76e-15!375;UBERON:0007023!2.20e-14!115;UBERON:0003081!1.09e-09!216;UBERON:0002204!5.27e-08!167;UBERON:0000178!8.18e-08!15;UBERON:0000179!8.18e-08!15;UBERON:0000463!8.18e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.33e-08;32!UBERON:0000178;7.64e-08;15!UBERON:0000179;7.64e-08;15!UBERON:0000463;7.64e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.80e-41,98;UBERON:0003061,1.80e-41,98;UBERON:0002193,1.77e-38,108;UBERON:0002371,1.23e-32,76;UBERON:0002405,2.57e-31,93;UBERON:0001474,6.44e-29,82;UBERON:0004765,9.40e-28,90;UBERON:0001434,9.86e-26,100;UBERON:0002384,1.21e-15,371;UBERON:0007023,2.30e-14,114;UBERON:0003081,8.14e-13,203;UBERON:0002204,4.34e-09,167;UBERON:0000178,7.70e-08,15;UBERON:0000179,7.70e-08,15;UBERON:0000463,7.70e-08,15 | |||
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| ||
|short_description=p1@JAK2 | |||
}} | }} |
Latest revision as of 13:14, 17 September 2015
Short description: | p1@JAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JAK2_5end |
Coexpression cluster: | C936_CD4_CD14_granulocyte_CD14CD16_CD8_Dendritic_Hair |
Association with transcript: | 1bp_to_ENST00000381652, NM_004972, uc003ziw.2_5end |
EntrezGene: | JAK2 |
HGNC: | 6192 |
UniProt: | O60674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.80e-41 | 98 |
blood island | 1.80e-41 | 98 |
hemolymphoid system | 1.77e-38 | 108 |
bone marrow | 1.23e-32 | 76 |
immune system | 2.57e-31 | 93 |
bone element | 6.44e-29 | 82 |
skeletal element | 9.40e-28 | 90 |
skeletal system | 9.86e-26 | 100 |
connective tissue | 1.21e-15 | 371 |
adult organism | 2.30e-14 | 114 |
lateral plate mesoderm | 8.14e-13 | 203 |
musculoskeletal system | 4.34e-09 | 167 |
blood | 7.70e-08 | 15 |
haemolymphatic fluid | 7.70e-08 | 15 |
organism substance | 7.70e-08 | 15 |