FFCP PHASE1:Hg19::chr17:74536139..74536146,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=768206 | |EntrezGene=768206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32528 | |HGNC=32528 | ||
|TSSclassifier=strong | |||
|UniProt=Q00LT1 | |UniProt=Q00LT1 | ||
|association_with_transcript=18bp_to_ENST00000397630,NM_001077620,uc002jrx.2_5end | |association_with_transcript=18bp_to_ENST00000397630,NM_001077620,uc002jrx.2_5end | ||
|cluster_id=chr17:74536139..74536146,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_9_at_PRCD_5end | |description=CAGE_peak_9_at_PRCD_5end | ||
|id=chr17:74536139..74536146,+ | |id=chr17:74536139..74536146,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.12e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.02e-57!2;UBERON:0002757!2.02e-57!2;UBERON:0010134!2.02e-57!2;UBERON:0002784!2.02e-57!2;UBERON:0005408!2.02e-57!2;UBERON:0001899!2.02e-57!2;UBERON:0003296!2.37e-29!4;UBERON:0010133!2.37e-29!4;UBERON:0000966!1.61e-23!5;UBERON:0005388!1.61e-23!5;UBERON:0001802!1.61e-23!5;UBERON:0001894!2.90e-17!7;UBERON:0006222!2.90e-17!7;UBERON:0002360!2.37e-15!2;UBERON:0000094!2.37e-15!2;UBERON:0007645!2.37e-15!2;UBERON:0000970!1.69e-13!20;UBERON:0002104!6.85e-13!21;UBERON:0000020!7.80e-12!23;UBERON:0001032!2.27e-11!24;UBERON:0004456!2.27e-11!24;UBERON:0003075!1.84e-08!86;UBERON:0007284!1.84e-08!86;UBERON:0005743!2.27e-08!86;UBERON:0002346!4.21e-08!90;UBERON:0003056!8.30e-08!61;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0000019!6.38e-07!19;UBERON:0000047!6.38e-07!19;UBERON:0004088!6.38e-07!19;UBERON:0003072!6.38e-07!19;UBERON:0003071!6.38e-07!19;UBERON:0004128!6.38e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.55e-98;2!UBERON:0002757;1.55e-98;2!UBERON:0010134;1.55e-98;2!UBERON:0005408;1.55e-98;2!UBERON:0001899;1.55e-98;2!UBERON:0003296;5.14e-50;4!UBERON:0010133;5.14e-50;4!UBERON:0002784;5.14e-50;4!UBERON:0001894;3.65e-29;7!UBERON:0000966;3.60e-11;5!UBERON:0005388;3.60e-11;5!UBERON:0001802;3.60e-11;5!UBERON:0000970;5.70e-11;20!UBERON:0002104;1.69e-10;21!UBERON:0000020;1.12e-09;23!UBERON:0001032;2.56e-09;24!UBERON:0004456;2.56e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.55e-98,2;UBERON:0002757,1.55e-98,2;UBERON:0010134,1.55e-98,2;UBERON:0005408,1.55e-98,2;UBERON:0001899,1.55e-98,2;UBERON:0003296,5.14e-50,4;UBERON:0010133,5.14e-50,4;UBERON:0002784,5.14e-50,4;UBERON:0001894,3.65e-29,7;UBERON:0006222,3.65e-29,7;UBERON:0000970,1.69e-10,21;UBERON:0002104,1.69e-10,21;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0000020,2.56e-09,24;UBERON:0001032,2.56e-09,24;UBERON:0004456,2.56e-09,24;UBERON:0003056,4.61e-08,61 | |||
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|short_description=p9@PRCD | |short_description=p9@PRCD | ||
}} | }} |
Latest revision as of 15:39, 17 September 2015
Short description: | p9@PRCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRCD_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 18bp_to_ENST00000397630, NM_001077620, uc002jrx.2_5end |
EntrezGene: | PRCD |
HGNC: | 32528 |
UniProt: | Q00LT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.55e-98 | 2 |
regional part of epithalamus | 1.55e-98 | 2 |
secretory circumventricular organ | 1.55e-98 | 2 |
circumventricular organ | 1.55e-98 | 2 |
epithalamus | 1.55e-98 | 2 |
gland of diencephalon | 5.14e-50 | 4 |
neuroendocrine gland | 5.14e-50 | 4 |
regional part of diencephalon | 5.14e-50 | 4 |
diencephalon | 3.65e-29 | 7 |
future diencephalon | 3.65e-29 | 7 |
eye | 1.69e-10 | 21 |
visual system | 1.69e-10 | 21 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
sense organ | 2.56e-09 | 24 |
sensory system | 2.56e-09 | 24 |
entire sense organ system | 2.56e-09 | 24 |
pre-chordal neural plate | 4.61e-08 | 61 |