FFCP PHASE1:Hg19::chr3:197677089..197677100,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6165 | |EntrezGene=6165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10345 | |HGNC=10345 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003fys.2_5end | |association_with_transcript=0bp_to_uc003fys.2_5end | ||
|cluster_id=chr3:197677089..197677100,+ | |||
|coexpression_cluster_id=C3538 | |||
|description=CAGE_peak_2_at_RPL35A_5end | |description=CAGE_peak_2_at_RPL35A_5end | ||
|id=chr3:197677089..197677100,+ | |id=chr3:197677089..197677100,+ | ||
|ontology_enrichment_celltype=CL:0000548!9.81e-35!679;CL:0000004!9.81e-35!679;CL:0000255!9.81e-35!679;CL:0000012!4.93e-34!682;CL:0002321!9.99e-27!248;CL:0000220!6.46e-26!246;CL:0000144!4.13e-20!625;CL:0000003!1.13e-17!722;CL:0000066!1.27e-17!254;CL:0000222!2.14e-16!119;CL:0000055!1.05e-15!180;CL:0002371!5.53e-14!591;CL:0000393!4.07e-13!60;CL:0000211!4.07e-13!60;CL:0000680!2.12e-11!57;CL:0000056!2.12e-11!57;CL:0000355!2.12e-11!57;CL:0000183!7.85e-11!59;CL:0000187!8.74e-11!54;CL:0000063!1.03e-09!578;CL:0000076!3.51e-08!62;CL:0000192!6.63e-08!42;CL:0000514!6.63e-08!42 | |ontology_enrichment_celltype=CL:0000548!9.81e-35!679;CL:0000004!9.81e-35!679;CL:0000255!9.81e-35!679;CL:0000012!4.93e-34!682;CL:0002321!9.99e-27!248;CL:0000220!6.46e-26!246;CL:0000144!4.13e-20!625;CL:0000003!1.13e-17!722;CL:0000066!1.27e-17!254;CL:0000222!2.14e-16!119;CL:0000055!1.05e-15!180;CL:0002371!5.53e-14!591;CL:0000393!4.07e-13!60;CL:0000211!4.07e-13!60;CL:0000680!2.12e-11!57;CL:0000056!2.12e-11!57;CL:0000355!2.12e-11!57;CL:0000183!7.85e-11!59;CL:0000187!8.74e-11!54;CL:0000063!1.03e-09!578;CL:0000076!3.51e-08!62;CL:0000192!6.63e-08!42;CL:0000514!6.63e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000187;3.46e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.12e-27,250;CL:0000066,5.63e-18,253;CL:0000222,2.37e-16,121;CL:0000393,1.07e-12,61;CL:0000211,1.07e-12,61;CL:0000680,5.21e-11,58;CL:0000056,5.21e-11,58;CL:0000355,5.21e-11,58;CL:0000187,2.14e-10,55;CL:0000076,4.99e-08,63;CL:0000192,1.53e-07,43;CL:0000514,1.53e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000355;5.43e-07;58 | |||
|ontology_enrichment_disease=DOID:162!5.28e-20!235;DOID:14566!9.61e-20!239;DOID:0050687!5.09e-11!143;DOID:305!3.18e-10!106;DOID:0050686!1.81e-09!137 | |ontology_enrichment_disease=DOID:162!5.28e-20!235;DOID:14566!9.61e-20!239;DOID:0050687!5.09e-11!143;DOID:305!3.18e-10!106;DOID:0050686!1.81e-09!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.69e-20,235;DOID:14566,8.55e-20,239;DOID:0050687,4.77e-11,143;DOID:305,2.70e-10,106;DOID:0050686,1.73e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.68e-11!83;UBERON:0002329!3.68e-11!83;UBERON:0003077!3.68e-11!83;UBERON:0003059!3.68e-11!83;UBERON:0007282!3.68e-11!83;UBERON:0009618!3.68e-11!83;UBERON:0007285!3.68e-11!83;UBERON:0000490!4.05e-11!138;UBERON:0004290!4.10e-11!70;UBERON:0005256!1.26e-10!143;UBERON:0000486!2.98e-10!82;UBERON:0002100!1.35e-09!216;UBERON:0001134!1.46e-09!61;UBERON:0002036!1.46e-09!61;UBERON:0003082!1.46e-09!61;UBERON:0003104!2.07e-09!238;UBERON:0009142!2.07e-09!238;UBERON:0002049!8.75e-09!79;UBERON:0007798!8.75e-09!79;UBERON:0003914!9.10e-09!118;UBERON:0002385!2.21e-08!63;UBERON:0001015!2.21e-08!63;UBERON:0000383!2.21e-08!63;UBERON:0004872!7.49e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.78e-12,148;UBERON:0007503,1.16e-11,78;UBERON:0002329,8.79e-11,71;UBERON:0003059,8.79e-11,71;UBERON:0007282,8.79e-11,71;UBERON:0004290,8.79e-11,71;UBERON:0009618,8.79e-11,71;UBERON:0007524,1.75e-10,73;UBERON:0003077,2.39e-10,72;UBERON:0007285,2.39e-10,72;UBERON:0000486,5.68e-10,83;UBERON:0002100,8.49e-10,199;UBERON:0005256,1.08e-09,122;UBERON:0001134,3.11e-09,62;UBERON:0002036,3.11e-09,62;UBERON:0003082,3.11e-09,62;UBERON:0003104,3.98e-09,160;UBERON:0009142,3.98e-09,160;UBERON:0003914,5.24e-09,117;UBERON:0002049,6.45e-09,78;UBERON:0007798,6.45e-09,78;UBERON:0002385,4.67e-08,64;UBERON:0001015,4.67e-08,64;UBERON:0000383,4.67e-08,64;UBERON:0004872,6.14e-07,83 | |||
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| ||
|short_description=p2@RPL35A | |short_description=p2@RPL35A | ||
}} | }} |
Latest revision as of 17:42, 17 September 2015
Short description: | p2@RPL35A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL35A_5end |
Coexpression cluster: | C3538_iPS_Mallassezderived_Bronchial_HES3GFP_acute_chronic_hepatocellular |
Association with transcript: | 0bp_to_uc003fys.2_5end |
EntrezGene: | RPL35A |
HGNC: | 10345 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.12e-27 | 250 |
epithelial cell | 5.63e-18 | 253 |
mesodermal cell | 2.37e-16 | 121 |
electrically responsive cell | 1.07e-12 | 61 |
electrically active cell | 1.07e-12 | 61 |
muscle precursor cell | 5.21e-11 | 58 |
myoblast | 5.21e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.21e-11 | 58 |
muscle cell | 2.14e-10 | 55 |
squamous epithelial cell | 4.99e-08 | 63 |
smooth muscle cell | 1.53e-07 | 43 |
smooth muscle myoblast | 1.53e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 1.78e-12 | 148 |
epithelial vesicle | 1.16e-11 | 78 |
somite | 8.79e-11 | 71 |
presomitic mesoderm | 8.79e-11 | 71 |
presumptive segmental plate | 8.79e-11 | 71 |
dermomyotome | 8.79e-11 | 71 |
trunk paraxial mesoderm | 8.79e-11 | 71 |
dense mesenchyme tissue | 1.75e-10 | 73 |
paraxial mesoderm | 2.39e-10 | 72 |
presumptive paraxial mesoderm | 2.39e-10 | 72 |
multilaminar epithelium | 5.68e-10 | 83 |
trunk | 8.49e-10 | 199 |
trunk mesenchyme | 1.08e-09 | 122 |
skeletal muscle tissue | 3.11e-09 | 62 |
striated muscle tissue | 3.11e-09 | 62 |
myotome | 3.11e-09 | 62 |
mesenchyme | 3.98e-09 | 160 |
entire embryonic mesenchyme | 3.98e-09 | 160 |
epithelial tube | 5.24e-09 | 117 |
vasculature | 6.45e-09 | 78 |
vascular system | 6.45e-09 | 78 |
muscle tissue | 4.67e-08 | 64 |
musculature | 4.67e-08 | 64 |
musculature of body | 4.67e-08 | 64 |
splanchnic layer of lateral plate mesoderm | 6.14e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.69e-20 | 235 |
disease of cellular proliferation | 8.55e-20 | 239 |
cell type cancer | 4.77e-11 | 143 |
carcinoma | 2.70e-10 | 106 |
organ system cancer | 1.73e-09 | 137 |