FFCP PHASE1:Hg19::chr6:30080863..30080872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11074 | |EntrezGene=11074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16289 | |HGNC=16289 | ||
|TSSclassifier=strong | |||
|UniProt=A6NI17,Q2L6J1,Q9BZY9 | |UniProt=A6NI17,Q2L6J1,Q9BZY9 | ||
|association_with_transcript=0bp_to_ENST00000376728,ENST00000540829,NM_007028,uc003npg.1,uc003npi.3_5end | |association_with_transcript=0bp_to_ENST00000376728,ENST00000540829,NM_007028,uc003npg.1,uc003npi.3_5end | ||
|cluster_id=chr6:30080863..30080872,- | |||
|description=CAGE_peak_1_at_TRIM31_5end | |description=CAGE_peak_1_at_TRIM31_5end | ||
|id=chr6:30080863..30080872,- | |id=chr6:30080863..30080872,- | ||
|ontology_enrichment_celltype=CL:1000415!4.98e-08!2 | |ontology_enrichment_celltype=CL:1000415!4.98e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009497;6.18e-09;13!UBERON:0001045;1.48e-08;1!UBERON:0006242;3.28e-08;1 | |||
|ontology_enrichment_disease=DOID:4929!1.24e-08!2;DOID:305!1.58e-08!106;DOID:3493!4.80e-08!2;DOID:299!6.17e-08!25 | |ontology_enrichment_disease=DOID:4929!1.24e-08!2;DOID:305!1.58e-08!106;DOID:3493!4.80e-08!2;DOID:299!6.17e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:4929;2.16e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.59e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.17e-17!35;UBERON:0000160!2.91e-14!27;UBERON:0001007!1.28e-13!155;UBERON:0001555!1.28e-13!155;UBERON:0007026!1.28e-13!155;UBERON:0002294!5.42e-13!7;UBERON:0001173!5.42e-13!7;UBERON:0004912!5.42e-13!7;UBERON:0004921!1.34e-12!129;UBERON:0004185!1.34e-12!129;UBERON:0004119!6.70e-12!169;UBERON:0000925!6.70e-12!169;UBERON:0006595!6.70e-12!169;UBERON:0002110!2.61e-11!3;UBERON:0006242!2.61e-11!3;UBERON:0009497!3.35e-10!25;UBERON:0000015!3.35e-10!25;UBERON:0002423!3.35e-10!25;UBERON:0006235!3.35e-10!25;UBERON:0004161!3.35e-10!25;UBERON:0000059!1.10e-08!11;UBERON:0000077!4.58e-08!130;UBERON:0001255!5.95e-08!2;UBERON:0001556!5.95e-08!2;UBERON:0001155!4.61e-07!9;UBERON:0003929!5.58e-07!54;UBERON:0009854!5.84e-07!23 | |ontology_enrichment_uberon=UBERON:0005409!2.17e-17!35;UBERON:0000160!2.91e-14!27;UBERON:0001007!1.28e-13!155;UBERON:0001555!1.28e-13!155;UBERON:0007026!1.28e-13!155;UBERON:0002294!5.42e-13!7;UBERON:0001173!5.42e-13!7;UBERON:0004912!5.42e-13!7;UBERON:0004921!1.34e-12!129;UBERON:0004185!1.34e-12!129;UBERON:0004119!6.70e-12!169;UBERON:0000925!6.70e-12!169;UBERON:0006595!6.70e-12!169;UBERON:0002110!2.61e-11!3;UBERON:0006242!2.61e-11!3;UBERON:0009497!3.35e-10!25;UBERON:0000015!3.35e-10!25;UBERON:0002423!3.35e-10!25;UBERON:0006235!3.35e-10!25;UBERON:0004161!3.35e-10!25;UBERON:0000059!1.10e-08!11;UBERON:0000077!4.58e-08!130;UBERON:0001255!5.95e-08!2;UBERON:0001556!5.95e-08!2;UBERON:0001155!4.61e-07!9;UBERON:0003929!5.58e-07!54;UBERON:0009854!5.84e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.96e-36;22!UBERON:0000160;1.64e-31;17!UBERON:0002108;1.51e-23;4!UBERON:0004921;1.08e-20;33!UBERON:0000059;1.27e-16;11!UBERON:0002294;2.33e-16;7!UBERON:0001173;2.33e-16;7!UBERON:0001155;3.02e-13;9!UBERON:0002114;9.55e-11;2!UBERON:0002110;4.00e-10;3!UBERON:0002423;1.13e-09;25!UBERON:0001154;1.48e-08;1!UBERON:0001153;1.48e-08;1!UBERON:0009854;1.48e-08;1!UBERON:0004913;2.13e-08;1!UBERON:0003703;2.13e-08;1!UBERON:0001174;2.13e-08;1!UBERON:0004914;2.13e-08;1!UBERON:0002394;3.41e-08;4!UBERON:0003928;3.41e-08;4!UBERON:0001555;1.22e-07;54!UBERON:0001007;2.24e-07;81!UBERON:0004907;8.05e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.47e-32,25;UBERON:0000160,1.79e-31,17;UBERON:0002108,1.70e-23,4;UBERON:0000059,1.29e-16,11;UBERON:0001155,3.02e-13,9;UBERON:0002294,9.03e-13,9;UBERON:0001173,9.03e-13,9;UBERON:0004912,9.03e-13,9;UBERON:0001007,1.84e-12,145;UBERON:0001555,1.84e-12,145;UBERON:0007026,1.84e-12,145;UBERON:0004921,1.97e-12,118;UBERON:0004119,5.61e-11,160;UBERON:0000925,5.61e-11,160;UBERON:0006595,5.61e-11,160;UBERON:0002114,1.05e-10,2;UBERON:0002110,4.00e-10,3;UBERON:0006242,4.00e-10,3;UBERON:0009497,1.14e-09,25;UBERON:0000015,1.14e-09,25;UBERON:0002423,1.14e-09,25;UBERON:0006235,1.14e-09,25;UBERON:0004161,1.14e-09,25;UBERON:0001154,1.71e-08,1;UBERON:0001153,1.71e-08,1;UBERON:0001045,1.71e-08,1;UBERON:0004913,2.46e-08,1;UBERON:0003703,2.46e-08,1;UBERON:0001174,2.46e-08,1;UBERON:0004914,2.46e-08,1;UBERON:0009854,1.35e-07,23;UBERON:0011216,8.21e-07,223;UBERON:0004907,8.65e-07,5 | |||
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| ||
|short_description=p1@TRIM31 | |short_description=p1@TRIM31 | ||
}} | }} |
Latest revision as of 15:36, 17 September 2015
Short description: | p1@TRIM31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM31_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376728, ENST00000540829, NM_007028, uc003npg.1, uc003npi.3_5end |
EntrezGene: | TRIM31 |
HGNC: | 16289 |
UniProt: | A6NI17Q2L6J1Q9BZY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 9.47e-32 | 25 |
intestine | 1.79e-31 | 17 |
small intestine | 1.70e-23 | 4 |
large intestine | 1.29e-16 | 11 |
colon | 3.02e-13 | 9 |
biliary system | 9.03e-13 | 9 |
biliary tree | 9.03e-13 | 9 |
biliary bud | 9.03e-13 | 9 |
digestive system | 1.84e-12 | 145 |
digestive tract | 1.84e-12 | 145 |
primitive gut | 1.84e-12 | 145 |
subdivision of digestive tract | 1.97e-12 | 118 |
endoderm-derived structure | 5.61e-11 | 160 |
endoderm | 5.61e-11 | 160 |
presumptive endoderm | 5.61e-11 | 160 |
duodenum | 1.05e-10 | 2 |
gallbladder | 4.00e-10 | 3 |
gall bladder primordium | 4.00e-10 | 3 |
epithelium of foregut-midgut junction | 1.14e-09 | 25 |
anatomical boundary | 1.14e-09 | 25 |
hepatobiliary system | 1.14e-09 | 25 |
foregut-midgut junction | 1.14e-09 | 25 |
septum transversum | 1.14e-09 | 25 |
vermiform appendix | 1.71e-08 | 1 |
caecum | 1.71e-08 | 1 |
midgut | 1.71e-08 | 1 |
hepatopancreatic ampulla | 2.46e-08 | 1 |
extrahepatic bile duct | 2.46e-08 | 1 |
common bile duct | 2.46e-08 | 1 |
duodenal papilla | 2.46e-08 | 1 |
digestive tract diverticulum | 1.35e-07 | 23 |
organ system subdivision | 8.21e-07 | 223 |
lower digestive tract | 8.65e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.59e-15 | 2 |