FFCP PHASE1:Hg19::chr17:74534001..74534013,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:74534001..74534013,- to FFCP PHASE1:Hg19::chr17:74534001..74534013,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114757 | |EntrezGene=114757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |HGNC=16505 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWM9 | |UniProt=Q8WWM9 | ||
|association_with_transcript=-219bp_to_ENST00000293230,NM_134268,uc002jru.1_5end | |||
|cluster_id=chr17:74534001..74534013,- | |||
|coexpression_cluster_id=C1231 | |||
|description=CAGE_peak_4_at_CYGB_5end | |||
|id=chr17:74534001..74534013,- | |||
|ontology_enrichment_celltype=CL:0000055!6.84e-11!180;CL:0000183!2.19e-08!59;CL:0000680!1.78e-07!57;CL:0000056!1.78e-07!57;CL:0000355!1.78e-07!57;CL:0000187!2.32e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,7.88e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.58e-16!347;UBERON:0000475!8.23e-16!365;UBERON:0000119!4.76e-15!312;UBERON:0000483!5.83e-15!309;UBERON:0007023!2.20e-14!115;UBERON:0000468!1.01e-13!659;UBERON:0002100!1.18e-12!216;UBERON:0000486!6.84e-12!82;UBERON:0003103!1.59e-11!69;UBERON:0005256!2.41e-11!143;UBERON:0000922!9.91e-10!612;UBERON:0000914!1.67e-09!83;UBERON:0002329!1.67e-09!83;UBERON:0003077!1.67e-09!83;UBERON:0003059!1.67e-09!83;UBERON:0007282!1.67e-09!83;UBERON:0009618!1.67e-09!83;UBERON:0007285!1.67e-09!83;UBERON:0000467!2.00e-09!625;UBERON:0002385!2.23e-09!63;UBERON:0001015!2.23e-09!63;UBERON:0000383!2.23e-09!63;UBERON:0000480!2.88e-09!626;UBERON:0003104!4.15e-09!238;UBERON:0009142!4.15e-09!238;UBERON:0002050!6.09e-09!605;UBERON:0005423!6.09e-09!605;UBERON:0000923!9.21e-09!604;UBERON:0005291!9.21e-09!604;UBERON:0006598!9.21e-09!604;UBERON:0002532!9.21e-09!604;UBERON:0000477!1.12e-08!286;UBERON:0001134!1.32e-08!61;UBERON:0002036!1.32e-08!61;UBERON:0003082!1.32e-08!61;UBERON:0007100!1.34e-08!27;UBERON:0004290!3.66e-08!70;UBERON:0004111!1.43e-07!241;UBERON:0000948!2.88e-07!24;UBERON:0005498!2.88e-07!24;UBERON:0004140!2.88e-07!24;UBERON:0009881!2.88e-07!24;UBERON:0004141!2.88e-07!24;UBERON:0003084!2.88e-07!24;UBERON:0007005!2.88e-07!24;UBERON:0004139!2.88e-07!24;UBERON:0004291!2.88e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.78e-09;25!UBERON:0004457;8.07e-08;9!UBERON:0000042;8.07e-08;9!UBERON:0007196;8.18e-08;15!UBERON:0001558;8.18e-08;15!UBERON:0000948;2.89e-07;22!UBERON:0000486;5.39e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.19e-10,83;UBERON:0003103,1.89e-10,68;UBERON:0007100,1.97e-10,27;UBERON:0002100,2.18e-10,199;UBERON:0007023,4.70e-09,114;UBERON:0000948,1.11e-08,24;UBERON:0005498,1.11e-08,24;UBERON:0004140,1.11e-08,24;UBERON:0009881,1.11e-08,24;UBERON:0004141,1.11e-08,24;UBERON:0003084,1.11e-08,24;UBERON:0007005,1.11e-08,24;UBERON:0004139,1.11e-08,24;UBERON:0004291,1.11e-08,24;UBERON:0004119,2.37e-08,160;UBERON:0000925,2.37e-08,160;UBERON:0006595,2.37e-08,160;UBERON:0002385,2.89e-08,64;UBERON:0001015,2.89e-08,64;UBERON:0000383,2.89e-08,64;UBERON:0000483,7.82e-08,306;UBERON:0003104,7.99e-08,160;UBERON:0009142,7.99e-08,160;UBERON:0000119,9.22e-08,309;UBERON:0007196,9.53e-08,15;UBERON:0001558,9.53e-08,15;UBERON:0005256,1.71e-07,122;UBERON:0001134,2.12e-07,62;UBERON:0002036,2.12e-07,62;UBERON:0003082,2.12e-07,62;UBERON:0004457,2.86e-07,12;UBERON:0000042,2.86e-07,12 | |||
|phase1_expression=9.6289541013395,2.99740733447376,4.79244973926302,1.0007329835313,5.36353313312745,0.872338524100369,0,2.52687949370732,4.17897005119742,2.21160542851358,0.697801167972428,0.873765488520689,1.31883489114227,1.36142988256051,0.662794751455832,0,0,0,0,0.738726348460727,1.22400414746552,0,0,0,0,0,0,0,0,0,0,2.75826367343678,6.32532429434325,1.10926203050036,0,0,0,0,0,0,1.34349284543955,1.94336199611388,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,3.35350429851818,2.55725123687061,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0.756278537312543,0.443458794925128,0.43917392846563,2.42311289670768,3.27865759463288,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.06729878806013,0,0.402829317109147,0.760272105718513,1.22031028774085,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,3.48875241714027,1.98788780678127,0.12663051166458,0.132409180813219,1.14734648299525,0.709336764396714,1.12135520028461,0,0,4.04574346019696,1.75123873690594,4.57693328717684,3.32986340818849,0.576175924479999,1.17160715916898,1.5608003841516,1.71141546463335,0.747243402759005,0.23486899728753,0,0.140450806702248,0,1.71968044236475,0,0,0.494533858557114,3.64064544775211,12.2165084108761,0.673344455816265,1.25118519871964,0,0,0.30648779579902,1.80285670687916,2.04177929688038,0,0.213557388818567,0.635795703478686,0,0.103052529238439,0.257640540045629,1.11670113798954,0.168776332241266,0.389748020644795,0,0.460249493211497,1.45481451136931,0,0.302256294682921,0.169560592310488,5.9910864480622,8.45512973831587,3.44165514466805,0.731842236777572,0.927708378250397,0.69716365721711,0.621966330092223,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,4.5273141246454,8.82052268313252,0,0,1.18157981336281,0,0,1.71567810298526,2.41450627898976,0,0,2.87024179991442,3.9096996637239,4.15973914111831,0,0.811512834825538,0.587043471179108,0.433099343283221,0.925971025153221,0.190254152234598,0,0,0,0,0,5.62403003920662,4.70349958956807,3.1190521393325,0,0,0.383382679165211,0,0,0,0.288239906833923,0.12624243342638,7.42925363218378,19.4814097034722,29.3043618025117,15.3965201420435,6.78661451841935,5.1058319833466,9.71809870943966,1.12131084345361,0,0.80672114403045,0.258543431515556,28.6125156681506,0,0.797814349754612,0,0,0,1.0656887160644,5.43316375900961,4.88359444852299,4.93944202068461,1.62868092146868,5.68627117988073,0.791951872933429,0,0,0,0,0,0,0.958499421966331,0,2.85273810081437,0.144781306667579,0.410952645100767,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,1.96306386750624,1.00034104211935,1.89885516589815,0,0,0,0,4.51419149591578,13.6444502433591,3.10419213877515,0,0,0.955719759148911,2.93701736194111,2.40200396667599,0,0,0,0,0,0,9.6762045049323,2.91577749247319,4.77122160536225,11.148105985246,5.11707249066703,1.28683136914886,5.93672265779964,0,1.77561725313127,1.06765302817952,1.03850885836724,0.697262270759755,0,2.80709058424599,0.276242966807689,1.83703117063371,2.00300284807389,5.76947425821466,1.35359883872224,0.924184045252977,0,1.46139224653261,0.422206515571503,0,0.170093705276516,0.215915916102139,1.54227252690289,0.812839312631559,2.00675909541941,0.764628819135115,0.831076008928724,1.11937377361089,0,0,0.512900250232778,0,0,1.64865618636356,0,0,13.7823729119081,5.20048196829217,3.21367859688319,2.22342652071881,1.07834031980251,1.5350367472613,0.964856007391714,4.51165028446749,3.0453505721988,1.61930592090592,0.267096106940212,2.80984356113663,4.03599141466723,1.40373983744043,1.51736671283325,0.464845549297286,0,1.3940745403212,0.308033580176089,1.06461206063404,0.869932992075073,0,0,0.744316738719335,1.89827654831236,1.33441135746677,5.11795582622668,1.71175595213568,5.40945521474092,0,5.03642881233281,4.11805544604082,3.65218447271628,0.808729926293264,3.17020642346017,1.68503382495592,7.80213982543345,0.487426979262569,1.05650146756755,2.72999822815972,5.65621727814851,7.910568163417,3.30819206127675,0,0.438450885253763,8.68163301400032,5.9030527684197,0,0.6196469961995,1.40847801266121,1.14729081763241,0.589494246078727,0,2.12856638442359,4.01104507065562,6.91519275215794,1.13841952129715,10.8479763275945,4.13755084719702,2.01090682660736,3.26672954583968,2.2594512186427,3.01353760869861,8.42357378338128,2.21715076768338,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.96255619048879,0,0,0,0,0,0,0,0.562677665642051,0,0,0.63337622438398,1.79323189425963,3.86797481743607,0,0,0,0,0,0,0,6.11589114948988,0,0,1.93866549219044,0.834912883456661,0,0,0,14.4999915086959,0,0,0,0,0,0.520874984799877,0,0.120596438625408,3.05163472634166,0.995213339381022,0.886642856860642,0.438770794307945,0,0,5.2326175782582,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.6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| |phase1_expression=9.6289541013395,2.99740733447376,4.79244973926302,1.0007329835313,5.36353313312745,0.872338524100369,0,2.52687949370732,4.17897005119742,2.21160542851358,0.697801167972428,0.873765488520689,1.31883489114227,1.36142988256051,0.662794751455832,0,0,0,0,0.738726348460727,1.22400414746552,0,0,0,0,0,0,0,0,0,0,2.75826367343678,6.32532429434325,1.10926203050036,0,0,0,0,0,0,1.34349284543955,1.94336199611388,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,3.35350429851818,2.55725123687061,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0.756278537312543,0.443458794925128,0.43917392846563,2.42311289670768,3.27865759463288,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.06729878806013,0,0.402829317109147,0.760272105718513,1.22031028774085,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,3.48875241714027,1.98788780678127,0.12663051166458,0.132409180813219,1.14734648299525,0.709336764396714,1.12135520028461,0,0,4.04574346019696,1.75123873690594,4.57693328717684,3.32986340818849,0.576175924479999,1.17160715916898,1.5608003841516,1.71141546463335,0.747243402759005,0.23486899728753,0,0.140450806702248,0,1.71968044236475,0,0,0.494533858557114,3.64064544775211,12.2165084108761,0.673344455816265,1.25118519871964,0,0,0.30648779579902,1.80285670687916,2.04177929688038,0,0.213557388818567,0.635795703478686,0,0.103052529238439,0.257640540045629,1.11670113798954,0.168776332241266,0.389748020644795,0,0.460249493211497,1.45481451136931,0,0.302256294682921,0.169560592310488,5.9910864480622,8.45512973831587,3.44165514466805,0.731842236777572,0.927708378250397,0.69716365721711,0.621966330092223,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,4.5273141246454,8.82052268313252,0,0,1.18157981336281,0,0,1.71567810298526,2.41450627898976,0,0,2.87024179991442,3.9096996637239,4.15973914111831,0,0.811512834825538,0.587043471179108,0.433099343283221,0.925971025153221,0.190254152234598,0,0,0,0,0,5.62403003920662,4.70349958956807,3.1190521393325,0,0,0.383382679165211,0,0,0,0.288239906833923,0.12624243342638,7.42925363218378,19.4814097034722,29.3043618025117,15.3965201420435,6.78661451841935,5.1058319833466,9.71809870943966,1.12131084345361,0,0.80672114403045,0.258543431515556,28.6125156681506,0,0.797814349754612,0,0,0,1.0656887160644,5.43316375900961,4.88359444852299,4.93944202068461,1.62868092146868,5.68627117988073,0.791951872933429,0,0,0,0,0,0,0.958499421966331,0,2.85273810081437,0.144781306667579,0.410952645100767,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,1.96306386750624,1.00034104211935,1.89885516589815,0,0,0,0,4.51419149591578,13.6444502433591,3.10419213877515,0,0,0.955719759148911,2.93701736194111,2.40200396667599,0,0,0,0,0,0,9.6762045049323,2.91577749247319,4.77122160536225,11.148105985246,5.11707249066703,1.28683136914886,5.93672265779964,0,1.77561725313127,1.06765302817952,1.03850885836724,0.697262270759755,0,2.80709058424599,0.276242966807689,1.83703117063371,2.00300284807389,5.76947425821466,1.35359883872224,0.924184045252977,0,1.46139224653261,0.422206515571503,0,0.170093705276516,0.215915916102139,1.54227252690289,0.812839312631559,2.00675909541941,0.764628819135115,0.831076008928724,1.11937377361089,0,0,0.512900250232778,0,0,1.64865618636356,0,0,13.7823729119081,5.20048196829217,3.21367859688319,2.22342652071881,1.07834031980251,1.5350367472613,0.964856007391714,4.51165028446749,3.0453505721988,1.61930592090592,0.267096106940212,2.80984356113663,4.03599141466723,1.40373983744043,1.51736671283325,0.464845549297286,0,1.3940745403212,0.308033580176089,1.06461206063404,0.869932992075073,0,0,0.744316738719335,1.89827654831236,1.33441135746677,5.11795582622668,1.71175595213568,5.40945521474092,0,5.03642881233281,4.11805544604082,3.65218447271628,0.808729926293264,3.17020642346017,1.68503382495592,7.80213982543345,0.487426979262569,1.05650146756755,2.72999822815972,5.65621727814851,7.910568163417,3.30819206127675,0,0.438450885253763,8.68163301400032,5.9030527684197,0,0.6196469961995,1.40847801266121,1.14729081763241,0.589494246078727,0,2.12856638442359,4.01104507065562,6.91519275215794,1.13841952129715,10.8479763275945,4.13755084719702,2.01090682660736,3.26672954583968,2.2594512186427,3.01353760869861,8.42357378338128,2.21715076768338,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.96255619048879,0,0,0,0,0,0,0,0.562677665642051,0,0,0.63337622438398,1.79323189425963,3.86797481743607,0,0,0,0,0,0,0,6.11589114948988,0,0,1.93866549219044,0.834912883456661,0,0,0,14.4999915086959,0,0,0,0,0,0.520874984799877,0,0.120596438625408,3.05163472634166,0.995213339381022,0.886642856860642,0.438770794307945,0,0,5.2326175782582,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.6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| ||
|short_description=p4@CYGB | |||
}} | }} |
Latest revision as of 15:37, 17 September 2015
Short description: | p4@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYGB_5end |
Coexpression cluster: | C1231_Melanocyte_Mallassezderived_Gingival_Keratinocyte_melanoma_Sebocyte_Mesenchymal |
Association with transcript: | -219bp_to_ENST00000293230, NM_134268, uc002jru.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | Q8WWM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 7.88e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.19e-10 | 83 |
compound organ | 1.89e-10 | 68 |
primary circulatory organ | 1.97e-10 | 27 |
trunk | 2.18e-10 | 199 |
adult organism | 4.70e-09 | 114 |
heart | 1.11e-08 | 24 |
primitive heart tube | 1.11e-08 | 24 |
primary heart field | 1.11e-08 | 24 |
anterior lateral plate mesoderm | 1.11e-08 | 24 |
heart tube | 1.11e-08 | 24 |
heart primordium | 1.11e-08 | 24 |
cardiac mesoderm | 1.11e-08 | 24 |
cardiogenic plate | 1.11e-08 | 24 |
heart rudiment | 1.11e-08 | 24 |
endoderm-derived structure | 2.37e-08 | 160 |
endoderm | 2.37e-08 | 160 |
presumptive endoderm | 2.37e-08 | 160 |
muscle tissue | 2.89e-08 | 64 |
musculature | 2.89e-08 | 64 |
musculature of body | 2.89e-08 | 64 |
epithelium | 7.82e-08 | 306 |
mesenchyme | 7.99e-08 | 160 |
entire embryonic mesenchyme | 7.99e-08 | 160 |
cell layer | 9.22e-08 | 309 |
tracheobronchial tree | 9.53e-08 | 15 |
lower respiratory tract | 9.53e-08 | 15 |
trunk mesenchyme | 1.71e-07 | 122 |
skeletal muscle tissue | 2.12e-07 | 62 |
striated muscle tissue | 2.12e-07 | 62 |
myotome | 2.12e-07 | 62 |
cavity lining | 2.86e-07 | 12 |
serous membrane | 2.86e-07 | 12 |