FFCP PHASE1:Hg19::chr20:68295..68305,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=245938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18105 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N687 | |||
|association_with_transcript=-45bp_to_ENST00000382410,NM_153325,uc002wcw.2_5end | |||
|cluster_id=chr20:68295..68305,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_2_at_DEFB125_5end | |||
|id=chr20:68295..68305,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2!UBERON:0009117;6.56e-08;10!UBERON:0005564;6.56e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.71e-66!3;UBERON:0004054!1.71e-66!3;UBERON:0001301!1.46e-50!1;UBERON:0001000!2.42e-50!1;UBERON:0005352!2.42e-50!1;UBERON:0005904!3.11e-50!4;UBERON:0003135!4.07e-41!11;UBERON:0003101!1.49e-36!22;UBERON:0000079!1.49e-36!22;UBERON:0005156!2.92e-14!59;UBERON:0000990!2.92e-14!59;UBERON:0003133!3.32e-10!48;UBERON:0004175!5.06e-09!25;UBERON:0000058!1.03e-08!26;UBERON:0007023!1.02e-07!115;UBERON:0000473!1.69e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.24e-88;3!UBERON:0004054;6.24e-88;3!UBERON:0001301;1.23e-66;1!UBERON:0001000;2.39e-66;1!UBERON:0005352;2.39e-66;1!UBERON:0005904;2.40e-66;4!UBERON:0003135;2.16e-54;11!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0000058;2.08e-27;10!UBERON:0004175;1.02e-13;21!UBERON:0003133;1.51e-10;44!UBERON:0000473;1.47e-09;8!UBERON:0005156;9.97e-08;59!UBERON:0000990;9.97e-08;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.24e-88,3;UBERON:0004054,6.24e-88,3;UBERON:0001301,1.23e-66,1;UBERON:0001000,2.39e-66,1;UBERON:0005352,2.39e-66,1;UBERON:0005904,2.40e-66,4;UBERON:0003135,2.16e-54,11;UBERON:0003101,7.08e-28,22;UBERON:0000079,7.08e-28,22;UBERON:0000058,4.91e-15,19;UBERON:0003133,2.00e-13,48;UBERON:0004175,1.03e-11,25;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0005103,1.24e-09,8;UBERON:0000083,1.24e-09,8;UBERON:0009201,1.24e-09,8;UBERON:0006553,1.24e-09,8;UBERON:0003074,1.24e-09,8;UBERON:0003060,1.24e-09,8;UBERON:0000473,1.47e-09,8;UBERON:0000080,1.04e-08,9;UBERON:0002120,1.04e-08,9;UBERON:0004875,1.04e-08,9;UBERON:0005721,1.04e-08,9;UBERON:0005754,1.04e-08,9;UBERON:0007297,1.04e-08,9;UBERON:0004876,2.32e-07,11;UBERON:0003887,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12959723704208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1497069565335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59135266258303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@DEFB125 | |||
}} |
Latest revision as of 16:05, 17 September 2015
Short description: | p2@DEFB125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DEFB125_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -45bp_to_ENST00000382410, NM_153325, uc002wcw.2_5end |
EntrezGene: | DEFB125 |
HGNC: | 18105 |
UniProt: | Q8N687 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.24e-88 | 3 |
internal male genitalia | 6.24e-88 | 3 |
epididymis | 1.23e-66 | 1 |
vas deferens | 2.39e-66 | 1 |
spermatic cord | 2.39e-66 | 1 |
duct of male reproductive system | 2.40e-66 | 4 |
male reproductive organ | 2.16e-54 | 11 |
male organism | 7.08e-28 | 22 |
male reproductive system | 7.08e-28 | 22 |
duct | 4.91e-15 | 19 |
reproductive organ | 2.00e-13 | 48 |
internal genitalia | 1.03e-11 | 25 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
mesonephric epithelium | 1.24e-09 | 8 |
mesonephric tubule | 1.24e-09 | 8 |
nephric duct | 1.24e-09 | 8 |
renal duct | 1.24e-09 | 8 |
mesonephric duct | 1.24e-09 | 8 |
pronephric duct | 1.24e-09 | 8 |
testis | 1.47e-09 | 8 |
mesonephros | 1.04e-08 | 9 |
pronephros | 1.04e-08 | 9 |
nephrogenic cord | 1.04e-08 | 9 |
pronephric mesoderm | 1.04e-08 | 9 |
rostral part of nephrogenic cord | 1.04e-08 | 9 |
presumptive pronephric mesoderm | 1.04e-08 | 9 |
urogenital ridge | 2.32e-07 | 11 |
intraembryonic coelom | 7.48e-07 | 12 |