FFCP PHASE1:Hg19::chr13:49550933..49550944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22862 | |EntrezGene=22862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20296 | |HGNC=20296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000337156,uc001vcn.2,uc001vco.2_5end | |association_with_transcript=0bp_to_ENST00000337156,uc001vcn.2,uc001vco.2_5end | ||
|cluster_id=chr13:49550933..49550944,+ | |||
|coexpression_cluster_id=C1708 | |||
|description=CAGE_peak_7_at_FNDC3A_5end | |description=CAGE_peak_7_at_FNDC3A_5end | ||
|id=chr13:49550933..49550944,+ | |id=chr13:49550933..49550944,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.10e-22!45;CL:0002057!1.08e-20!42;CL:0000557!1.82e-17!71;CL:0002009!2.81e-17!65;CL:0000839!1.92e-16!70;CL:0000766!2.79e-16!76;CL:0002194!3.55e-16!63;CL:0000576!3.55e-16!63;CL:0000040!3.55e-16!63;CL:0000559!3.55e-16!63;CL:0000738!2.49e-12!140;CL:0002031!5.22e-12!124;CL:0002087!2.48e-11!119;CL:0000763!5.42e-08!112;CL:0000049!5.42e-08!112 | |ontology_enrichment_celltype=CL:0000860!2.10e-22!45;CL:0002057!1.08e-20!42;CL:0000557!1.82e-17!71;CL:0002009!2.81e-17!65;CL:0000839!1.92e-16!70;CL:0000766!2.79e-16!76;CL:0002194!3.55e-16!63;CL:0000576!3.55e-16!63;CL:0000040!3.55e-16!63;CL:0000559!3.55e-16!63;CL:0000738!2.49e-12!140;CL:0002031!5.22e-12!124;CL:0002087!2.48e-11!119;CL:0000763!5.42e-08!112;CL:0000049!5.42e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.61e-36;33!CL:0002057;3.61e-36;33!CL:0000473;4.41e-28;39!CL:0000234;4.41e-28;39!CL:0000576;1.80e-17;48!CL:0000766;5.56e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.17e-33,42;CL:0002057,5.17e-33,42;CL:0000473,1.71e-31,48;CL:0000234,1.71e-31,48;CL:0002009,1.61e-25,61;CL:0000557,3.72e-24,67;CL:0002194,3.58e-23,59;CL:0000576,3.58e-23,59;CL:0000040,3.58e-23,59;CL:0000559,3.58e-23,59;CL:0000839,1.93e-21,66;CL:0000766,3.98e-20,72;CL:0000763,4.76e-12,108;CL:0000049,4.76e-12,108;CL:0002031,1.26e-11,120;CL:0002087,1.29e-10,115;CL:0000738,2.05e-10,136;CL:0002032,8.67e-07,161;CL:0000837,8.67e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-24;42!UBERON:0008947;1.31e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.49e-15!80;UBERON:0001474!4.88e-13!86;UBERON:0002390!4.03e-12!102;UBERON:0003061!4.03e-12!102;UBERON:0004765!1.06e-11!101;UBERON:0001434!1.06e-11!101;UBERON:0002405!1.18e-11!115;UBERON:0000062!2.57e-11!511;UBERON:0002193!1.33e-10!112;UBERON:0007023!2.05e-07!115;UBERON:0001737!4.28e-07!9 | |ontology_enrichment_uberon=UBERON:0002371!4.49e-15!80;UBERON:0001474!4.88e-13!86;UBERON:0002390!4.03e-12!102;UBERON:0003061!4.03e-12!102;UBERON:0004765!1.06e-11!101;UBERON:0001434!1.06e-11!101;UBERON:0002405!1.18e-11!115;UBERON:0000062!2.57e-11!511;UBERON:0002193!1.33e-10!112;UBERON:0007023!2.05e-07!115;UBERON:0001737!4.28e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.82e-15;9!UBERON:0001557;7.82e-15;9!UBERON:0003296;1.49e-08;4!UBERON:0010133;1.49e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-21,76;UBERON:0001474,2.81e-19,82;UBERON:0002405,6.13e-17,93;UBERON:0004765,1.20e-16,90;UBERON:0002390,2.10e-15,98;UBERON:0003061,2.10e-15,98;UBERON:0001737,4.00e-15,9;UBERON:0002193,5.16e-14,108;UBERON:0001434,5.65e-14,100;UBERON:0001557,7.63e-11,19;UBERON:0003296,1.18e-08,4;UBERON:0010133,1.18e-08,4;UBERON:0001041,6.25e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.328402357799783,0.236132343941038,1.18009283054671,0.767658796194425,0.619264493264304,0,0,0,0,0.142169232487422,0,2.21598163412751,1.00272223735071,0.217010870715852,0.223915474239924,0.647787332037959,0.257575567634187,1.59938062657521,2.64513160582167,1.69808842831471,4.41615170120801,10.6903650885675,8.6717783850629,3.16461631554365,3.07392847834921,3.78371567821736,3.7922024881028,10.3277549373412,4.06279459783025,3.01187743268168,7.64137220161968,8.09004544002305,4.28517449319264,7.38136762275015,7.67204550958849,0.989553900560148,2.19410023383795,1.27867425159808,2.90209238628584,0.56738522469114,4.35975574296902,3.26623264833766,3.12889751052121,6.29847649644838,0.605399502633369,5.15588690382591,3.16462387440884,0.633765858935825,0.425208599930087,0.419317291016752,1.57260083605093,0.600707571366025,0.16072558669708,0,0.19891667719909,0,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0,0.590129310341499,0,0.205601498999509,1.17030546773475,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0,0.541607727530031,0.512365278902701,0.520237390239513,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0,0.506039384039006,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.506522046658319,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0.624320153660641,0,0,0,0,0.140450806702248,1.22492502752936,0,0.413303124703062,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.0920498986422993,0.969876340912871,0,0.10075209822764,0,0,0,0.573609190778008,0,0.132529768321485,0.348581828608555,0.10366105501537,0,0,1.56449532329816,0,0,0,0,2.48444280083672,1.68584690078102,2.16909926895134,3.19852520923942,3.92182999366331,2.37270619111097,2.96628877952362,1.56977172100277,3.8474715694639,0,0,0,0,1.26755034821831,0,3.54473944008842,0.441463099414651,0,0.343135620597051,0,1.1240175325762,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.895585227028483,0,0.383382679165211,18.2285398021499,0.528290604079356,0.621984346622316,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.899756920638513,1.2162378064119,1.00451418286425,0,0,0,0,0.579125226670317,0.821905290201534,0.537182889719687,0.112085143993527,0,0.431255149719035,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0,0,0,0.828831026872071,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.585707074963566,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,1.07857100409308,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,9.06760902499956,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0.421258456238981,0,0,0,0.409499734223957,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,8.84951727301724,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0.640276590135727,0.318852545457645,0,0.383010740264733,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,2.86493381685228,0.593929361665277,2.45728561679386,0,0.140669416410513,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0.409074730008619,2.09244169283818,0,0,0.537063524026827,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.437299999980979,0,0.341380344856499,0,0,0.344743373241465,0,0.347249989866585,1.77148277162768,0.844175070377856,0,0.110579259931225,0,0.219385397153973,3.81284622316466,0.139423744278603,0.230850775511391,0.113942055847001,0,0.269272933229316,0.434589487688032,1.91400695839152,0.824378340616761,2.66517388009317,0,0,0,0,0,0,0,0,0,0.489698424477443,0.282706142867882,2.16388639742091,0,1.32686346755009,0,0.593042257361244,0,0,0,0,0.702793337176017,0,0,0,6.70793484843964,2.41981432097328,0,0.379119477770928,2.25485129121739,0.311064574191741,0,0,0,0,0,0,0,0.0979923974143777,0,2.62090002363045,0.171986032471617,1.16107597546902,4.5315376593435,1.2317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| ||
|short_description=p7@FNDC3A | |short_description=p7@FNDC3A | ||
}} | }} |
Latest revision as of 16:29, 17 September 2015
Short description: | p7@FNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FNDC3A_5end |
Coexpression cluster: | C1708_Mast_placenta_CD14_small_pituitary_non_parotid |
Association with transcript: | 0bp_to_ENST00000337156, uc001vcn.2, uc001vco.2_5end |
EntrezGene: | FNDC3A |
HGNC: | 20296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.17e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.17e-33 | 42 |
defensive cell | 1.71e-31 | 48 |
phagocyte | 1.71e-31 | 48 |
macrophage dendritic cell progenitor | 1.61e-25 | 61 |
granulocyte monocyte progenitor cell | 3.72e-24 | 67 |
monopoietic cell | 3.58e-23 | 59 |
monocyte | 3.58e-23 | 59 |
monoblast | 3.58e-23 | 59 |
promonocyte | 3.58e-23 | 59 |
myeloid lineage restricted progenitor cell | 1.93e-21 | 66 |
myeloid leukocyte | 3.98e-20 | 72 |
myeloid cell | 4.76e-12 | 108 |
common myeloid progenitor | 4.76e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 1.26e-11 | 120 |
nongranular leukocyte | 1.29e-10 | 115 |
leukocyte | 2.05e-10 | 136 |
hematopoietic oligopotent progenitor cell | 8.67e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.67e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-21 | 76 |
bone element | 2.81e-19 | 82 |
immune system | 6.13e-17 | 93 |
skeletal element | 1.20e-16 | 90 |
hematopoietic system | 2.10e-15 | 98 |
blood island | 2.10e-15 | 98 |
larynx | 4.00e-15 | 9 |
hemolymphoid system | 5.16e-14 | 108 |
skeletal system | 5.65e-14 | 100 |
upper respiratory tract | 7.63e-11 | 19 |
gland of diencephalon | 1.18e-08 | 4 |
neuroendocrine gland | 1.18e-08 | 4 |
foregut | 6.25e-07 | 87 |