FFCP PHASE1:Hg19::chr7:19157043..19157088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7291 | |EntrezGene=7291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12428 | |HGNC=12428 | ||
|TSSclassifier=strong | |||
|UniProt=Q15672 | |UniProt=Q15672 | ||
|association_with_transcript=206bp_to_ENST00000242261,NM_000474,uc003sum.2_5end | |association_with_transcript=206bp_to_ENST00000242261,NM_000474,uc003sum.2_5end | ||
|cluster_id=chr7:19157043..19157088,- | |||
|description=CAGE_peak_2_at_TWIST1_5end | |description=CAGE_peak_2_at_TWIST1_5end | ||
|id=chr7:19157043..19157088,- | |id=chr7:19157043..19157088,- | ||
|ontology_enrichment_celltype=CL:0000055!1.11e-39!180;CL:0000057!3.14e-22!75;CL:0000680!6.79e-14!57;CL:0000056!6.79e-14!57;CL:0000355!6.79e-14!57;CL:0000183!4.40e-13!59;CL:0000187!5.05e-13!54;CL:0000393!2.28e-10!60;CL:0000211!2.28e-10!60;CL:0000192!6.65e-09!42;CL:0000514!6.65e-09!42;CL:0000136!1.27e-08!15;CL:0000499!1.10e-07!27;CL:0002620!3.58e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.11e-39!180;CL:0000057!3.14e-22!75;CL:0000680!6.79e-14!57;CL:0000056!6.79e-14!57;CL:0000355!6.79e-14!57;CL:0000183!4.40e-13!59;CL:0000187!5.05e-13!54;CL:0000393!2.28e-10!60;CL:0000211!2.28e-10!60;CL:0000192!6.65e-09!42;CL:0000514!6.65e-09!42;CL:0000136!1.27e-08!15;CL:0000499!1.10e-07!27;CL:0002620!3.58e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000057;1.36e-09;73!CL:0000187;1.43e-08;55!CL:0002320;2.00e-08;188!CL:0000499;2.55e-08;28!CL:0000136;6.01e-08;13!CL:0002620;1.11e-07;23!CL:0000192;5.48e-07;43!CL:0000327;7.13e-07;15!CL:0000723;9.17e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.73e-23,76;CL:0000680,4.28e-15,58;CL:0000056,4.28e-15,58;CL:0000355,4.28e-15,58;CL:0000187,3.70e-14,55;CL:0000393,1.06e-10,61;CL:0000211,1.06e-10,61;CL:0000192,9.94e-10,43;CL:0000514,9.94e-10,43;CL:0000136,3.94e-09,15;CL:0000499,2.86e-08,28;CL:0002620,1.41e-07,23;CL:0000048,3.54e-07,427;CL:0000327,7.21e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;1.14e-08;58!CL:0000514;5.48e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.68e-19!83;UBERON:0002329!9.68e-19!83;UBERON:0003077!9.68e-19!83;UBERON:0003059!9.68e-19!83;UBERON:0007282!9.68e-19!83;UBERON:0009618!9.68e-19!83;UBERON:0007285!9.68e-19!83;UBERON:0004290!9.91e-17!70;UBERON:0000486!2.62e-14!82;UBERON:0001134!6.72e-14!61;UBERON:0002036!6.72e-14!61;UBERON:0003082!6.72e-14!61;UBERON:0002385!7.45e-14!63;UBERON:0001015!7.45e-14!63;UBERON:0000383!7.45e-14!63;UBERON:0003102!3.87e-12!95;UBERON:0000475!7.94e-09!365;UBERON:0001013!2.75e-08!14;UBERON:0002199!2.80e-08!45;UBERON:0002416!2.80e-08!45;UBERON:0005256!6.08e-08!143 | |ontology_enrichment_uberon=UBERON:0000914!9.68e-19!83;UBERON:0002329!9.68e-19!83;UBERON:0003077!9.68e-19!83;UBERON:0003059!9.68e-19!83;UBERON:0007282!9.68e-19!83;UBERON:0009618!9.68e-19!83;UBERON:0007285!9.68e-19!83;UBERON:0004290!9.91e-17!70;UBERON:0000486!2.62e-14!82;UBERON:0001134!6.72e-14!61;UBERON:0002036!6.72e-14!61;UBERON:0003082!6.72e-14!61;UBERON:0002385!7.45e-14!63;UBERON:0001015!7.45e-14!63;UBERON:0000383!7.45e-14!63;UBERON:0003102!3.87e-12!95;UBERON:0000475!7.94e-09!365;UBERON:0001013!2.75e-08!14;UBERON:0002199!2.80e-08!45;UBERON:0002416!2.80e-08!45;UBERON:0005256!6.08e-08!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.11e-09;198!UBERON:0001013;1.07e-08;14!UBERON:0002204;2.21e-08;70!UBERON:0001434;5.69e-08;36!UBERON:0002385;1.75e-07;31!UBERON:0001015;1.75e-07;31!UBERON:0000383;1.75e-07;31!UBERON:0004905;6.30e-07;8!UBERON:0000982;6.30e-07;8!UBERON:0004770;6.30e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.00e-18,73;UBERON:0002329,7.95e-18,71;UBERON:0003059,7.95e-18,71;UBERON:0007282,7.95e-18,71;UBERON:0004290,7.95e-18,71;UBERON:0009618,7.95e-18,71;UBERON:0003077,1.18e-17,72;UBERON:0007285,1.18e-17,72;UBERON:0000486,2.87e-15,83;UBERON:0007503,5.22e-15,78;UBERON:0001134,8.55e-15,62;UBERON:0002036,8.55e-15,62;UBERON:0003082,8.55e-15,62;UBERON:0002385,1.36e-14,64;UBERON:0001015,1.36e-14,64;UBERON:0000383,1.36e-14,64;UBERON:0003102,1.03e-10,99;UBERON:0003104,2.49e-09,160;UBERON:0009142,2.49e-09,160;UBERON:0005256,4.08e-09,122;UBERON:0002199,6.11e-09,46;UBERON:0002416,6.11e-09,46;UBERON:0001013,8.99e-09,14;UBERON:0004905,6.28e-07,8;UBERON:0000982,6.28e-07,8;UBERON:0004770,6.28e-07,8;UBERON:0002097,7.92e-07,41 | |||
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|phase1_expression=12.8991649282095,17.1280419112787,6.3429481843187,18.0131937035635,10.7270662662549,13.9574163856059,27.8629865985142,17.6881564559513,26.6409340763835,1.22866968250754,0,0.218441372130172,3.16520373874144,29.332625651531,40.0990824630778,5.3786011716142,7.23233433628772,6.57279081348636,3.41552959153355,13.1739532142163,21.0120711981581,13.1650983020797,0.572471974262113,1.09499540058307,2.00868223351684,0,0,0,0,0,0,3.67768489791571,4.2168828628955,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,12.1903433156981,11.4019146149618,8.31106651982947,22.7706666002277,12.0321098552613,29.8383829059297,6.36228757640879,17.5188553308949,2.9305793320861,1.77383517970051,2.98638271356629,2.5540919722054,0,0,1.29818957461873,0.522389211897802,0.398873881556595,0,0,0,0.993812036833525,0.860234595106124,0.347140501607594,2.82653970962005,0,0,1.46296476575767,0,0,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.549605231791222,0,0,6.97750483428055,13.4182426957736,8.737505304856,4.8991396900891,15.7760141411848,12.0587249947441,6.72813120170769,6.4049397437823,9.37336683985208,10.5811752035921,14.0099098952476,8.66348086501331,8.47601594811616,13.25204626304,28.821536115557,13.4228833037038,5.13424639390004,20.0261231939413,14.4444433331831,11.6548519945055,8.00569598202816,16.9447962141561,13.0204376350474,40.1937288773728,24.9480600029231,19.534087413006,5.46096817162816,21.5585442544872,14.3085696860956,13.888155705788,11.3596287348515,19.7539929396377,22.3736090933284,38.010228903369,11.7969470486422,9.32826105582082,13.0270007179326,7.62954844174423,9.00273288253207,11.4388307454667,11.3361837620077,11.9114788052217,7.42615861861571,8.18470843354068,13.6314238091822,10.6777882425067,13.4166227159614,7.81021103536552,9.47069723339819,7.46066606166146,0,0.818238361772504,0.286804595389004,1.09776335516636,0.132529768321485,1.74290914304278,3.31715376049185,2.27088765788066,0,15.6449532329816,14.1513006402435,13.8134921352481,27.3977077538868,24.5439023767659,3.785817601275,3.54027849164014,2.6511213287183,3.52940712743661,3.7039505495709,3.79632990577755,5.66291494272691,3.33576490713088,3.8474715694639,0,8.41450642820675,10.7009242946164,19.1111324801205,0,0,0,0,0,4.46076306776166,0,0,0.301586917234893,1.574003567695,21.1775398451711,22.8785652761507,1.44331342025273,1.04337364477569,5.04857385214033,0.144366447761074,0,0,0,0,0,0,0,0,0,0,12.0008420421817,11.0440896635306,6.13412286664338,0,0.176096868026452,0.621984346622316,0.144119953416961,0.12624243342638,0.063497894292169,0,0,11.9750712215894,0.102827492703324,0,0.285826432630578,9.64327325370102,10.899001720832,7.84719658284165,6.59285750364667,78.6844180874141,21.977871566456,6.38251479803689,7.28052058379563,19.5477604439228,25.5328437641901,20.2480856052236,11.58121748631,23.3327290318321,16.4648067356154,20.1956434262116,16.3480296421571,21.3827005692026,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,11.501993063596,24.1210065251639,22.8219048065149,9.70034754672781,12.9450083206742,13.2505112797523,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,31.531713371819,43.0146648111322,31.1954777254696,12.0623099687868,14.9880350589616,21.4475284446151,14.5255354590964,15.9501432855691,20.4666753650386,32.0766521006765,13.9487375692442,15.3026409889614,14.3357963872337,42.4888511694147,35.686916076329,0,0,0,0.303127571446259,3.32870879020994,2.72151263996712,6.69891081110698,8.28694655755537,13.7523446272206,5.63812256725084,5.11707249066703,9.49038134747284,11.8734453155993,13.7246627484363,14.7376232009895,15.0292695505271,13.5006151587741,16.6180841197742,0.120859449591622,1.60405176242628,0.828728900423067,6.42960909721798,9.28664956834257,7.6052160676466,0,1.00119938235739,0,0,0,0,0,0.647747748306418,3.08454505380579,2.43851793789468,1.00337954770971,0,0,0.671624264166535,0,0,0.256450125116389,0.328014645699706,2.27764876265012,9.89193711818134,5.86044574837398,4.45551299571175,0,0,3.21367859688319,11.4071447584704,16.9453478826109,18.2669372924094,14.6106766833602,21.0543679941816,23.6377211080192,15.3407929348982,5.78708231703793,0.165284915360978,0.768760269460425,0.255225424989168,0.30347334256665,16.269594225405,8.18512101759664,6.970372701606,12.6293767872196,7.98459045475533,11.3091288969759,4.633105477598,8.44436831777748,8.18748412591268,5.37845022021834,10.6752908597342,16.121560852614,11.9822916649498,7.31867470229655,11.7742296029885,11.6917097429155,10.9814811894422,11.5456154298773,7.48075181821269,4.75530963519025,16.4290797933203,14.6290121726877,16.3288038052961,12.6780176108107,5.59649636772742,7.7772987574542,19.2113798254413,5.51365343546124,8.62470667813585,2.63070531152258,19.6783681650674,22.3004215695855,3.04365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| ||
|short_description=p2@TWIST1 | |short_description=p2@TWIST1 | ||
}} | }} |
Latest revision as of 14:57, 17 September 2015
Short description: | p2@TWIST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TWIST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 206bp_to_ENST00000242261, NM_000474, uc003sum.2_5end |
EntrezGene: | TWIST1 |
HGNC: | 12428 |
UniProt: | Q15672 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.73e-23 | 76 |
muscle precursor cell | 4.28e-15 | 58 |
myoblast | 4.28e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.28e-15 | 58 |
muscle cell | 3.70e-14 | 55 |
electrically responsive cell | 1.06e-10 | 61 |
electrically active cell | 1.06e-10 | 61 |
smooth muscle cell | 9.94e-10 | 43 |
smooth muscle myoblast | 9.94e-10 | 43 |
fat cell | 3.94e-09 | 15 |
stromal cell | 2.86e-08 | 28 |
skin fibroblast | 1.41e-07 | 23 |
multi fate stem cell | 3.54e-07 | 427 |
extracellular matrix secreting cell | 7.21e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.00e-18 | 73 |
somite | 7.95e-18 | 71 |
presomitic mesoderm | 7.95e-18 | 71 |
presumptive segmental plate | 7.95e-18 | 71 |
dermomyotome | 7.95e-18 | 71 |
trunk paraxial mesoderm | 7.95e-18 | 71 |
paraxial mesoderm | 1.18e-17 | 72 |
presumptive paraxial mesoderm | 1.18e-17 | 72 |
multilaminar epithelium | 2.87e-15 | 83 |
epithelial vesicle | 5.22e-15 | 78 |
skeletal muscle tissue | 8.55e-15 | 62 |
striated muscle tissue | 8.55e-15 | 62 |
myotome | 8.55e-15 | 62 |
muscle tissue | 1.36e-14 | 64 |
musculature | 1.36e-14 | 64 |
musculature of body | 1.36e-14 | 64 |
surface structure | 1.03e-10 | 99 |
mesenchyme | 2.49e-09 | 160 |
entire embryonic mesenchyme | 2.49e-09 | 160 |
trunk mesenchyme | 4.08e-09 | 122 |
integument | 6.11e-09 | 46 |
integumental system | 6.11e-09 | 46 |
adipose tissue | 8.99e-09 | 14 |
articulation | 6.28e-07 | 8 |
skeletal joint | 6.28e-07 | 8 |
articular system | 6.28e-07 | 8 |
skin of body | 7.92e-07 | 41 |