FFCP PHASE1:Hg19::chr1:35220613..35220718,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:35220613..35220718,+
|short_description=p1@GJB5
|description=CAGE_peak_1_at_GJB5_5end
|association_with_transcript=0bp_to_ENST00000338513_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2709 | |EntrezGene=2709 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4287 | |HGNC=4287 | ||
|TSSclassifier=strong | |||
|UniProt=O95377 | |UniProt=O95377 | ||
|association_with_transcript=0bp_to_ENST00000338513_5end | |||
|cluster_id=chr1:35220613..35220718,+ | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_1_at_GJB5_5end | |||
|id=chr1:35220613..35220718,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.33e-21!254;CL:0002076!3.67e-18!43;CL:0000223!4.63e-13!59;CL:0002251!1.85e-10!21;CL:0002368!1.49e-09!13;CL:0002159!6.70e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.14e-17;42!CL:0002251;1.54e-13;20!CL:0002368;2.54e-12;13!CL:0002159;3.24e-12;14!CL:0000622;7.65e-08;5!CL:0002202;8.51e-08;9!CL:0002632;8.51e-08;9!CL:0000349;8.64e-08;19!CL:0000244;1.99e-07;4!CL:0000731;1.99e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.28e-33,253;CL:0002076,8.95e-24,42;CL:0000223,4.37e-18,58;CL:0002251,1.50e-13,20;CL:0002368,2.32e-12,13;CL:0002159,3.28e-12,14;CL:0000076,4.54e-09,63;CL:0000622,7.55e-08,5;CL:0002202,7.83e-08,9;CL:0002632,7.83e-08,9;CL:0000349,8.68e-08,19;CL:0000244,1.98e-07,4;CL:0000731,1.98e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.18e-09;58!UBERON:0008947;1.98e-07;29 | |||
|ontology_enrichment_disease=DOID:305!6.57e-13!106;DOID:1749!3.31e-10!14;DOID:0050687!6.06e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.44e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.59e-16,106;DOID:1749,4.32e-15,14;DOID:0050687,8.32e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.07e-19!72;UBERON:0004119!7.73e-18!169;UBERON:0000925!7.73e-18!169;UBERON:0006595!7.73e-18!169;UBERON:0000064!1.99e-14!219;UBERON:0000065!6.36e-14!53;UBERON:0000077!3.48e-13!130;UBERON:0001007!3.07e-12!155;UBERON:0001555!3.07e-12!155;UBERON:0007026!3.07e-12!155;UBERON:0000161!1.50e-11!35;UBERON:0004921!1.41e-10!129;UBERON:0004185!1.41e-10!129;UBERON:0000072!1.44e-10!46;UBERON:0008947!4.42e-10!38;UBERON:0003258!4.42e-10!38;UBERON:0000062!4.42e-10!511;UBERON:0000166!2.02e-09!21;UBERON:0005631!3.69e-09!14;UBERON:0000158!3.69e-09!14;UBERON:0001041!5.71e-09!98;UBERON:0007023!9.78e-09!115;UBERON:0000922!1.44e-08!612;UBERON:0001557!2.83e-08!19;UBERON:0000468!4.95e-08!659;UBERON:0000481!6.85e-08!347;UBERON:0000153!1.81e-07!129;UBERON:0007811!1.81e-07!129;UBERON:0002050!2.05e-07!605;UBERON:0005423!2.05e-07!605;UBERON:0000467!3.54e-07!625;UBERON:0003124!3.62e-07!7;UBERON:0000475!3.83e-07!365;UBERON:0000464!3.83e-07!104;UBERON:0000923!3.88e-07!604;UBERON:0005291!3.88e-07!604;UBERON:0006598!3.88e-07!604;UBERON:0002532!3.88e-07!604;UBERON:0001737!3.94e-07!9;UBERON:0000480!4.43e-07!626;UBERON:0004121!6.68e-07!169;UBERON:0000033!7.43e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.82e-11;19!UBERON:0000166;1.82e-11;19!UBERON:0001004;5.95e-11;65!UBERON:0000065;7.63e-11;44!UBERON:0000072;1.13e-10;37!UBERON:0000165;1.96e-10;28!UBERON:0001737;4.42e-10;9!UBERON:0001557;4.42e-10;9!UBERON:0005631;9.25e-09;10!UBERON:0000158;9.25e-09;10!UBERON:0000365;1.62e-08;5!UBERON:0001041;6.57e-08;14!UBERON:0000478;9.42e-08;24!UBERON:0000486;1.02e-07;12!UBERON:0001044;2.66e-07;6!UBERON:0003293;2.66e-07;6!UBERON:0003294;2.66e-07;6!UBERON:0010047;2.66e-07;6!UBERON:0003408;2.66e-07;6!UBERON:0000167;2.66e-07;6!UBERON:0005910;5.87e-07;6!UBERON:0001987;6.40e-07;4!UBERON:0000344;6.69e-07;20!UBERON:0005911;9.63e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.35e-23,160;UBERON:0000925,8.35e-23,160;UBERON:0006595,8.35e-23,160;UBERON:0001004,2.35e-22,74;UBERON:0000065,8.40e-16,54;UBERON:0001007,9.67e-15,145;UBERON:0001555,9.67e-15,145;UBERON:0007026,9.67e-15,145;UBERON:0000161,4.54e-14,36;UBERON:0005631,8.59e-14,14;UBERON:0000158,8.59e-14,14;UBERON:0000072,1.04e-13,47;UBERON:0001041,2.19e-13,87;UBERON:0004921,5.86e-13,118;UBERON:0000166,9.89e-13,22;UBERON:0008947,1.20e-11,38;UBERON:0003258,1.20e-11,38;UBERON:0003102,1.08e-10,99;UBERON:0001557,3.81e-10,19;UBERON:0003124,3.96e-10,7;UBERON:0001737,4.51e-10,9;UBERON:0000165,5.83e-10,29;UBERON:0000930,5.83e-10,29;UBERON:0000365,1.61e-08,5;UBERON:0000478,9.34e-08,24;UBERON:0000033,2.13e-07,56;UBERON:0001044,2.15e-07,6;UBERON:0003293,2.15e-07,6;UBERON:0003294,2.15e-07,6;UBERON:0010047,2.15e-07,6;UBERON:0000167,2.15e-07,6;UBERON:0005910,5.84e-07,6;UBERON:0001987,6.31e-07,4;UBERON:0004340,6.31e-07,4;UBERON:0011216,6.38e-07,223;UBERON:0000344,6.68e-07,20;UBERON:0000153,7.57e-07,62;UBERON:0007811,7.57e-07,62 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.09340350391728,48.2755432407681,44.8403862988371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23852898652861,114.008231835387,127.108897724422,52.1353154335171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,124.588988596049,108.639841735838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.1211617320702,0,0.25326102332916,0.397227542439656,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,2.2818872861778,0.149448680551801,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,117.116077016958,57.0039392034844,83.7469418535891,0,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,7.09840800239063,8.26064981382698,5.06123162755312,9.1543997367887,6.53638332277218,2.37270619111097,7.82021587328954,10.203516186518,4.61696588335668,0,0,0,0,0,0,0,0,0.122988438543114,0,143.772873885299,80.9292623454861,134.708823031585,60.1824893530442,0,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0,0,0,100.295202365851,56.9459414594134,68.0520466763455,59.1981835065827,79.3430652143116,146.835566120276,0,0,0,0.144119953416961,0.25248486685276,0.190493682876507,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61727252471503,0,1.89948683245908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,3.10419213877515,0,0.368738337083406,0,0,0,0,0,0,145.804361865651,121.497870842663,94.6481618121899,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0.348631135379878,0,67.1696675516004,74.4014390602042,0.114814448164607,0,0.524497659837696,1.80479845162965,1.69433741629712,0,0,0.527758144464379,0,0,0,0,0,0,1.52925763827023,0,0,0,0,0,0,0,0.9273691048295,0,0,60.8721470275943,75.4069885402365,0,0,0,0,0,0,0.145016693914229,0,0,54.3787371537618,29.020700172131,16.0792017743176,30.1450186949539,0.464845549297286,0.62962469366128,0,1.23213432070436,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0,0,0,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,67.7403673587605,103.896852708047,55.5344022792745,0.753150406214233,120.110998975273,134.7771805341,194.222407249064,64.0928286577417,0,0,0,0,0,0,0,0,0,0,23.7689009501601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79560539918633,0,0,1.67165076416218,0,109.822462979337,47.5143489332222,121.021316627097,0.994147647766298,1.1253553312841,0,0,0,1.19548792950642,0,0,0,0,0.311039587661807,2.06697207638852,7.33986816169998,0,1.97286811273867,0,0,1.93866549219044,0.371072392647405,0,0,0,0.724999575434793,16.0448762082555,1.77977555204936,10.1646703160213,0,0,0,0.885741385813839,0,0,0.221158519862449,1.47773809476774,0.658156191461918,0.544692317594951,46.5675305890535,9.69573257147843,0,0.69169171316418,0.628303510868405,0.108647371922008,33.4951217718515,8.42697859297133,14.3919389525031,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0,0,27.3930466504926,8.01175252462506,0.789168805698781,0,0,0,0,0,0,0,0,0,1.99226682220855,0.832048038078832,1.38847790668105,36.5511642355629,21.7648016451006,1.92199335066233,0,5.61186721476694,3.14284063470598,5.25538925140539,45.778815782534,0.0882561266915003,6.32746074185491,0,0,1.2029051231617,13.884148174171,0.0801588202515337,4.4825128895264,12.9876246228385,20.3167488187289,0,0,0,0,24.5121796001467,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.321506296930038,0,0.415440338029185,0.449947783103001,3.86900977278975,1.64023802976667,66.4160681446547,0.236417121897595,0.262272940674991,0,0,50.4736968950141,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,44.4033464059503,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,86.8144110567447,0,0,0,0,0.157054096250234,0,0.244052529803926,1.1267183763585,0,0.110929051536852,0.372578417648301,0,2.49960815924213,0,0,0,0,5.21715702998971,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.53168342911599,0,0.300515217994437,2.28483127301277,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,1.389134845943,0,0.179088841081487,11.425653544956,0,0,0.964570191354574,0,0,1.38172136692479,0,0.691292180758654,0,0,0.163565394255844,0,0,39.9379913147805,0,0,0,0,0,86.3056562628972,42.3012536822422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.478901577171454,0.82046545696302,0,2.35134658378341,0.807378228159255,0,25.7147022472687,10.8532145479921,55.2120081550254,15.2493879318446,0,0,0,0.0752103283492573,0.80682027481408,0,0.261906694481422,0.327543835020193,16.1163133976579,2.161202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| ||
|short_description=p1@GJB5 | |||
}} | }} |
Latest revision as of 17:45, 17 September 2015
Short description: | p1@GJB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GJB5_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 0bp_to_ENST00000338513_5end |
EntrezGene: | GJB5 |
HGNC: | 4287 |
UniProt: | O95377 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.28e-33 | 253 |
endo-epithelial cell | 8.95e-24 | 42 |
endodermal cell | 4.37e-18 | 58 |
epithelial cell of alimentary canal | 1.50e-13 | 20 |
respiratory epithelial cell | 2.32e-12 | 13 |
general ecto-epithelial cell | 3.28e-12 | 14 |
squamous epithelial cell | 4.54e-09 | 63 |
acinar cell | 7.55e-08 | 5 |
epithelial cell of tracheobronchial tree | 7.83e-08 | 9 |
epithelial cell of lower respiratory tract | 7.83e-08 | 9 |
extraembryonic cell | 8.68e-08 | 19 |
transitional epithelial cell | 1.98e-07 | 4 |
urothelial cell | 1.98e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.59e-16 | 106 |
squamous cell carcinoma | 4.32e-15 | 14 |
cell type cancer | 8.32e-09 | 143 |