FFCP PHASE1:Hg19::chr9:5510558..5510567,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80380 | |EntrezGene=80380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18731 | |HGNC=18731 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQ51 | |UniProt=Q9BQ51 | ||
|association_with_transcript=-2bp_to_ENST00000397747_5end | |association_with_transcript=-2bp_to_ENST00000397747_5end | ||
|cluster_id=chr9:5510558..5510567,+ | |||
|coexpression_cluster_id=C2021 | |coexpression_cluster_id=C2021 | ||
|description=CAGE_peak_2_at_PDCD1LG2_5end | |description=CAGE_peak_2_at_PDCD1LG2_5end | ||
|id=chr9:5510558..5510567,+ | |id=chr9:5510558..5510567,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.38e-11!119;CL:0000723!3.16e-10!436;CL:0002371!3.76e-10!591;CL:0000144!4.76e-10!625;CL:0000048!1.13e-09!430;CL:0000034!5.30e-09!444;CL:0000359!6.85e-09!32;CL:0000192!4.54e-08!42;CL:0000514!4.54e-08!42;CL:0000055!6.24e-08!180;CL:0002620!1.38e-07!23;CL:0000548!3.46e-07!679;CL:0000004!3.46e-07!679;CL:0000255!3.46e-07!679;CL:0000012!8.60e-07!682 | |ontology_enrichment_celltype=CL:0000222!4.38e-11!119;CL:0000723!3.16e-10!436;CL:0002371!3.76e-10!591;CL:0000144!4.76e-10!625;CL:0000048!1.13e-09!430;CL:0000034!5.30e-09!444;CL:0000359!6.85e-09!32;CL:0000192!4.54e-08!42;CL:0000514!4.54e-08!42;CL:0000055!6.24e-08!180;CL:0002620!1.38e-07!23;CL:0000548!3.46e-07!679;CL:0000004!3.46e-07!679;CL:0000255!3.46e-07!679;CL:0000012!8.60e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.52e-12;39!CL:0000234;7.52e-12;39!CL:0000235;2.04e-09;6!CL:0000359;6.53e-09;32!CL:0000860;1.88e-08;33!CL:0002057;1.88e-08;33!CL:0000134;2.12e-08;55!CL:0000048;6.26e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.89e-15,59;CL:0000576,2.89e-15,59;CL:0000040,2.89e-15,59;CL:0000559,2.89e-15,59;CL:0002009,1.79e-14,61;CL:0000839,1.03e-12,66;CL:0000557,2.14e-12,67;CL:0000723,3.32e-11,433;CL:0000473,5.35e-11,48;CL:0000234,5.35e-11,48;CL:0000766,6.03e-11,72;CL:0000048,9.33e-11,427;CL:0000034,1.57e-10,441;CL:0000359,6.16e-10,32;CL:0000235,1.84e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.12e-11!84;UBERON:0000055!1.72e-11!69;UBERON:0001637!5.68e-11!42;UBERON:0003509!5.68e-11!42;UBERON:0004572!5.68e-11!42;UBERON:0002204!1.10e-10!167;UBERON:0001981!1.77e-10!60;UBERON:0007500!1.77e-10!60;UBERON:0004537!1.77e-10!60;UBERON:0006965!1.77e-10!60;UBERON:0003081!7.56e-10!216;UBERON:0002049!7.61e-10!79;UBERON:0007798!7.61e-10!79;UBERON:0000914!1.50e-08!83;UBERON:0002329!1.50e-08!83;UBERON:0003077!1.50e-08!83;UBERON:0003059!1.50e-08!83;UBERON:0007282!1.50e-08!83;UBERON:0009618!1.50e-08!83;UBERON:0007285!1.50e-08!83;UBERON:0004573!2.05e-08!33;UBERON:0004571!2.05e-08!33;UBERON:0002097!4.20e-08!40;UBERON:0000486!5.98e-08!82;UBERON:0002199!2.76e-07!45;UBERON:0002416!2.76e-07!45;UBERON:0004535!2.77e-07!110;UBERON:0000947!3.46e-07!21;UBERON:0010191!3.46e-07!21;UBERON:0004290!3.74e-07!70;UBERON:0001009!7.06e-07!113 | |ontology_enrichment_uberon=UBERON:0004872!1.12e-11!84;UBERON:0000055!1.72e-11!69;UBERON:0001637!5.68e-11!42;UBERON:0003509!5.68e-11!42;UBERON:0004572!5.68e-11!42;UBERON:0002204!1.10e-10!167;UBERON:0001981!1.77e-10!60;UBERON:0007500!1.77e-10!60;UBERON:0004537!1.77e-10!60;UBERON:0006965!1.77e-10!60;UBERON:0003081!7.56e-10!216;UBERON:0002049!7.61e-10!79;UBERON:0007798!7.61e-10!79;UBERON:0000914!1.50e-08!83;UBERON:0002329!1.50e-08!83;UBERON:0003077!1.50e-08!83;UBERON:0003059!1.50e-08!83;UBERON:0007282!1.50e-08!83;UBERON:0009618!1.50e-08!83;UBERON:0007285!1.50e-08!83;UBERON:0004573!2.05e-08!33;UBERON:0004571!2.05e-08!33;UBERON:0002097!4.20e-08!40;UBERON:0000486!5.98e-08!82;UBERON:0002199!2.76e-07!45;UBERON:0002416!2.76e-07!45;UBERON:0004535!2.77e-07!110;UBERON:0000947!3.46e-07!21;UBERON:0010191!3.46e-07!21;UBERON:0004290!3.74e-07!70;UBERON:0001009!7.06e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.56e-08;42!UBERON:0003509;4.56e-08;42!UBERON:0004572;4.56e-08;42!UBERON:0004573;7.32e-08;33!UBERON:0004571;7.32e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.59e-16,203;UBERON:0002405,1.34e-14,93;UBERON:0002371,1.03e-12,76;UBERON:0002204,3.77e-12,167;UBERON:0001474,7.13e-12,82;UBERON:0004765,8.05e-12,90;UBERON:0002193,5.08e-11,108;UBERON:0000926,8.05e-11,315;UBERON:0004120,8.05e-11,315;UBERON:0006603,8.05e-11,315;UBERON:0001637,1.02e-10,42;UBERON:0003509,1.02e-10,42;UBERON:0004572,1.02e-10,42;UBERON:0002390,5.37e-10,98;UBERON:0003061,5.37e-10,98;UBERON:0001434,1.17e-09,100;UBERON:0004872,2.85e-09,83;UBERON:0000055,1.57e-08,68;UBERON:0004573,1.61e-08,33;UBERON:0004571,1.61e-08,33;UBERON:0007500,3.38e-08,59;UBERON:0001981,3.38e-08,59;UBERON:0004537,3.38e-08,59;UBERON:0006965,3.38e-08,59;UBERON:0002097,9.78e-07,41 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.986680828671798,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,1.34465029290355,2.41077811209591,0.730310090387373,1.46379839637152,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.251085279189606,0.534893840235659,0.656804715599566,0.157421562627358,0,0,0,0,0.6024118375565,0.369754010166788,0,0.142169232487422,0,0,0,0,2.23915474239924,2.26725566213286,2.06060454107349,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,5.46615545412086,5.63553554364021,3.31075121844019,0.689491361473237,1.29096936716765,1.35426486594342,0,0,0,2.14258724659632,2.24650318953266,0,4.28806690242731,5.38551875578406,2.98357325372886,1.7412554317715,0,0,4.77372463987812,4.17186334736161,6.08128765174327,1.21079900526674,1.10483290796269,2.21523671208619,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,1.78256731016278,0.294605907474837,0,0.270803863765016,0.768547918354051,1.69077151827842,0,0,0,0,0,0,0.453237370790265,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,1.44575660953827,0.50133791063589,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0.263504357079378,0.196468613246569,0,0,7.7891374477124,8.35822739036483,6.78085598646212,0,0,0,0.993812036833525,0.860234595106124,1.04142150482278,0,3.35599548967925,0.825354125820202,1.67195973229448,0.516833518338658,2.49036383880697,1.67360306382335,0.402829317109147,0,0.24406205754817,0.735326160691737,1.62028389576352,1.07159673940896,0,0.225222960966644,0,0,0.549605231791222,0,0,0.436094052142534,0.993943903390637,1.8994576749687,2.78059279707759,0.860509862246441,0,0,0,0.74000264525148,1.24484414159907,0.67355336034844,0.653847612453835,0,0,0.234321431833797,0,1.1409436430889,0.298897361103602,0.23486899728753,0.647491777472526,0.421352420106746,0.408308342509787,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0.438977620880838,0.919463387397059,0.600952235626387,0.680593098960126,3.58779271377724,0.85422955527427,3.17897851739343,3.00091096084402,1.33968288009971,0.515281080091258,0.558350568994769,2.36286865137773,1.16924406193438,1.26216887122057,0.644349290496095,0.484938170456436,4.26011511019937,3.42557133973977,0.847802961552438,3.86521706326594,2.72746120590835,2.58124135850103,0,0,0,0,0,0,1.56449532329816,0.643240938192885,2.76269842704961,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,1.64625428112938,0,1.3068766413512,0.740707561268237,0,0,0,0,0.587043471179108,0.721832238805369,0.462985512576611,1.14152491340759,0,0,5.66299114001014,2.10603838625314,2.82399208348584,0.93733833986777,4.36753533317035,2.41017665312057,0.53735113621709,0.871901815541886,0.383382679165211,0,0.176096868026452,0.621984346622316,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,2.32689088364,0,0.845302752556,2.92531928243358,1.04007436911366,0,0,0,0.57191197463259,0,0,0.65147236858747,0.710783897485092,0,0.602878754119172,1.74306691720059,0.399891964728228,2.43247561282381,1.50677127429638,6.32501818449095,1.19812427745791,0,0,1.59259437334337,0,1.43248770591916,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0.828831026872071,0,0,0,0,3.7470087647404,2.20783381047509,3.16281820480326,0.300946099727719,0,0,0,0.553107505625109,1.12948698808508,0,0,0,0,0,0,0,0.30239029332968,0,1.2276957863045,0.280660094433074,0.384417447767103,0.511707249066704,0.804269605718038,0,1.69630663182921,0.355123450626254,0.657017248110473,2.59627214591811,0.581051892299796,0,1.60405176242628,0,0.803701137152247,0.910455840033585,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,1.14853107599234,0.650060246036521,3.21367859688319,0.096670718292122,0.462145851343933,0.460511024178389,0,0.107420244868274,0.435050081742686,0,0,0.495854746082934,0.384380134730212,3.44554323735377,0.10115778085555,0.929691098594572,3.1481234683064,0.6970372701606,4.31247012246524,1.06461206063404,1.73986598415015,2.7798632865588,0.572499546967965,0,0.949138274156178,0.762520775695299,0.255897791311334,0,1.27281299170375,0,0.359744915166629,0.274537029736055,0.471249609382746,2.62837226045311,0,1.68503382495592,0,6.33655073041339,0,0.545999645631943,0.424216295861138,0,0,0.66343897524122,3.5076070820301,0,0,2.43492452355245,1.239293992399,0.563391205064483,1.57752487424457,1.3754865741837,1.07001315444375,0.354761064070598,0,0.329294892959902,0,0,0.865999014529609,0,0,0.282431402330337,0,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0.667852230137435,0.16480387422676,0,0,0.276283915531148,0,0,0.861593638227486,11.8195043311487,0.718946809178615,0,0,0.493217028184668,0,4.44547960578548,0,0,0,0,0,0,0,0,0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| ||
|short_description=p2@PDCD1LG2 | |short_description=p2@PDCD1LG2 | ||
}} | }} |
Latest revision as of 13:50, 17 September 2015
Short description: | p2@PDCD1LG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDCD1LG2_5end |
Coexpression cluster: | C2021_basal_mesenchymal_Dendritic_Smooth_Fibroblast_Aortic_Mallassezderived |
Association with transcript: | -2bp_to_ENST00000397747_5end |
EntrezGene: | PDCD1LG2 |
HGNC: | 18731 |
UniProt: | Q9BQ51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.89e-15 | 59 |
monocyte | 2.89e-15 | 59 |
monoblast | 2.89e-15 | 59 |
promonocyte | 2.89e-15 | 59 |
macrophage dendritic cell progenitor | 1.79e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.03e-12 | 66 |
granulocyte monocyte progenitor cell | 2.14e-12 | 67 |
somatic stem cell | 3.32e-11 | 433 |
defensive cell | 5.35e-11 | 48 |
phagocyte | 5.35e-11 | 48 |
myeloid leukocyte | 6.03e-11 | 72 |
multi fate stem cell | 9.33e-11 | 427 |
stem cell | 1.57e-10 | 441 |
vascular associated smooth muscle cell | 6.16e-10 | 32 |
macrophage | 1.84e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.59e-16 | 203 |
immune system | 1.34e-14 | 93 |
bone marrow | 1.03e-12 | 76 |
musculoskeletal system | 3.77e-12 | 167 |
bone element | 7.13e-12 | 82 |
skeletal element | 8.05e-12 | 90 |
hemolymphoid system | 5.08e-11 | 108 |
mesoderm | 8.05e-11 | 315 |
mesoderm-derived structure | 8.05e-11 | 315 |
presumptive mesoderm | 8.05e-11 | 315 |
artery | 1.02e-10 | 42 |
arterial blood vessel | 1.02e-10 | 42 |
arterial system | 1.02e-10 | 42 |
hematopoietic system | 5.37e-10 | 98 |
blood island | 5.37e-10 | 98 |
skeletal system | 1.17e-09 | 100 |
splanchnic layer of lateral plate mesoderm | 2.85e-09 | 83 |
vessel | 1.57e-08 | 68 |
systemic artery | 1.61e-08 | 33 |
systemic arterial system | 1.61e-08 | 33 |
epithelial tube open at both ends | 3.38e-08 | 59 |
blood vessel | 3.38e-08 | 59 |
blood vasculature | 3.38e-08 | 59 |
vascular cord | 3.38e-08 | 59 |
skin of body | 9.78e-07 | 41 |