FFCP PHASE1:Hg19::chr9:71735882..71735896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9414 | |EntrezGene=9414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11828 | |HGNC=11828 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z2R3 | |UniProt=B7Z2R3 | ||
|association_with_transcript=-283bp_to_NM_001170414_5end | |association_with_transcript=-283bp_to_NM_001170414_5end | ||
|cluster_id=chr9:71735882..71735896,+ | |||
|coexpression_cluster_id=C4826 | |||
|description=CAGE_peak_6_at_TJP2_5end | |description=CAGE_peak_6_at_TJP2_5end | ||
|id=chr9:71735882..71735896,+ | |id=chr9:71735882..71735896,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.15e-16!12;CL:1000494!1.15e-16!12;CL:0000066!2.61e-15!254;CL:1000449!7.47e-12!16;CL:1000497!2.95e-10!18;CL:0002518!2.95e-10!18;CL:0000039!3.07e-10!7;CL:0000586!3.07e-10!7;CL:0002322!3.76e-09!5;CL:0000239!1.01e-07!3;CL:1000615!1.01e-07!3;CL:0002306!1.01e-07!3;CL:0002681!2.78e-07!13;CL:0002584!2.78e-07!13 | |ontology_enrichment_celltype=CL:1000507!1.15e-16!12;CL:1000494!1.15e-16!12;CL:0000066!2.61e-15!254;CL:1000449!7.47e-12!16;CL:1000497!2.95e-10!18;CL:0002518!2.95e-10!18;CL:0000039!3.07e-10!7;CL:0000586!3.07e-10!7;CL:0002322!3.76e-09!5;CL:0000239!1.01e-07!3;CL:1000615!1.01e-07!3;CL:0002306!1.01e-07!3;CL:0002681!2.78e-07!13;CL:0002584!2.78e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.36e-41;10!CL:1000494;3.36e-41;10!CL:1000449;5.84e-27;15!CL:1000497;1.32e-23;17!CL:0002518;1.32e-23;17!CL:0000239;5.26e-17;3!CL:1000615;5.26e-17;3!CL:0002306;5.26e-17;3!CL:0002681;2.48e-15;12!CL:0002584;2.48e-15;12!CL:0000039;8.61e-12;7!CL:0000586;8.61e-12;7!CL:0000182;2.25e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.66e-41,10;CL:1000494,2.66e-41,10;CL:1000449,5.01e-27,15;CL:1000497,1.15e-23,17;CL:0002518,1.15e-23,17;CL:0000239,4.73e-17,3;CL:1000615,4.73e-17,3;CL:0002306,4.73e-17,3;CL:0002681,2.27e-15,12;CL:0002584,2.27e-15,12;CL:0000039,8.74e-12,7;CL:0000586,8.74e-12,7;CL:0000066,2.56e-08,253;CL:0000182,2.35e-07,12;CL:0000223,3.05e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.00e-17;10!UBERON:0005564;1.00e-17;10!UBERON:0003104;3.70e-12;31!UBERON:0004161;6.85e-12;11!UBERON:0009497;5.08e-10;13 | |||
|ontology_enrichment_disease=DOID:305!1.28e-14!106;DOID:0050687!1.57e-10!143;DOID:299!8.84e-08!25 | |ontology_enrichment_disease=DOID:305!1.28e-14!106;DOID:0050687!1.57e-10!143;DOID:299!8.84e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.23e-11;2!DOID:299;3.38e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.49e-11,2;DOID:299,3.12e-09,25;DOID:305,8.93e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.15e-16!12;UBERON:0001231!1.15e-16!12;UBERON:0004810!1.15e-16!12;UBERON:0000466!3.08e-13!126;UBERON:0006554!3.94e-13!44;UBERON:0006555!3.96e-13!17;UBERON:0005103!3.96e-13!17;UBERON:0000083!3.96e-13!17;UBERON:0009201!3.96e-13!17;UBERON:0004819!3.96e-13!17;UBERON:0006553!3.96e-13!17;UBERON:0003074!3.96e-13!17;UBERON:0003060!3.96e-13!17;UBERON:0003064!6.43e-13!37;UBERON:0001008!1.03e-12!45;UBERON:0000080!3.07e-12!18;UBERON:0002120!3.07e-12!18;UBERON:0004875!3.07e-12!18;UBERON:0005721!3.07e-12!18;UBERON:0005754!3.07e-12!18;UBERON:0007297!3.07e-12!18;UBERON:0003886!3.50e-12!63;UBERON:0004211!7.47e-12!16;UBERON:0001285!7.47e-12!16;UBERON:0007684!7.47e-12!16;UBERON:0003220!7.47e-12!16;UBERON:0004208!7.47e-12!16;UBERON:0003887!8.54e-12!21;UBERON:0002553!2.19e-11!70;UBERON:0005172!2.32e-11!55;UBERON:0005173!2.32e-11!55;UBERON:0004921!3.78e-11!129;UBERON:0004185!3.78e-11!129;UBERON:0000489!4.14e-11!32;UBERON:0004876!9.86e-11!20;UBERON:0000464!1.47e-10!104;UBERON:0002113!1.54e-10!27;UBERON:0003918!1.54e-10!27;UBERON:0005095!1.54e-10!27;UBERON:0007687!1.54e-10!27;UBERON:0003101!2.98e-10!22;UBERON:0000079!2.98e-10!22;UBERON:0005177!3.22e-10!107;UBERON:0001046!5.97e-10!19;UBERON:0001007!1.08e-09!155;UBERON:0001555!1.08e-09!155;UBERON:0007026!1.08e-09!155;UBERON:0002417!1.13e-09!61;UBERON:0000916!1.13e-09!61;UBERON:0005409!2.21e-09!35;UBERON:0000473!3.51e-09!8;UBERON:0000058!4.51e-09!26;UBERON:0003135!2.13e-08!11;UBERON:0000160!2.26e-08!27;UBERON:0004119!4.48e-08!169;UBERON:0000925!4.48e-08!169;UBERON:0006595!4.48e-08!169;UBERON:0006853!1.01e-07!3;UBERON:0007685!1.01e-07!3;UBERON:0004134!1.01e-07!3;UBERON:0001225!2.78e-07!13;UBERON:0008987!2.78e-07!13;UBERON:0004907!4.12e-07!5;UBERON:0000077!4.35e-07!130 | |ontology_enrichment_uberon=UBERON:0009773!1.15e-16!12;UBERON:0001231!1.15e-16!12;UBERON:0004810!1.15e-16!12;UBERON:0000466!3.08e-13!126;UBERON:0006554!3.94e-13!44;UBERON:0006555!3.96e-13!17;UBERON:0005103!3.96e-13!17;UBERON:0000083!3.96e-13!17;UBERON:0009201!3.96e-13!17;UBERON:0004819!3.96e-13!17;UBERON:0006553!3.96e-13!17;UBERON:0003074!3.96e-13!17;UBERON:0003060!3.96e-13!17;UBERON:0003064!6.43e-13!37;UBERON:0001008!1.03e-12!45;UBERON:0000080!3.07e-12!18;UBERON:0002120!3.07e-12!18;UBERON:0004875!3.07e-12!18;UBERON:0005721!3.07e-12!18;UBERON:0005754!3.07e-12!18;UBERON:0007297!3.07e-12!18;UBERON:0003886!3.50e-12!63;UBERON:0004211!7.47e-12!16;UBERON:0001285!7.47e-12!16;UBERON:0007684!7.47e-12!16;UBERON:0003220!7.47e-12!16;UBERON:0004208!7.47e-12!16;UBERON:0003887!8.54e-12!21;UBERON:0002553!2.19e-11!70;UBERON:0005172!2.32e-11!55;UBERON:0005173!2.32e-11!55;UBERON:0004921!3.78e-11!129;UBERON:0004185!3.78e-11!129;UBERON:0000489!4.14e-11!32;UBERON:0004876!9.86e-11!20;UBERON:0000464!1.47e-10!104;UBERON:0002113!1.54e-10!27;UBERON:0003918!1.54e-10!27;UBERON:0005095!1.54e-10!27;UBERON:0007687!1.54e-10!27;UBERON:0003101!2.98e-10!22;UBERON:0000079!2.98e-10!22;UBERON:0005177!3.22e-10!107;UBERON:0001046!5.97e-10!19;UBERON:0001007!1.08e-09!155;UBERON:0001555!1.08e-09!155;UBERON:0007026!1.08e-09!155;UBERON:0002417!1.13e-09!61;UBERON:0000916!1.13e-09!61;UBERON:0005409!2.21e-09!35;UBERON:0000473!3.51e-09!8;UBERON:0000058!4.51e-09!26;UBERON:0003135!2.13e-08!11;UBERON:0000160!2.26e-08!27;UBERON:0004119!4.48e-08!169;UBERON:0000925!4.48e-08!169;UBERON:0006595!4.48e-08!169;UBERON:0006853!1.01e-07!3;UBERON:0007685!1.01e-07!3;UBERON:0004134!1.01e-07!3;UBERON:0001225!2.78e-07!13;UBERON:0008987!2.78e-07!13;UBERON:0004907!4.12e-07!5;UBERON:0000077!4.35e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.36e-41;10!UBERON:0009773;3.36e-41;10!UBERON:0001231;3.36e-41;10!UBERON:0004810;3.36e-41;10!UBERON:0006555;5.84e-27;15!UBERON:0004819;5.84e-27;15!UBERON:0001285;5.84e-27;15!UBERON:0007684;5.84e-27;15!UBERON:0002113;1.80e-24;24!UBERON:0011143;1.80e-24;24!UBERON:0000160;7.31e-22;17!UBERON:0005409;1.35e-20;22!UBERON:0000489;7.10e-20;29!UBERON:0006554;3.86e-19;30!UBERON:0001008;3.86e-19;30!UBERON:0006853;5.26e-17;3!UBERON:0007685;5.26e-17;3!UBERON:0004134;5.26e-17;3!UBERON:0000473;1.47e-15;8!UBERON:0001225;2.48e-15;12!UBERON:0008987;2.48e-15;12!UBERON:0005172;1.01e-14;52!UBERON:0005173;1.01e-14;52!UBERON:0001851;3.79e-12;15!UBERON:0000353;3.79e-12;15!UBERON:0004921;4.93e-12;33!UBERON:0000059;2.39e-11;11!UBERON:0003135;2.92e-11;11!UBERON:0002108;3.21e-10;4!UBERON:0004907;1.13e-09;5!UBERON:0002417;2.03e-09;58!UBERON:0000916;2.03e-09;58!UBERON:0001155;3.24e-09;9!UBERON:0000991;3.76e-08;21!UBERON:0003101;8.90e-08;22!UBERON:0000079;8.90e-08;22!UBERON:0002107;9.17e-07;19!UBERON:0006925;9.17e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.66e-41,10;UBERON:0004211,5.01e-27,15;UBERON:0009773,5.01e-27,15;UBERON:0001231,5.01e-27,15;UBERON:0001285,5.01e-27,15;UBERON:0007684,5.01e-27,15;UBERON:0004208,5.01e-27,15;UBERON:0006555,3.06e-25,16;UBERON:0004819,3.06e-25,16;UBERON:0002113,1.80e-22,26;UBERON:0003918,1.80e-22,26;UBERON:0011143,1.80e-22,26;UBERON:0005095,1.80e-22,26;UBERON:0007687,1.80e-22,26;UBERON:0000160,8.19e-22,17;UBERON:0005172,1.82e-21,54;UBERON:0005173,1.82e-21,54;UBERON:0002417,5.79e-19,60;UBERON:0000916,5.79e-19,60;UBERON:0000489,1.71e-18,31;UBERON:0005409,5.33e-18,25;UBERON:0006853,4.73e-17,3;UBERON:0007685,4.73e-17,3;UBERON:0004134,4.73e-17,3;UBERON:0000473,1.48e-15,8;UBERON:0001225,2.27e-15,12;UBERON:0008987,2.27e-15,12;UBERON:0006554,9.13e-14,47;UBERON:0001008,1.99e-13,48;UBERON:0001851,3.54e-12,15;UBERON:0000353,3.54e-12,15;UBERON:0000059,2.61e-11,11;UBERON:0003135,2.92e-11,11;UBERON:0005177,3.00e-11,101;UBERON:0002108,3.32e-10,4;UBERON:0004907,1.24e-09,5;UBERON:0001155,3.65e-09,9;UBERON:0003104,1.21e-08,160;UBERON:0009142,1.21e-08,160;UBERON:0009569,1.49e-08,112;UBERON:0000991,3.76e-08,21;UBERON:0009196,3.76e-08,21;UBERON:0009117,3.76e-08,21;UBERON:0005564,3.76e-08,21;UBERON:0003101,8.79e-08,22;UBERON:0000079,8.79e-08,22;UBERON:0004176,9.37e-08,22;UBERON:0004921,1.05e-07,118;UBERON:0009854,1.35e-07,23;UBERON:0003103,2.81e-07,68;UBERON:0002107,9.65e-07,19;UBERON:0006925,9.65e-07,19;UBERON:0008836,9.65e-07,19 | |||
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|short_description=p6@TJP2 | |short_description=p6@TJP2 | ||
}} | }} |
Latest revision as of 16:39, 17 September 2015
Short description: | p6@TJP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TJP2_5end |
Coexpression cluster: | C4826_hepatocellular_Renal_kidney_adenocarcinoma_Intestinal_small_Prostate |
Association with transcript: | -283bp_to_NM_001170414_5end |
EntrezGene: | TJP2 |
HGNC: | 11828 |
UniProt: | B7Z2R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.66e-41 | 10 |
nephron tubule epithelial cell | 2.66e-41 | 10 |
epithelial cell of nephron | 5.01e-27 | 15 |
kidney cell | 1.15e-23 | 17 |
kidney epithelial cell | 1.15e-23 | 17 |
brush border epithelial cell | 4.73e-17 | 3 |
kidney cortex tubule cell | 4.73e-17 | 3 |
epithelial cell of proximal tubule | 4.73e-17 | 3 |
kidney cortical cell | 2.27e-15 | 12 |
renal cortical epithelial cell | 2.27e-15 | 12 |
germ line cell | 8.74e-12 | 7 |
germ cell | 8.74e-12 | 7 |
epithelial cell | 2.56e-08 | 253 |
hepatocyte | 2.35e-07 | 12 |
endodermal cell | 3.05e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.49e-11 | 2 |
adenocarcinoma | 3.12e-09 | 25 |
carcinoma | 8.93e-08 | 106 |